| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is mtaD [H]
Identifier: 78043497
GI number: 78043497
Start: 612338
End: 613672
Strand: Direct
Name: mtaD [H]
Synonym: CHY_0698
Alternate gene names: 78043497
Gene position: 612338-613672 (Clockwise)
Preceding gene: 78045001
Following gene: 78044033
Centisome position: 25.5
GC content: 46.37
Gene sequence:
>1335_bases ATGTCAATTTTAATTAAAAACGGAACAATTGTAACAATGAACGAAAAACGGGAAATTTTAAAAGGCGATTTATACATCGA GGGAAATATCATTAAGGATATTGGCCCTTCTTTAGATGTTCAGACGGACAAAGTTATCGATGCTGCCGGCAAAGTGGTGA TTCCAGGTCTAATCCAGACCCACATTCACCTCTGCCAAACCCTTTTCCGGGGGCAAGCGGATGATCTGGAACTTTTGGAT TGGTTGAAACTCCGGATCTGGCCTTTAGAAGGAGGACACGATCCCGAATCTCTGTATTATTCGGCAATGCTCGGAATTGG CGAACTGTTTAAAGGCGGAACCACTGCAATTGTCGATATGGCAACGGTTAACCATACCGATTCTAACTTCCAGGCCATTT ATGATAGCGGGATTCGGGCGATTTCCGGAAAGTGCATGATGGATTACGGGACGGAAGTACCCAAGTCCATGCAGGATACT ACCGAAAATGCCATTGATGAAAGCGTGCAGCTCCTGGAAAAATGGCACGGCAAGGACAACGGCCGCATCTTGTACGCGTT TACTCCGCGCTTTGCGGTTTCCTGCACCGAAGATTTATTAAAAGAAGTTGTCAAGTTAGCTGAGCAGTACAAAGTAAGGG TTCACACCCATGCTTCCGAAAATAAAGGAGAAGTGGAGCTTGTCTTAAAGGAAAGAGGCATGAGAAACGTTCTGTACTTA GAAAAGTTAGGGATGACGGCTCCAAACCTGATCCTTGCCCATTGTATTCATTTAGACGAACGGGAAATGAAGGTCTTGGC TGAGTCCAAAACCAAAATTGCCCACTGCCCCTCTTCCAACTTAAAATTAGCATCGGGCATTGCCAAAATTCCCGAGCTTT TAGAAATGGGCGCGGAAATTTCCATCGCCGCCGATGGCGCTCCGTGCAACAATAACCTGGATGCCTTTATTGAGATGCGG ATGGCCGCACTGATTCAAAAGCCGTTCTACGGTCCAACTTCAATGCCTGCCCAGAAAGTTTTTGAATTAGCTACCATTGG CGGTGCCCGGGCTATGGGTCTGGAAGACCAAATTGGCAGCCTGGAAGTGGGTAAAAAAGCAGACGTGGTCATTGTAGACC TGGATGAAATGAGAACGACCCCAAACGAAGGGGTAAATATATACACCCAGCTCGTTTATCAAGCCCAGAGCAGTAATGTT TTAACGACCATTGTTGACGGTAAAATCGTAATGGAGAACCGGGTCTTAAAGACCATGGATGAGGTGGAAGTACGCCGGAA AGCCAACGAAAGCTTAAAACGAGTAGCTGACCGGGTTGGGGTTAGCTTAGAATAG
Upstream 100 bases:
>100_bases GAAAGGCCAGGCGTAATGCCTGGTCTTTAATCCTTGTGAGAAAAGTTGCAAATTTAATTTACAATGCCAGGCCCAAACTG TTTTCAAGGGAGTGACTGCC
Downstream 100 bases:
>100_bases GTGAGAGCGATGAAACCGATAAAGGATTTGGTGGAAGTAGCGTTGGGGAAAAAGCCTGCGGACCTGGTTTTAAAAAATGC TCAAGTGTTTAATAGCTTTA
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSILIKNGTIVTMNEKREILKGDLYIEGNIIKDIGPSLDVQTDKVIDAAGKVVIPGLIQTHIHLCQTLFRGQADDLELLD WLKLRIWPLEGGHDPESLYYSAMLGIGELFKGGTTAIVDMATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQDT TENAIDESVQLLEKWHGKDNGRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKERGMRNVLYL EKLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKIPELLEMGAEISIAADGAPCNNNLDAFIEMR MAALIQKPFYGPTSMPAQKVFELATIGGARAMGLEDQIGSLEVGKKADVVIVDLDEMRTTPNEGVNIYTQLVYQAQSSNV LTTIVDGKIVMENRVLKTMDEVEVRRKANESLKRVADRVGVSLE
Sequences:
>Translated_444_residues MSILIKNGTIVTMNEKREILKGDLYIEGNIIKDIGPSLDVQTDKVIDAAGKVVIPGLIQTHIHLCQTLFRGQADDLELLD WLKLRIWPLEGGHDPESLYYSAMLGIGELFKGGTTAIVDMATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQDT TENAIDESVQLLEKWHGKDNGRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKERGMRNVLYL EKLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKIPELLEMGAEISIAADGAPCNNNLDAFIEMR MAALIQKPFYGPTSMPAQKVFELATIGGARAMGLEDQIGSLEVGKKADVVIVDLDEMRTTPNEGVNIYTQLVYQAQSSNV LTTIVDGKIVMENRVLKTMDEVEVRRKANESLKRVADRVGVSLE >Mature_443_residues SILIKNGTIVTMNEKREILKGDLYIEGNIIKDIGPSLDVQTDKVIDAAGKVVIPGLIQTHIHLCQTLFRGQADDLELLDW LKLRIWPLEGGHDPESLYYSAMLGIGELFKGGTTAIVDMATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQDTT ENAIDESVQLLEKWHGKDNGRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKERGMRNVLYLE KLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKIPELLEMGAEISIAADGAPCNNNLDAFIEMRM AALIQKPFYGPTSMPAQKVFELATIGGARAMGLEDQIGSLEVGKKADVVIVDLDEMRTTPNEGVNIYTQLVYQAQSSNVL TTIVDGKIVMENRVLKTMDEVEVRRKANESLKRVADRVGVSLE
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=336, Percent_Identity=33.6309523809524, Blast_Score=168, Evalue=1e-41, Organism=Escherichia coli, GI1789249, Length=390, Percent_Identity=33.0769230769231, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI87082177, Length=464, Percent_Identity=24.7844827586207, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540282, Length=421, Percent_Identity=23.2779097387173, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319963, Length=378, Percent_Identity=27.7777777777778, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI24643849, Length=387, Percent_Identity=26.3565891472868, Blast_Score=143, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 49042; Mature: 48911
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILIKNGTIVTMNEKREILKGDLYIEGNIIKDIGPSLDVQTDKVIDAAGKVVIPGLIQT CEEEEECCEEEEECCCHHHHCCCEEEECCCHHHCCCCCCCCHHHHHHCCCCEEECHHHHH HIHLCQTLFRGQADDLELLDWLKLRIWPLEGGHDPESLYYSAMLGIGELFKGGTTAIVDM HHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE ATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQDTTENAIDESVQLLEKWHGKDN EEECCCCCCHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKERGMRNVLYL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCHHHHH EKLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKIPELLEMGAEI HHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCE SIAADGAPCNNNLDAFIEMRMAALIQKPFYGPTSMPAQKVFELATIGGARAMGLEDQIGS EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC LEVGKKADVVIVDLDEMRTTPNEGVNIYTQLVYQAQSSNVLTTIVDGKIVMENRVLKTMD CCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHH EVEVRRKANESLKRVADRVGVSLE HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SILIKNGTIVTMNEKREILKGDLYIEGNIIKDIGPSLDVQTDKVIDAAGKVVIPGLIQT EEEEECCEEEEECCCHHHHCCCEEEECCCHHHCCCCCCCCHHHHHHCCCCEEECHHHHH HIHLCQTLFRGQADDLELLDWLKLRIWPLEGGHDPESLYYSAMLGIGELFKGGTTAIVDM HHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE ATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQDTTENAIDESVQLLEKWHGKDN EEECCCCCCHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKERGMRNVLYL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCHHHHH EKLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKIPELLEMGAEI HHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCE SIAADGAPCNNNLDAFIEMRMAALIQKPFYGPTSMPAQKVFELATIGGARAMGLEDQIGS EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC LEVGKKADVVIVDLDEMRTTPNEGVNIYTQLVYQAQSSNVLTTIVDGKIVMENRVLKTMD CCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHH EVEVRRKANESLKRVADRVGVSLE HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA