Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is paaY [C]

Identifier: 78043157

GI number: 78043157

Start: 1144103

End: 1144642

Strand: Direct

Name: paaY [C]

Synonym: CHY_1284

Alternate gene names: 78043157

Gene position: 1144103-1144642 (Clockwise)

Preceding gene: 78045057

Following gene: 78043191

Centisome position: 47.64

GC content: 36.85

Gene sequence:

>540_bases
TTGTATCCTAACCCTTTTGGCAACTATCCGGTGATCGGTAGAAATACTTATGTTCACCCCTCTGCTCAAATAATTGGTCG
GGTGGAGATAGGAGAAAATTGTTTTATAGGGCCCAATGCTGTTATTCGCGCAGATGAGCCGGAAAAAGGGAAAGTAAGCC
CAATAATAATAGGTAACAATGTTAATGTGCAGGATGGAGTAATCATCCATGCTTTAGCGGGAACTGAAGTAAGAATTGGT
AATAATGTTTCCCTAGCTCATGGAGCAATCATCCATGGTCCAGTAGTAATTAAAGAAAACTGTTTTGTTGGTTTTGGTGC
ACTGGTGTTTAAAGCGGTTTTAAATGAATGGGTATTTGTAGGACATAGGGCAGTAGTTCAGGAAAGGGAAATTGAAAGAG
AAAAATTTGTGCCTGAAGGAGTAATTTTGACTACTGAGTATTCTTTACCAGTACTTTCTTCCGAACAAAAAGAATTTATT
AAAAAAGTTTGCCGGATAAATTTGATTTTAACAAAACAATACTTGTTAAGTGACAAATAA

Upstream 100 bases:

>100_bases
CCGCTTAAAGAAATTTATGATTTGGTAAAGTTCCGTGCTTATCAGAGGTTAACGTAAATTAATTTTTAGGTCAGATTAAA
ATGAGAGGGGGAAAAAATTG

Downstream 100 bases:

>100_bases
TCCTTTTAGATTGGGCCATCTTTACAACCTTTTGTTAGAATTAAAGTTAAAACAAAACAAAAATATTCATTAAGGATGAA
AAATGTCTCGAAATAATATA

Product: hexapeptide transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG
NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI
KKVCRINLILTKQYLLSDK

Sequences:

>Translated_179_residues
MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG
NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI
KKVCRINLILTKQYLLSDK
>Mature_179_residues
MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNNVNVQDGVIIHALAGTEVRIG
NNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFVGHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFI
KKVCRINLILTKQYLLSDK

Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=124, Percent_Identity=33.0645161290323, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI87081681, Length=134, Percent_Identity=32.8358208955224, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 19759; Mature: 19759

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNN
CCCCCCCCCCEECCCEEECCCHHEEEEEEECCEEEECCCEEEECCCCCCCCCCEEEECCC
VNVQDGVIIHALAGTEVRIGNNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFV
CCCCCCEEEEEECCCEEEECCCEEECCCEEEECCEEEECCCEEEHHHHHHHHHHHHHHHH
GHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFIKKVCRINLILTKQYLLSDK
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEHHHHCCC
>Mature Secondary Structure
MYPNPFGNYPVIGRNTYVHPSAQIIGRVEIGENCFIGPNAVIRADEPEKGKVSPIIIGNN
CCCCCCCCCCEECCCEEECCCHHEEEEEEECCEEEECCCEEEECCCCCCCCCCEEEECCC
VNVQDGVIIHALAGTEVRIGNNVSLAHGAIIHGPVVIKENCFVGFGALVFKAVLNEWVFV
CCCCCCEEEEEECCCEEEECCCEEECCCEEEECCEEEECCCEEEHHHHHHHHHHHHHHHH
GHRAVVQEREIEREKFVPEGVILTTEYSLPVLSSEQKEFIKKVCRINLILTKQYLLSDK
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041719; 8665839; 10924115 [H]