| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78042806
Identifier: 78042806
GI number: 78042806
Start: 633211
End: 633465
Strand: Direct
Name: 78042806
Synonym: CHY_0715
Alternate gene names: NA
Gene position: 633211-633465 (Clockwise)
Preceding gene: 78044809
Following gene: 78043692
Centisome position: 26.37
GC content: 36.86
Gene sequence:
>255_bases GTGGCGTCATTAAAAAAAGTTGTGGTGGCTGTACCTTCAAATCTTTTGGAAGAAGTTGATAAAACTGCGGCGTTGGAGAA AATCAGTCGAAGTGAAGTTGTCCGTCAAGCTTTAAAGTTATATTTGGATGAAAAAAAACGTAAAATGTTAAGGGAAGAGA TGATTAAGGGCTATAAGGAAATGGCCAAGATCAACCTGAACTTAGCTTTAGAAGGTTTTTATTACGAAGCGGACGGTTAT ATGGAGGTTAAATAA
Upstream 100 bases:
>100_bases CGAGGCAATTTGTAGAAAAGCTGCTGTAGCCTTTGTTTTTCTCGCTTTTTGGTGTATAATTAGGAAGGGCGGCATCACGT TTTTAAGGAGGAATAGTTAA
Downstream 100 bases:
>100_bases TGGAGATCAGACGGGGAGATATTTTTTACGCGAATTTAAGCCCCGTAGTTGGTTCGGAACAGGGCGGTACCCGTCCGGTG TTAATTTTGCAAAATGATAT
Product: CopG family protein
Products: NA
Alternate protein names: CopG Family Transcriptional Regulator; Antitoxin EndoAI; Cytoplasmic Protein; Transcriptional Regulator Copg Family; CopG Domain-Containing Protein; Helix-Turn-Helix Domain Protein Copg Family; MazE Of xin/Antitoxin System-Like Protein; CopG Family Protein
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MASLKKVVVAVPSNLLEEVDKTAALEKISRSEVVRQALKLYLDEKKRKMLREEMIKGYKEMAKINLNLALEGFYYEADGY MEVK
Sequences:
>Translated_84_residues MASLKKVVVAVPSNLLEEVDKTAALEKISRSEVVRQALKLYLDEKKRKMLREEMIKGYKEMAKINLNLALEGFYYEADGY MEVK >Mature_83_residues ASLKKVVVAVPSNLLEEVDKTAALEKISRSEVVRQALKLYLDEKKRKMLREEMIKGYKEMAKINLNLALEGFYYEADGYM EVK
Specific function: Unknown
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9700; Mature: 9568
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLKKVVVAVPSNLLEEVDKTAALEKISRSEVVRQALKLYLDEKKRKMLREEMIKGYKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKINLNLALEGFYYEADGYMEVK HHHHHHEEEEEEEEEECCCEEECC >Mature Secondary Structure ASLKKVVVAVPSNLLEEVDKTAALEKISRSEVVRQALKLYLDEKKRKMLREEMIKGYKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKINLNLALEGFYYEADGYMEVK HHHHHHEEEEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA