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The map label for this gene is tnpA1 [H]

Identifier: 78043375

GI number: 78043375

Start: 515225

End: 515641

Strand: Direct

Name: tnpA1 [H]

Synonym: CHY_0598

Alternate gene names: 78043375

Gene position: 515225-515641 (Clockwise)

Preceding gene: 78044261

Following gene: 78043603

Centisome position: 21.45

GC content: 53.96

Gene sequence:

>417_bases
TTGTGGTATAATAATTTTATGAAGCGCAAATTTAAGTCCAACAACAATATCATGTATTCTTGCAAATACCATGTAGTCTG
GTGCCCGAAATACCGGCGTCCCGTCCTGAAAGATGGAGTAGACGTGCGGCTCAAAGAGATCCTCTTTGAAGTGGCACGGG
AGAAAAGGGCCGAAATTATTGAATTGGAGGTCATGCCGGACCACGTCCACCTGCTGGTAGAGGTGGACCCGCAGTTCGGC
ATCCACCGGCTGGTGAAGCTCATGAAGGGCCGGTCCTCCCGCATCCTACGCCAGGAGTTCCCGTGGCTCAGGTCGAGGCT
GCCGACCCTCTGGACCAACAGCTACTTCGTGGCTACCGTTGGAGGTGCGCCCCGTGCCACCCTACGCGAGTACATCGAGA
AGCAAAAGTACGTCTAG

Upstream 100 bases:

>100_bases
AATATAGGCAAATTGACCGAAAAACGGCCGCCGCAGGCCCCGCCCTTTAGGGCTGGGGATAAGGCGGCCAAATTTTTATG
GGCTACAATTATATTGCCGC

Downstream 100 bases:

>100_bases
CACGCCCAGCTTCGTGTGCGAGCTCCTCCTGCGGGTCTCTCCCGCCCAGGAGAAAGCCTTGCTGGCCCGCCTGGAGGCAG
CCCGGCAGCTCTACAACGCC

Product: ISChy9, transposase orfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFEVAREKRAEIIELEVMPDHVHLLVEVDPQFG
IHRLVKLMKGRSSRILRQEFPWLRSRLPTLWTNSYFVATVGGAPRATLREYIEKQKYV

Sequences:

>Translated_138_residues
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFEVAREKRAEIIELEVMPDHVHLLVEVDPQFG
IHRLVKLMKGRSSRILRQEFPWLRSRLPTLWTNSYFVATVGGAPRATLREYIEKQKYV
>Mature_138_residues
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFEVAREKRAEIIELEVMPDHVHLLVEVDPQFG
IHRLVKLMKGRSSRILRQEFPWLRSRLPTLWTNSYFVATVGGAPRATLREYIEKQKYV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 16643; Mature: 16643

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFEVAREKRAEII
CCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCEE
ELEVMPDHVHLLVEVDPQFGIHRLVKLMKGRSSRILRQEFPWLRSRLPTLWTNSYFVATV
EEEEECCEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHCHHHHHCCCHHCCCCEEEEEE
GGAPRATLREYIEKQKYV
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFEVAREKRAEII
CCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCEE
ELEVMPDHVHLLVEVDPQFGIHRLVKLMKGRSSRILRQEFPWLRSRLPTLWTNSYFVATV
EEEEECCEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHCHHHHHCCCHHCCCCEEEEEE
GGAPRATLREYIEKQKYV
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]