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The map label for this gene is rsmI [H]

Identifier: 78043091

GI number: 78043091

Start: 44242

End: 45051

Strand: Direct

Name: rsmI [H]

Synonym: CHY_0055

Alternate gene names: 78043091

Gene position: 44242-45051 (Clockwise)

Preceding gene: 78043617

Following gene: 78043675

Centisome position: 1.84

GC content: 46.17

Gene sequence:

>810_bases
ATGGGAACCTTATATTTGGTACCGACACCCCTTGGCAACTTAAAAGATATTACCTTAAGGGCGTTAGATACCTTAAAAGA
AGTAGATATCATAGCCGCCGAAGACACCCGGCATACTTTGAAGCTTCTAAACCATTATGAAATAAAAAAACCCCTTCTAT
CCTACCACGAACACAACCGCCGGGAAGCGGGGAAAAAAATTCTTGAACTTTTAGCCCAGGGGAAACAAGTGGCTTTGGTA
ACCGATGCCGGAACTCCAGGCATTTCCGACCCGGGAGAGGATATCGTGCGGGAAGCACTAAAGGAAGGGTATAAGGTTGA
GGCACTTCCGGGAGCTTCGGCTTTAATTGTGGCCCTGGCGGCCAGCGGCCTTACTACTTCCCGCTTTTGCTTTGAAGGAT
TTTTACCCCGAAAAGCCGGGGATCGGGAGAAATGGTTACGGGAACTTTCCCGGGAAAGACGAACCATGATTTTTTACGAA
GCCCCCCACAGGCTTCTTAAGACTTTGGAAGATTTAGCAAAACATTTTGGAGAAAATCGCCGGATGGTGGTAGCCCGGGA
GCTTACCAAAATCCATGAAGAGTATATCCGGGGAAGCATTGCCGAGGTTCTCTCCCATTTTAAAGAAAAAGAGCCCAAAG
GCGAGTTTGTGTTGGTGGTAGAAGGAGCACCACCGGAAGAAAAAAACGTGGAGGAATTTGTGCGGGAATGTATCGAAAGA
GGTTTATCCCAGAAAGAGGCAGTTTTACTTGGCCGCGAACTTGGCTTTAAGAAAAAAGAAATTTATAAATTGTATCTTCA
ATTGAAGTAG

Upstream 100 bases:

>100_bases
GGAGCCGGCGCAAATTAGAGTTTTTAGCTCCTTTGTGGGTTTATGAAAAAGACGGTCAATATTCCGAACAGGTGCGCCGG
ATTTTTGAGGGGGAAGAGTA

Downstream 100 bases:

>100_bases
CAGTTTCGGGACAGTTCCTAAAATTATACTTAAAGTATAAAAAGAGGGACTGTCCCTTTTTTTATCTAATAAAATCGGCC
TTTTTGGTAAACGCTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MGTLYLVPTPLGNLKDITLRALDTLKEVDIIAAEDTRHTLKLLNHYEIKKPLLSYHEHNRREAGKKILELLAQGKQVALV
TDAGTPGISDPGEDIVREALKEGYKVEALPGASALIVALAASGLTTSRFCFEGFLPRKAGDREKWLRELSRERRTMIFYE
APHRLLKTLEDLAKHFGENRRMVVARELTKIHEEYIRGSIAEVLSHFKEKEPKGEFVLVVEGAPPEEKNVEEFVRECIER
GLSQKEAVLLGRELGFKKKEIYKLYLQLK

Sequences:

>Translated_269_residues
MGTLYLVPTPLGNLKDITLRALDTLKEVDIIAAEDTRHTLKLLNHYEIKKPLLSYHEHNRREAGKKILELLAQGKQVALV
TDAGTPGISDPGEDIVREALKEGYKVEALPGASALIVALAASGLTTSRFCFEGFLPRKAGDREKWLRELSRERRTMIFYE
APHRLLKTLEDLAKHFGENRRMVVARELTKIHEEYIRGSIAEVLSHFKEKEPKGEFVLVVEGAPPEEKNVEEFVRECIER
GLSQKEAVLLGRELGFKKKEIYKLYLQLK
>Mature_268_residues
GTLYLVPTPLGNLKDITLRALDTLKEVDIIAAEDTRHTLKLLNHYEIKKPLLSYHEHNRREAGKKILELLAQGKQVALVT
DAGTPGISDPGEDIVREALKEGYKVEALPGASALIVALAASGLTTSRFCFEGFLPRKAGDREKWLRELSRERRTMIFYEA
PHRLLKTLEDLAKHFGENRRMVVARELTKIHEEYIRGSIAEVLSHFKEKEPKGEFVLVVEGAPPEEKNVEEFVRECIERG
LSQKEAVLLGRELGFKKKEIYKLYLQLK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=231, Percent_Identity=49.7835497835498, Blast_Score=225, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30582; Mature: 30451

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLYLVPTPLGNLKDITLRALDTLKEVDIIAAEDTRHTLKLLNHYEIKKPLLSYHEHNR
CCEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
REAGKKILELLAQGKQVALVTDAGTPGISDPGEDIVREALKEGYKVEALPGASALIVALA
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHH
ASGLTTSRFCFEGFLPRKAGDREKWLRELSRERRTMIFYEAPHRLLKTLEDLAKHFGENR
HCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCC
RMVVARELTKIHEEYIRGSIAEVLSHFKEKEPKGEFVLVVEGAPPEEKNVEEFVRECIER
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
GLSQKEAVLLGRELGFKKKEIYKLYLQLK
CCCHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GTLYLVPTPLGNLKDITLRALDTLKEVDIIAAEDTRHTLKLLNHYEIKKPLLSYHEHNR
CEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
REAGKKILELLAQGKQVALVTDAGTPGISDPGEDIVREALKEGYKVEALPGASALIVALA
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHH
ASGLTTSRFCFEGFLPRKAGDREKWLRELSRERRTMIFYEAPHRLLKTLEDLAKHFGENR
HCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCC
RMVVARELTKIHEEYIRGSIAEVLSHFKEKEPKGEFVLVVEGAPPEEKNVEEFVRECIER
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
GLSQKEAVLLGRELGFKKKEIYKLYLQLK
CCCHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]