Click here to switch to the map view.

The map label for this gene is yigC [C]

Identifier: 78043702

GI number: 78043702

Start: 596330

End: 597682

Strand: Direct

Name: yigC [C]

Synonym: CHY_0681

Alternate gene names: 78043702

Gene position: 596330-597682 (Clockwise)

Preceding gene: 78042631

Following gene: 78044315

Centisome position: 24.83

GC content: 46.71

Gene sequence:

>1353_bases
TTGGCAGCATCGCTGAGGAGTTTTTTAGAGCAATTAAAACGGCAAAACTCATTATATTTAGTGAAAAAACCGGTAAACCC
CAGATTTGAACTGGGAGCACTCCTGAAAAAAACCAAGGGAACTGTTCCCATGTTTTTTCAAAACATTGAAGGCTACGATG
TACCGGCGGTAGGTGGCATTGTTGGTACCAGGGAAAATTTTGCTCAAGCTTTAAGGATAAACAAATCCGAGTTGTTAGCC
AAAATAACCGAAGCAATCACTAATCCTGGTGAAACCCGGTTACTGCCGTCCGGTCCGGTACAGGAAAATGTCTTGACCAA
AGGTTTTGATATCGGAAAAATGTTTCCAATTCCTACTTTTCACGAAAAAGATTCCGGAGCGTTTATAACAGCGGGTATCG
TTGTAGCCAAAGATCCCATTTACGGACGGCGTTTTACCTCTATTCGCCGGATGCAGTTAAACGGACCCAACAACTTGAGC
ATTTTAATTGAATCGCCGGGGTTAATTGAACAATACTATGAATTTGAAAGACGTGGCCAGGCCATGGAAGTGGCCATAGT
TTTGGGTGTTCACCCGGCCATAACTTTATCCAGCCAACTTCCGACCCAAACCTTTGGTTTAGATAAGTACAATGTGGCCA
GCCGGCTCATAGGCGAGCCGCTTCCGGTGGTAAAATGCAAAACAATTGATTTAGAAGTTCCGGCCGATGCGGAAATAGTG
CTGGAAGGACGGATGTTACCGTATGTTCGTCATCCCGAAGGACCCTTTGGCGAATTAATGGGCTACTACGGACCGCAAAC
AATGCAGCCGGTGGTGGAGGTCACCGCGGTAACCTTCAGAAACAACCCGATTTTCCAAGTTATCTTCCCTTCTAGCTACG
AACATAAATTACCAAATGCTTTGATGCGGGAAGTAGTCTTATTTAACCACGTTCGCCATGTGGTTCCAACGGTTCAAGAT
GTTCACCTAACCATGGCCGGCGGTGGACGCTGCCATGCGATTATTTCCATTAAAAAGACGGCCGAAGGGCAAGGAAAGCA
GGCAATTTTTGCAGCTCTGGCCAGCAATAAGGATGTTAAACACGTAGTGGTGGTTAATGACGATGTAGATATCTTTGATC
CGGAAGATGTAGAATGGGCCATTGCCACCAGGGTGCAAGCGGATCAGGATATAATAATTATCCCCGGGGCGCAGGGGACG
CCACTGGAGCCATCCCACAATTTAAGAGGGGTATCGGCCAAAATGGGAATTGATGCGACCTATCCCCTGGCGGAAGAAGA
ACGATTTGCCCGGACTCAGATTCCGGGATATGACCAAATCCGGTTGGAAGATTACTTAACCCTGGACTGGTAG

Upstream 100 bases:

>100_bases
TTTGGTGGCTTTCATAATAGGGAAAATTTTAGATGCCCTTGCAATTGAACACAATTTGTTTAAACGCTGGGGGGAGTAGT
ACGAGAGGAGGTTTTAACTT

Downstream 100 bases:

>100_bases
GAGGTAATGTTTAATGGGTAATGCAATTGGCTTTGTTGAAACCCGGGGGCTTACAGCAGCAATTGAAGCAGCGGATGCGA
TGGTGAAAGCGGCCAATGTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: ORF-B(T) [H]

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAASLRSFLEQLKRQNSLYLVKKPVNPRFELGALLKKTKGTVPMFFQNIEGYDVPAVGGIVGTRENFAQALRINKSELLA
KITEAITNPGETRLLPSGPVQENVLTKGFDIGKMFPIPTFHEKDSGAFITAGIVVAKDPIYGRRFTSIRRMQLNGPNNLS
ILIESPGLIEQYYEFERRGQAMEVAIVLGVHPAITLSSQLPTQTFGLDKYNVASRLIGEPLPVVKCKTIDLEVPADAEIV
LEGRMLPYVRHPEGPFGELMGYYGPQTMQPVVEVTAVTFRNNPIFQVIFPSSYEHKLPNALMREVVLFNHVRHVVPTVQD
VHLTMAGGGRCHAIISIKKTAEGQGKQAIFAALASNKDVKHVVVVNDDVDIFDPEDVEWAIATRVQADQDIIIIPGAQGT
PLEPSHNLRGVSAKMGIDATYPLAEEERFARTQIPGYDQIRLEDYLTLDW

Sequences:

>Translated_450_residues
MAASLRSFLEQLKRQNSLYLVKKPVNPRFELGALLKKTKGTVPMFFQNIEGYDVPAVGGIVGTRENFAQALRINKSELLA
KITEAITNPGETRLLPSGPVQENVLTKGFDIGKMFPIPTFHEKDSGAFITAGIVVAKDPIYGRRFTSIRRMQLNGPNNLS
ILIESPGLIEQYYEFERRGQAMEVAIVLGVHPAITLSSQLPTQTFGLDKYNVASRLIGEPLPVVKCKTIDLEVPADAEIV
LEGRMLPYVRHPEGPFGELMGYYGPQTMQPVVEVTAVTFRNNPIFQVIFPSSYEHKLPNALMREVVLFNHVRHVVPTVQD
VHLTMAGGGRCHAIISIKKTAEGQGKQAIFAALASNKDVKHVVVVNDDVDIFDPEDVEWAIATRVQADQDIIIIPGAQGT
PLEPSHNLRGVSAKMGIDATYPLAEEERFARTQIPGYDQIRLEDYLTLDW
>Mature_449_residues
AASLRSFLEQLKRQNSLYLVKKPVNPRFELGALLKKTKGTVPMFFQNIEGYDVPAVGGIVGTRENFAQALRINKSELLAK
ITEAITNPGETRLLPSGPVQENVLTKGFDIGKMFPIPTFHEKDSGAFITAGIVVAKDPIYGRRFTSIRRMQLNGPNNLSI
LIESPGLIEQYYEFERRGQAMEVAIVLGVHPAITLSSQLPTQTFGLDKYNVASRLIGEPLPVVKCKTIDLEVPADAEIVL
EGRMLPYVRHPEGPFGELMGYYGPQTMQPVVEVTAVTFRNNPIFQVIFPSSYEHKLPNALMREVVLFNHVRHVVPTVQDV
HLTMAGGGRCHAIISIKKTAEGQGKQAIFAALASNKDVKHVVVVNDDVDIFDPEDVEWAIATRVQADQDIIIIPGAQGTP
LEPSHNLRGVSAKMGIDATYPLAEEERFARTQIPGYDQIRLEDYLTLDW

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=469, Percent_Identity=30.2771855010661, Blast_Score=164, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6320748, Length=455, Percent_Identity=26.1538461538462, Blast_Score=118, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 49879; Mature: 49748

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLRSFLEQLKRQNSLYLVKKPVNPRFELGALLKKTKGTVPMFFQNIEGYDVPAVGGI
CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCE
VGTRENFAQALRINKSELLAKITEAITNPGETRLLPSGPVQENVLTKGFDIGKMFPIPTF
ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHCCCCCCCCCCCCCC
HEKDSGAFITAGIVVAKDPIYGRRFTSIRRMQLNGPNNLSILIESPGLIEQYYEFERRGQ
CCCCCCCEEEEEEEEECCCCCCCHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC
AMEVAIVLGVHPAITLSSQLPTQTFGLDKYNVASRLIGEPLPVVKCKTIDLEVPADAEIV
EEEEEEEEECCCEEEECCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEE
LEGRMLPYVRHPEGPFGELMGYYGPQTMQPVVEVTAVTFRNNPIFQVIFPSSYEHKLPNA
EECCCCCEEECCCCCHHHHHHHCCCCHHHHHEEEEEEEECCCCEEEEECCCCCCCCCHHH
LMREVVLFNHVRHVVPTVQDVHLTMAGGGRCHAIISIKKTAEGQGKQAIFAALASNKDVK
HHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCCEEHHHHHCCCCCE
HVVVVNDDVDIFDPEDVEWAIATRVQADQDIIIIPGAQGTPLEPSHNLRGVSAKMGIDAT
EEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCC
YPLAEEERFARTQIPGYDQIRLEDYLTLDW
CCCCHHHHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
AASLRSFLEQLKRQNSLYLVKKPVNPRFELGALLKKTKGTVPMFFQNIEGYDVPAVGGI
CHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCE
VGTRENFAQALRINKSELLAKITEAITNPGETRLLPSGPVQENVLTKGFDIGKMFPIPTF
ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHCCCCCCCCCCCCCC
HEKDSGAFITAGIVVAKDPIYGRRFTSIRRMQLNGPNNLSILIESPGLIEQYYEFERRGQ
CCCCCCCEEEEEEEEECCCCCCCHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC
AMEVAIVLGVHPAITLSSQLPTQTFGLDKYNVASRLIGEPLPVVKCKTIDLEVPADAEIV
EEEEEEEEECCCEEEECCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEE
LEGRMLPYVRHPEGPFGELMGYYGPQTMQPVVEVTAVTFRNNPIFQVIFPSSYEHKLPNA
EECCCCCEEECCCCCHHHHHHHCCCCHHHHHEEEEEEEECCCCEEEEECCCCCCCCCHHH
LMREVVLFNHVRHVVPTVQDVHLTMAGGGRCHAIISIKKTAEGQGKQAIFAALASNKDVK
HHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCCEEHHHHHCCCCCE
HVVVVNDDVDIFDPEDVEWAIATRVQADQDIIIIPGAQGTPLEPSHNLRGVSAKMGIDAT
EEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCC
YPLAEEERFARTQIPGYDQIRLEDYLTLDW
CCCCHHHHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463; 3936936 [H]