| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is paaY [C]
Identifier: 78043157
GI number: 78043157
Start: 1144103
End: 1144642
Strand: Direct
Name: paaY [C]
Synonym: CHY_1284
Alternate gene names: 78043157
Gene position: 1144103-1144642 (Clockwise)
Preceding gene: 78045057
Following gene: 78043191
Centisome position: 47.64
GC content: 36.85
Gene sequence:
>540_bases TTGTATCCTAACCCTTTTGGCAACTATCCGGTGATCGGTAGAAATACTTATGTTCACCCCTCTGCTCAAATAATTGGTCG GGTGGAGATAGGAGAAAATTGTTTTATAGGGCCCAATGCTGTTATTCGCGCAGATGAGCCGGAAAAAGGGAAAGTAAGCC CAATAATAATAGGTAACAATGTTAATGTGCAGGATGGAGTAATCATCCATGCTTTAGCGGGAACTGAAGTAAGAATTGGT AATAATGTTTCCCTAGCTCATGGAGCAATCATCCATGGTCCAGTAGTAATTAAAGAAAACTGTTTTGTTGGTTTTGGTGC ACTGGTGTTTAAAGCGGTTTTAAATGAATGGGTATTTGTAGGACATAGGGCAGTAGTTCAGGAAAGGGAAATTGAAAGAG AAAAATTTGTGCCTGAAGGAGTAATTTTGACTACTGAGTATTCTTTACCAGTACTTTCTTCCGAACAAAAAGAATTTATT AAAAAAGTTTGCCGGATAAATTTGATTTTAACAAAACAATACTTGTTAAGTGACAAATAA
Upstream 100 bases:
>100_bases CCGCTTAAAGAAATTTATGATTTGGTAAAGTTCCGTGCTTATCAGAGGTTAACGTAAATTAATTTTTAGGTCAGATTAAA ATGAGAGGGGGAAAAAATTG
Downstream 100 bases:
>100_bases TCCTTTTAGATTGGGCCATCTTTACAACCTTTTGTTAGAATTAAAGTTAAAACAAAACAAAAATATTCATTAAGGATGAA AAATGTCTCGAAATAATATA
Product: hexapeptide transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI KKVCRINLILTKQYLLSDK
Sequences:
>Translated_179_residues MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI KKVCRINLILTKQYLLSDK >Mature_179_residues MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI KKVCRINLILTKQYLLSDK
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=124, Percent_Identity=33.0645161290323, Blast_Score=74, Evalue=5e-15, Organism=Escherichia coli, GI87081681, Length=134, Percent_Identity=32.8358208955224, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19759; Mature: 19759
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNN CCCCCCCCCCEECCCEEECCCHHEEEEEEECCEEEECCCEEEECCCCCCCCCCEEEECCC VNVQDGVIIHALAGTEVRIGNNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFV CCCCCCEEEEEECCCEEEECCCEEECCCEEEECCEEEECCCEEEHHHHHHHHHHHHHHHH GHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFIKKVCRINLILTKQYLLSDK CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEHHHHCCC >Mature Secondary Structure MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNN CCCCCCCCCCEECCCEEECCCHHEEEEEEECCEEEECCCEEEECCCCCCCCCCEEEECCC VNVQDGVIIHALAGTEVRIGNNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFV CCCCCCEEEEEECCCEEEECCCEEECCCEEEECCEEEECCCEEEHHHHHHHHHHHHHHHH GHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFIKKVCRINLILTKQYLLSDK CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]