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The map label for this gene is 78043621

Identifier: 78043621

GI number: 78043621

Start: 1668992

End: 1669375

Strand: Direct

Name: 78043621

Synonym: CHY_1862

Alternate gene names: NA

Gene position: 1668992-1669375 (Clockwise)

Preceding gene: 78043691

Following gene: 78043240

Centisome position: 69.5

GC content: 40.62

Gene sequence:

>384_bases
TTGGAAATCAATACTAAAGCTATCGGGCAAAGAATTCGGGAAGAAAGGGAAAAGCTTGAGCTTTCCCGGGAAGAATTTGC
CGAAATTCTCGGGCTTTCGGATTATTACGTAGGACAATTAGAACGGGGAGAGCGGCAAATGAGCCTTCCCGTCTTAGTTA
ACATCGCCCAGTGCTTGCATGTATCTTTAGATTACCTTATCTTTGGAAGTACCCCTTTTGAACCGTCCGGAGTTCAGGAA
AATATTTCATTTTATAATTTTTTGCAAAATCTTGATCCAGAATTGCTAAGCTTGCTTTCTAAATGCTCCCATGATGAATT
GGAATTGTTCAAAAAGCTTATCAAAACCATCCTCCCTTATCTGGGTAAAAAGCCGGTCCCTTAA

Upstream 100 bases:

>100_bases
CATAATTTTATGCTAATTGCCAATAATATTTTTATGCTAATTGCAAATTTTTCTTTATAAAGAATTCCGATAAAGTTATA
TCCACAGGGAGTGAGCAAAC

Downstream 100 bases:

>100_bases
GAGACCGGCTTTTCTACTTATTTTTTAATTTTAACCGTTACCGAAAGCCCCGGAATAAGCCCTTCCGGCTTTTCCAAAAG
CTTAATTTTTACCGGTATCC

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLHVSLDYLIFGSTPFEPSGVQE
NISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPYLGKKPVP

Sequences:

>Translated_127_residues
MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLHVSLDYLIFGSTPFEPSGVQE
NISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPYLGKKPVP
>Mature_127_residues
MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLHVSLDYLIFGSTPFEPSGVQE
NISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPYLGKKPVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14615; Mature: 14615

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLH
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHCHHHHHHHHHHHH
VSLDYLIFGSTPFEPSGVQENISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPY
HHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGKKPVP
HCCCCCC
>Mature Secondary Structure
MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLH
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHCHHHHHHHHHHHH
VSLDYLIFGSTPFEPSGVQENISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPY
HHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGKKPVP
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA