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The map label for this gene is 78042963

Identifier: 78042963

GI number: 78042963

Start: 540840

End: 541313

Strand: Direct

Name: 78042963

Synonym: CHY_0627

Alternate gene names: NA

Gene position: 540840-541313 (Clockwise)

Preceding gene: 78043684

Following gene: 78042786

Centisome position: 22.52

GC content: 33.54

Gene sequence:

>474_bases
ATGAAAATAAAAAAAGTAATTGCCCTTTTAGCGGTGATTGTGTTAACGTTAGCTTTTACTCAGGGTTGTGGTTTAAAGAG
AGAAAGTAAGCTTGTAAAGATGTATAAGGAGCTTGATTTAAAAGATTTTAAAAGCCAGGAGTTAGTGGGGGATAAAAATA
AATCGGAGAAGCTGGCACGGGAAGTTTATGTAGAACCCCAGCTATCCAGGGTTTTAAAGTATTTAGAATTCCTACGGAAA
AATGACACGAAGTTTATTTTATATAAAGTTGATTATAAAAAAATTGAAATTAAAGAGCAAAAGGATGATATGGCAAAACT
GTTAGTGGAAAGTGAAGTTACCGGCGATTTCTTCACCATAAAATATCCCGAGAAAAAGTTGGATTCTTTAGTGGCGAGAC
CTCTTAAATACGAAATTACTTTAAAAAAGGTCAACGATAAATGGTACATTTCCGATGCCAAACCTTTAAGTTAA

Upstream 100 bases:

>100_bases
GGGGATTAAAATATTATTACCTTAAAGCAGGAAAAAATTAAGATAGCTCGAATATTTATAAGCGTTGCGGATAAAGTGGC
TTTTGGAGGGATGGGGTAAG

Downstream 100 bases:

>100_bases
GGGCTGAAAGCAAGCGCTTTCAGCCCTTTTTTAACAGAAACCTCGTTCTTTGGGAGAATTAATAAAAGCTAAAAACTTTT
TCTCCAAAAGGGAACGTTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKIKKVIALLAVIVLTLAFTQGCGLKRESKLVKMYKELDLKDFKSQELVGDKNKSEKLAREVYVEPQLSRVLKYLEFLRK
NDTKFILYKVDYKKIEIKEQKDDMAKLLVESEVTGDFFTIKYPEKKLDSLVARPLKYEITLKKVNDKWYISDAKPLS

Sequences:

>Translated_157_residues
MKIKKVIALLAVIVLTLAFTQGCGLKRESKLVKMYKELDLKDFKSQELVGDKNKSEKLAREVYVEPQLSRVLKYLEFLRK
NDTKFILYKVDYKKIEIKEQKDDMAKLLVESEVTGDFFTIKYPEKKLDSLVARPLKYEITLKKVNDKWYISDAKPLS
>Mature_157_residues
MKIKKVIALLAVIVLTLAFTQGCGLKRESKLVKMYKELDLKDFKSQELVGDKNKSEKLAREVYVEPQLSRVLKYLEFLRK
NDTKFILYKVDYKKIEIKEQKDDMAKLLVESEVTGDFFTIKYPEKKLDSLVARPLKYEITLKKVNDKWYISDAKPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18401; Mature: 18401

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKVIALLAVIVLTLAFTQGCGLKRESKLVKMYKELDLKDFKSQELVGDKNKSEKLAR
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCHHHCCCCCHHHHHHH
EVYVEPQLSRVLKYLEFLRKNDTKFILYKVDYKKIEIKEQKDDMAKLLVESEVTGDFFTI
HHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEEE
KYPEKKLDSLVARPLKYEITLKKVNDKWYISDAKPLS
ECCHHHHHHHHCCCCEEEEEEEEECCEEEECCCCCCC
>Mature Secondary Structure
MKIKKVIALLAVIVLTLAFTQGCGLKRESKLVKMYKELDLKDFKSQELVGDKNKSEKLAR
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCHHHCCCCCHHHHHHH
EVYVEPQLSRVLKYLEFLRKNDTKFILYKVDYKKIEIKEQKDDMAKLLVESEVTGDFFTI
HHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEEE
KYPEKKLDSLVARPLKYEITLKKVNDKWYISDAKPLS
ECCHHHHHHHHCCCCEEEEEEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA