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The map label for this gene is yvdE [H]

Identifier: 78043532

GI number: 78043532

Start: 633855

End: 634520

Strand: Direct

Name: yvdE [H]

Synonym: CHY_0717

Alternate gene names: 78043532

Gene position: 633855-634520 (Clockwise)

Preceding gene: 78043692

Following gene: 78043381

Centisome position: 26.39

GC content: 45.05

Gene sequence:

>666_bases
ATGTATATAGGAATTCCTGTCTGGCCGGAGGACGGTTTTTATAAAATCCGCCAGAGTTACGTGCAAAAAATACTAAAAAC
AGGGGCTAAACCATTTTTTATTCTCCCGGAGCACGATTTAGCCGGGGTATTTAAGATAATAACGGGAGTTTTAATTCCCG
GAGGTGGGGATATCGCTCCGGAATTGTTTGGTGAAGAACCGCGGCCGGAAATTCGAAGTTACAGCAGGCAAAAAGACTTA
TTTGAAATTAACCTTATTAAAGAAGCACACAAACACGCGTTACCGATTTTAGGAATATGTCGGGGCATGCAGTTAATCGG
GGTAGCTTTTGGGGCCGGTATGTATCAGGACCTTTTTACGGAAAGAAAAGGAGTTTTGGCCCATGAGCAAAAAGCCCCGC
CGCAAGAGCCAACCCACCTGATAACTTTAAGCCCCGAGGGACGTTTAAGGGAAATTTTTGGCGCCGCAAGGGTGCGGGTA
AATAGCTTTCACCACCAGGCATTAAAAAATGCCGGGACGGTTCTTAGCGTTGAAGCGGTTGCGGAAGATGGGGTTATTGA
AGCAATTAGTGGACCGAAAATTTTAGGAGTGCAGTGGCATCCGGAGCTTTTAGAAAGTCATGATGGTTTATTTTTCTGGC
TTATAAAGGAAGGAGGAGCTAAATGA

Upstream 100 bases:

>100_bases
GGAATTAATGCGGAAGGTCAATCAAGCACTGGAAATAAGCCTCGGACTGGTGGAAATTTAGCCTTTTTCCGGGGCTTTAT
TTTTTTAGGGAGGGGGCCCC

Downstream 100 bases:

>100_bases
AGGTTTTAAAAAATGGGGTTATCGTTTTGGCTTCCGGTGAACAGCTTAAAGGAGACCTTTTAATTGATGACGAAGGAAAA
ATTGTTAAAATCGGTGAAGA

Product: putative glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MYIGIPVWPEDGFYKIRQSYVQKILKTGAKPFFILPEHDLAGVFKIITGVLIPGGGDIAPELFGEEPRPEIRSYSRQKDL
FEINLIKEAHKHALPILGICRGMQLIGVAFGAGMYQDLFTERKGVLAHEQKAPPQEPTHLITLSPEGRLREIFGAARVRV
NSFHHQALKNAGTVLSVEAVAEDGVIEAISGPKILGVQWHPELLESHDGLFFWLIKEGGAK

Sequences:

>Translated_221_residues
MYIGIPVWPEDGFYKIRQSYVQKILKTGAKPFFILPEHDLAGVFKIITGVLIPGGGDIAPELFGEEPRPEIRSYSRQKDL
FEINLIKEAHKHALPILGICRGMQLIGVAFGAGMYQDLFTERKGVLAHEQKAPPQEPTHLITLSPEGRLREIFGAARVRV
NSFHHQALKNAGTVLSVEAVAEDGVIEAISGPKILGVQWHPELLESHDGLFFWLIKEGGAK
>Mature_221_residues
MYIGIPVWPEDGFYKIRQSYVQKILKTGAKPFFILPEHDLAGVFKIITGVLIPGGGDIAPELFGEEPRPEIRSYSRQKDL
FEINLIKEAHKHALPILGICRGMQLIGVAFGAGMYQDLFTERKGVLAHEQKAPPQEPTHLITLSPEGRLREIFGAARVRV
NSFHHQALKNAGTVLSVEAVAEDGVIEAISGPKILGVQWHPELLESHDGLFFWLIKEGGAK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=205, Percent_Identity=30.2439024390244, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 24493; Mature: 24493

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIGIPVWPEDGFYKIRQSYVQKILKTGAKPFFILPEHDLAGVFKIITGVLIPGGGDIAP
CEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCH
ELFGEEPRPEIRSYSRQKDLFEINLIKEAHKHALPILGICRGMQLIGVAFGAGMYQDLFT
HHCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
ERKGVLAHEQKAPPQEPTHLITLSPEGRLREIFGAARVRVNSFHHQALKNAGTVLSVEAV
HHCCCHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEH
AEDGVIEAISGPKILGVQWHPELLESHDGLFFWLIKEGGAK
HCCCEEEECCCCEEEEEEECHHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure
MYIGIPVWPEDGFYKIRQSYVQKILKTGAKPFFILPEHDLAGVFKIITGVLIPGGGDIAP
CEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCH
ELFGEEPRPEIRSYSRQKDLFEINLIKEAHKHALPILGICRGMQLIGVAFGAGMYQDLFT
HHCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
ERKGVLAHEQKAPPQEPTHLITLSPEGRLREIFGAARVRVNSFHHQALKNAGTVLSVEAV
HHCCCHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEH
AEDGVIEAISGPKILGVQWHPELLESHDGLFFWLIKEGGAK
HCCCEEEECCCCEEEEEEECHHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]