| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043596
Identifier: 78043596
GI number: 78043596
Start: 2262368
End: 2262649
Strand: Direct
Name: 78043596
Synonym: CHY_2531
Alternate gene names: NA
Gene position: 2262368-2262649 (Clockwise)
Preceding gene: 78044750
Following gene: 78044799
Centisome position: 94.21
GC content: 29.43
Gene sequence:
>282_bases ATGGTATTATTAAATCAAGAGGTGATAAGCATGAAAAAAAGCGTAAAAATATTGCAACTAAAGCTTCCTTTTGACCTTGA TAAAAAGTTAGCTGAACTTGCAAAAAAGAATCAAACCAGCAAAAATAAGATAATTGTAGATTTACTTAATAATCAAATAA CGGGATTAGAAGCGAGAAAATTATTAGATGAAATTAAAAACGAAATAAAACCAGAAGATGCACCAGACTGGTTTAATAAG CCTGCTTCTGAATATATTAAGGAGTTAAGGAGTGATGGATAA
Upstream 100 bases:
>100_bases AGAAAAAAATCCTCAACCCACAACCTACCACAGACAACCGATAACTTTTTTGTAGGGTTAAGTTCATTCTGTAGAATAAA TTGTTTGAAATGCCATATTT
Downstream 100 bases:
>100_bases CCAAAATACCTTTTTAAAATTTTTAATTGATAGCTGTATTTTTATTGATTTTTTCGCAGATCGTTTAAGTAGTCTTGAAA AACAAAACTTATACACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MVLLNQEVISMKKSVKILQLKLPFDLDKKLAELAKKNQTSKNKIIVDLLNNQITGLEARKLLDEIKNEIKPEDAPDWFNK PASEYIKELRSDG
Sequences:
>Translated_93_residues MVLLNQEVISMKKSVKILQLKLPFDLDKKLAELAKKNQTSKNKIIVDLLNNQITGLEARKLLDEIKNEIKPEDAPDWFNK PASEYIKELRSDG >Mature_93_residues MVLLNQEVISMKKSVKILQLKLPFDLDKKLAELAKKNQTSKNKIIVDLLNNQITGLEARKLLDEIKNEIKPEDAPDWFNK PASEYIKELRSDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10691; Mature: 10691
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLNQEVISMKKSVKILQLKLPFDLDKKLAELAKKNQTSKNKIIVDLLNNQITGLEARK CCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHH LLDEIKNEIKPEDAPDWFNKPASEYIKELRSDG HHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MVLLNQEVISMKKSVKILQLKLPFDLDKKLAELAKKNQTSKNKIIVDLLNNQITGLEARK CCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHH LLDEIKNEIKPEDAPDWFNKPASEYIKELRSDG HHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA