| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yiaY [H]
Identifier: 78043360
GI number: 78043360
Start: 816099
End: 817250
Strand: Direct
Name: yiaY [H]
Synonym: CHY_0925
Alternate gene names: 78043360
Gene position: 816099-817250 (Clockwise)
Preceding gene: 78043182
Following gene: 78044153
Centisome position: 33.98
GC content: 42.27
Gene sequence:
>1152_bases ATGAAGACGTACCGTTTTTACATGCCGCCGGTTAGCCTAATGGGTATTGGCTGCCTGAAAGAGGCCGGCGAGGAAATTAA AAAGCTCGGTTTTAAAAAAGCTCTTATTGTAACCGATAAGGTACTGGTTAAGATTGGTCTTGTTAATAAGTTAACCGAAA TCCTGGACAACGAAGGAATCGAGTACGTTATTTTTGATGAAACTAAACCAAATCCTACGGTTAAAAATGTTGAAGATGGT CTTAAAATGTTAAAAGAGAACAACTGTGATTTTTTAATTTCCTTTGGTGGAGGTTCGCCTCATGACTGTGCCAAAGGCAT TGGGCTGGTGGCAACTAATGGTGGCTCCATCAAGGATTATGAAGGGGTAAATAAGTCGGCTAAACCCATGTTACCTCTGG TGGCGGTAAACACTACTGCTGGTACCGCAAGTGAAATGACGAGATTTTCAATAATAACCGACGAGGATAGACACGTAAAG ATGGCCATTGTCGACTGGCATGTAACTCCGATAATGGCTGTTAACGATCCCGAATTAATGGTAGAGATGCCAAAAGCTTT AACTGCCGCAACGGGTATGGATGCCTTAACCCATGCTATTGAAGCTTACGTATCTATTGATGCAACTCCGGTTACCGACG CGGCAGCTTTAAAGGCAATCGAGCTTATTTTTAAATACCTGAAACGGGCAGTAGAAAATGGAAAGGATATTGAGGCAAGG GATAAAATGGCTTATGCGGAGTATTTAGCCGGGGTAGCCTTTAACAATGCAGGCTTAGGATATGTACACGCGATGGCCCA CCAGCTGGGAGGGTTTTACGATCTTCCTCATGGTGTGTGTAATGCTGTATTGCTACCTCATGTGCAGGCCTATAATCTGC AGGTTGTACCCGAAAGGTTTATTGATATAGCTAAGGCAATGGGAATAAATGTAGAAAACTTAACGGCAAAAGAAGCTGGA GAAAAGGTACTTGAAGCAATTAAAAATCTTTCGCGGGAAATTGGCATACCATCGGGTCTTAAGGAATTAGGAGTTAAGGA AGAGGATCTTAAGACTTTAGCCGAAAATGCCCTGAAAGATGCTTGCGGATTTACCAATCCAAAGCAGGCGAGCTTAGATG ATATTATACGGATATTTAAAGAAGCAATGTAA
Upstream 100 bases:
>100_bases ATTTTGGGTTATTTTTTGCAAAAACGGGTTAGATTCGGCGTTTTTTGCTTGTTATAATTTTATCAAACTTTAAAAATAAA ATGAATAGGAGGTTATAAAA
Downstream 100 bases:
>100_bases TTTTAACTGCATCGATAGACTTTTTGCCGTTTAATATTCGCCAATACTTCGGGTATTGGCGAATTTCTTTGCCTCTGGCA TTTACCCGTTGAATCCTAAT
Product: putative lactaldehyde reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MKTYRFYMPPVSLMGIGCLKEAGEEIKKLGFKKALIVTDKVLVKIGLVNKLTEILDNEGIEYVIFDETKPNPTVKNVEDG LKMLKENNCDFLISFGGGSPHDCAKGIGLVATNGGSIKDYEGVNKSAKPMLPLVAVNTTAGTASEMTRFSIITDEDRHVK MAIVDWHVTPIMAVNDPELMVEMPKALTAATGMDALTHAIEAYVSIDATPVTDAAALKAIELIFKYLKRAVENGKDIEAR DKMAYAEYLAGVAFNNAGLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNLQVVPERFIDIAKAMGINVENLTAKEAG EKVLEAIKNLSREIGIPSGLKELGVKEEDLKTLAENALKDACGFTNPKQASLDDIIRIFKEAM
Sequences:
>Translated_383_residues MKTYRFYMPPVSLMGIGCLKEAGEEIKKLGFKKALIVTDKVLVKIGLVNKLTEILDNEGIEYVIFDETKPNPTVKNVEDG LKMLKENNCDFLISFGGGSPHDCAKGIGLVATNGGSIKDYEGVNKSAKPMLPLVAVNTTAGTASEMTRFSIITDEDRHVK MAIVDWHVTPIMAVNDPELMVEMPKALTAATGMDALTHAIEAYVSIDATPVTDAAALKAIELIFKYLKRAVENGKDIEAR DKMAYAEYLAGVAFNNAGLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNLQVVPERFIDIAKAMGINVENLTAKEAG EKVLEAIKNLSREIGIPSGLKELGVKEEDLKTLAENALKDACGFTNPKQASLDDIIRIFKEAM >Mature_383_residues MKTYRFYMPPVSLMGIGCLKEAGEEIKKLGFKKALIVTDKVLVKIGLVNKLTEILDNEGIEYVIFDETKPNPTVKNVEDG LKMLKENNCDFLISFGGGSPHDCAKGIGLVATNGGSIKDYEGVNKSAKPMLPLVAVNTTAGTASEMTRFSIITDEDRHVK MAIVDWHVTPIMAVNDPELMVEMPKALTAATGMDALTHAIEAYVSIDATPVTDAAALKAIELIFKYLKRAVENGKDIEAR DKMAYAEYLAGVAFNNAGLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNLQVVPERFIDIAKAMGINVENLTAKEAG EKVLEAIKNLSREIGIPSGLKELGVKEEDLKTLAENALKDACGFTNPKQASLDDIIRIFKEAM
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=408, Percent_Identity=27.9411764705882, Blast_Score=160, Evalue=1e-39, Organism=Escherichia coli, GI48994951, Length=383, Percent_Identity=61.3577023498694, Blast_Score=500, Evalue=1e-143, Organism=Escherichia coli, GI1789163, Length=385, Percent_Identity=43.8961038961039, Blast_Score=339, Evalue=2e-94, Organism=Escherichia coli, GI87082107, Length=377, Percent_Identity=37.9310344827586, Blast_Score=256, Evalue=1e-69, Organism=Escherichia coli, GI1787493, Length=398, Percent_Identity=33.9195979899498, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1789386, Length=365, Percent_Identity=23.8356164383562, Blast_Score=92, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17537053, Length=423, Percent_Identity=28.1323877068558, Blast_Score=162, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6321181, Length=379, Percent_Identity=55.6728232189974, Blast_Score=421, Evalue=1e-119, Organism=Drosophila melanogaster, GI24657991, Length=421, Percent_Identity=27.3159144893112, Blast_Score=155, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 41601; Mature: 41601
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYRFYMPPVSLMGIGCLKEAGEEIKKLGFKKALIVTDKVLVKIGLVNKLTEILDNEGI CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EYVIFDETKPNPTVKNVEDGLKMLKENNCDFLISFGGGSPHDCAKGIGLVATNGGSIKDY EEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCCC EGVNKSAKPMLPLVAVNTTAGTASEMTRFSIITDEDRHVKMAIVDWHVTPIMAVNDPELM CCCCCCCCCCCEEEEEECCCCCHHHHHEEEEEECCCCEEEEEEEEEECCEEEEECCHHHH VEMPKALTAATGMDALTHAIEAYVSIDATPVTDAAALKAIELIFKYLKRAVENGKDIEAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH DKMAYAEYLAGVAFNNAGLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNLQVVPERF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCEEECHHHH IDIAKAMGINVENLTAKEAGEKVLEAIKNLSREIGIPSGLKELGVKEEDLKTLAENALKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHH ACGFTNPKQASLDDIIRIFKEAM HHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKTYRFYMPPVSLMGIGCLKEAGEEIKKLGFKKALIVTDKVLVKIGLVNKLTEILDNEGI CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EYVIFDETKPNPTVKNVEDGLKMLKENNCDFLISFGGGSPHDCAKGIGLVATNGGSIKDY EEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCCC EGVNKSAKPMLPLVAVNTTAGTASEMTRFSIITDEDRHVKMAIVDWHVTPIMAVNDPELM CCCCCCCCCCCEEEEEECCCCCHHHHHEEEEEECCCCEEEEEEEEEECCEEEEECCHHHH VEMPKALTAATGMDALTHAIEAYVSIDATPVTDAAALKAIELIFKYLKRAVENGKDIEAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH DKMAYAEYLAGVAFNNAGLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNLQVVPERF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCEEECHHHH IDIAKAMGINVENLTAKEAGEKVLEAIKNLSREIGIPSGLKELGVKEEDLKTLAENALKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHH ACGFTNPKQASLDDIIRIFKEAM HHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 7768815 [H]