Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78043071

Identifier: 78043071

GI number: 78043071

Start: 61166

End: 61600

Strand: Direct

Name: 78043071

Synonym: CHY_0070

Alternate gene names: NA

Gene position: 61166-61600 (Clockwise)

Preceding gene: 78044032

Following gene: 78043490

Centisome position: 2.55

GC content: 29.89

Gene sequence:

>435_bases
TTGGATGAAAAATTATTAACCCAGATAAGGTTTCTAAAAAAGTATTTAAATCTTTTAAAAGATATGGCCCAAAAGAGTAA
AAAGGAATATTTAGAAGATTTTATATATAAAGGAGCTGTTGAAAGATATCTGCAGCTGGCCATTGAATGCTGTATCAATA
TTGGCAATAGAATTATTTCCCTCGAACAGTTTAAATATGATTTAACTCCGCCGGAAACTTATGCGGAAGTATTTGAAAAG
CTTCAAAAAATCGGGTTAATAGAGGAAAACTTAAGCACAAAACTTAAAACGATGACTCAGTTTCGTAATAAACTTGTTCA
TGTTTACTGGGAAATTGATGATGCTGTGGTTTATGATATTTTGCAGAATAATTTAAAGGATATCGAAGAATTTTTAAAAA
TTGCTATAAAGTATGTTCAGAGTGAAGGGAAATAA

Upstream 100 bases:

>100_bases
TTAGTTGATTTTGAAGCGGATGTGGTTTTAAAGTACTTAGATATTAAACCTCTGCGGGATGAATTTAACCGGGAGTTTAT
CAAAAGAGCGGGTGAATATC

Downstream 100 bases:

>100_bases
AAGTAATTAGGATTCCGGAACTCGAAATGAAAGAACGGGTAAAAGAGAGGAATATTGTATACCTATTTCAAACCGGTTGA
CGGAAATGACCGCTTAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDEKLLTQIRFLKKYLNLLKDMAQKSKKEYLEDFIYKGAVERYLQLAIECCINIGNRIISLEQFKYDLTPPETYAEVFEK
LQKIGLIEENLSTKLKTMTQFRNKLVHVYWEIDDAVVYDILQNNLKDIEEFLKIAIKYVQSEGK

Sequences:

>Translated_144_residues
MDEKLLTQIRFLKKYLNLLKDMAQKSKKEYLEDFIYKGAVERYLQLAIECCINIGNRIISLEQFKYDLTPPETYAEVFEK
LQKIGLIEENLSTKLKTMTQFRNKLVHVYWEIDDAVVYDILQNNLKDIEEFLKIAIKYVQSEGK
>Mature_144_residues
MDEKLLTQIRFLKKYLNLLKDMAQKSKKEYLEDFIYKGAVERYLQLAIECCINIGNRIISLEQFKYDLTPPETYAEVFEK
LQKIGLIEENLSTKLKTMTQFRNKLVHVYWEIDDAVVYDILQNNLKDIEEFLKIAIKYVQSEGK

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17138; Mature: 17138

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLLTQIRFLKKYLNLLKDMAQKSKKEYLEDFIYKGAVERYLQLAIECCINIGNRIIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQFKYDLTPPETYAEVFEKLQKIGLIEENLSTKLKTMTQFRNKLVHVYWEIDDAVVYDI
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQNNLKDIEEFLKIAIKYVQSEGK
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDEKLLTQIRFLKKYLNLLKDMAQKSKKEYLEDFIYKGAVERYLQLAIECCINIGNRIIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQFKYDLTPPETYAEVFEKLQKIGLIEENLSTKLKTMTQFRNKLVHVYWEIDDAVVYDI
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQNNLKDIEEFLKIAIKYVQSEGK
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA