| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043704
Identifier: 78043704
GI number: 78043704
Start: 654337
End: 654996
Strand: Direct
Name: 78043704
Synonym: CHY_0741
Alternate gene names: NA
Gene position: 654337-654996 (Clockwise)
Preceding gene: 78044268
Following gene: 78044601
Centisome position: 27.25
GC content: 39.24
Gene sequence:
>660_bases ATGGTGGAAAAAGCTTTAAAGATTATTTCACCCCTGCAGGGGTTTTTGGATAATGTTGAACCAACTCACGGTTTTCTCCT GAATAAAGCGCTAATTCAATTACAGGAAAAAAACTATAAGACAAGTTATTATGAGAGATACTACCGGCAAATTTACTGCG GCTTATATGCAGCGGATAAAGGCTGGCAAAATGTTACCCATTATTTTAATCCCCGGACCAAGAAAGGTTTGTTTATTTTT TTATCGGCCAAGGAAGCTTTTTACCAGGAGTTAAAAAACTTTCATAAATTTTCCGAACAAAAAAACCCCAAAGCTTTCTG GCATTTCGGCCGGGCGGCACATATCTTGCAGGATCTTTGTGAACCGCATCATTTAAAACCTACCTTTTTAAACGGCCACA AAAAGTTTGAACGCTGGGTGGGAGATAATATAAAGATAATAATAAGGAAACTTTATTTGCCTCCGGCCCTGCGGCCGTGG CTTACCCTGGAGATAGAATCCTTTAGCAGTAAGATCTTGGATTACTACGAATTAGTAGGAGAAAAGGCTGGAGACATTAG TTACTTCCGTGCTGCTCAAGAATTGCTGGCGGCTGCGGTTAAGCTTACCATGGATTTGTTTTTGGAGAATGAAATTTATT TTAGGAAATTTTGGTACTAA
Upstream 100 bases:
>100_bases GGCGGTCCAGTAGAAAAGCTGCGGGCAAACCCGCAGCTTTTTGTATATTAAACCACTGCCTTGCCAAAATATTAATAAAT CCGCTGCCGGAGGCAAGGTG
Downstream 100 bases:
>100_bases AATTCATTGTTTCTACATAACATTTTATTGGGGGCACAAAAGACTTAAAAATTAAAATTTAGCAAGGTTTAATAAGATGC GGCTGGGCAAGGAGACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MVEKALKIISPLQGFLDNVEPTHGFLLNKALIQLQEKNYKTSYYERYYRQIYCGLYAADKGWQNVTHYFNPRTKKGLFIF LSAKEAFYQELKNFHKFSEQKNPKAFWHFGRAAHILQDLCEPHHLKPTFLNGHKKFERWVGDNIKIIIRKLYLPPALRPW LTLEIESFSSKILDYYELVGEKAGDISYFRAAQELLAAAVKLTMDLFLENEIYFRKFWY
Sequences:
>Translated_219_residues MVEKALKIISPLQGFLDNVEPTHGFLLNKALIQLQEKNYKTSYYERYYRQIYCGLYAADKGWQNVTHYFNPRTKKGLFIF LSAKEAFYQELKNFHKFSEQKNPKAFWHFGRAAHILQDLCEPHHLKPTFLNGHKKFERWVGDNIKIIIRKLYLPPALRPW LTLEIESFSSKILDYYELVGEKAGDISYFRAAQELLAAAVKLTMDLFLENEIYFRKFWY >Mature_219_residues MVEKALKIISPLQGFLDNVEPTHGFLLNKALIQLQEKNYKTSYYERYYRQIYCGLYAADKGWQNVTHYFNPRTKKGLFIF LSAKEAFYQELKNFHKFSEQKNPKAFWHFGRAAHILQDLCEPHHLKPTFLNGHKKFERWVGDNIKIIIRKLYLPPALRPW LTLEIESFSSKILDYYELVGEKAGDISYFRAAQELLAAAVKLTMDLFLENEIYFRKFWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26076; Mature: 26076
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEKALKIISPLQGFLDNVEPTHGFLLNKALIQLQEKNYKTSYYERYYRQIYCGLYAADK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC GWQNVTHYFNPRTKKGLFIFLSAKEAFYQELKNFHKFSEQKNPKAFWHFGRAAHILQDLC CHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC EPHHLKPTFLNGHKKFERWVGDNIKIIIRKLYLPPALRPWLTLEIESFSSKILDYYELVG CCCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHC EKAGDISYFRAAQELLAAAVKLTMDLFLENEIYFRKFWY CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MVEKALKIISPLQGFLDNVEPTHGFLLNKALIQLQEKNYKTSYYERYYRQIYCGLYAADK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC GWQNVTHYFNPRTKKGLFIFLSAKEAFYQELKNFHKFSEQKNPKAFWHFGRAAHILQDLC CHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC EPHHLKPTFLNGHKKFERWVGDNIKIIIRKLYLPPALRPWLTLEIESFSSKILDYYELVG CCCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHC EKAGDISYFRAAQELLAAAVKLTMDLFLENEIYFRKFWY CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA