Click here to switch to the map view.

The map label for this gene is yitS [H]

Identifier: 78042789

GI number: 78042789

Start: 2165936

End: 2166784

Strand: Direct

Name: yitS [H]

Synonym: CHY_2418

Alternate gene names: 78042789

Gene position: 2165936-2166784 (Clockwise)

Preceding gene: 78044177

Following gene: 78044736

Centisome position: 90.19

GC content: 42.17

Gene sequence:

>849_bases
TTGCGCAAGTTTAAGATTTTCACCGATAGTACCCTGGATTTACCCGAAGAAATTTTAAACGAAGAGGGAATTGAGATTAT
TCCTCTTTCCGTTCATTTTCCCGACGGCAAGAGCTATCTTGATCGCCTGGAAATTTCCGCTAAAGAGTTTTTAGCCAGGA
TGAAAGAATACGTCGAATTACCTAAAACCAGTCAACCATCCCCCCATCACTTTTTAGAAGCTTTTAAAAATGCCGTACAC
CAATTGGAAAACGTCGGCGAGGTAGTTTTTTTAGGGGTTTCGTCCCGGCTTTCCGGAACCTTTCAAACTGCTAAAATGGC
TGCAGAAATGGTCAGCAAAAAAATCACCGTTATTGATTCAAAAACTGGGTCCCTGGGACTTGGGATTTTAGCCTTAAAGG
TTGCGGAATGGTTAAAAGAAGGGATAAACCGGGAAGAACTTTTACACCGGATAGAAAAATTTAAAGAAGAGCATCGGCTC
TTTTTTACCGTGGAAACCATGGAAAACCTGGTCAAAGGCGGGCGGATTTCCCGGATGAAAGAAAAGGTAGCTAATTTTTT
AAATATAAAACCTATCTTTCACCGGACACCTGAAGGCGAAATAGCTCATTTAGAAAATGTCCGGGGGCGAAAAAGAGCCA
TCCAGAGACTAATTGAGCTTGCCGAACAACATGGGAAAGATTTTGAACAAAAAATTGTCGGTATAACTCACGCCGGCGCT
TTGGAAGAGGCGCTTTTGTTGAAGGAAAAACTTCTGGAACGGTTAAAGCCGAAAAAAATTATCCTTTCCGAATTAAGTCC
AGCACTGGCCACCCATGGCGGAGAAGGTACTTTACTGGTGACTTATTAA

Upstream 100 bases:

>100_bases
AAAAATTTCCCTGCCTAAACCCAAAATAAAATAATTTTTGACATATTTAGATTTTTCCTGTATATTTAAGTTAAATTTAT
TTTTTTGGAGGTTTTGCGAT

Downstream 100 bases:

>100_bases
AAATAAGGGGACGGTTCAGAGCAGCAAAATGGATGCTTTAAGAACCGTCCCTTCCGTTTACTGTATTTCTATGCGGCGGG
CCCGGGGATTGTTTTTGCCG

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVELPKTSQPSPHHFLEAFKNAVH
QLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDSKTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRL
FFTVETMENLVKGGRISRMKEKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIELAEQHGKDFEQKIVGITHAGA
LEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLVTY

Sequences:

>Translated_282_residues
MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVELPKTSQPSPHHFLEAFKNAVH
QLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDSKTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRL
FFTVETMENLVKGGRISRMKEKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIELAEQHGKDFEQKIVGITHAGA
LEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLVTY
>Mature_282_residues
MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVELPKTSQPSPHHFLEAFKNAVH
QLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDSKTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRL
FFTVETMENLVKGGRISRMKEKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIELAEQHGKDFEQKIVGITHAGA
LEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLVTY

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31951; Mature: 31951

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVEL
CCEEEEECCCCCCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
PKTSQPSPHHFLEAFKNAVHQLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDS
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHEEEEEC
KTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRLFFTVETMENLVKGGRISRMK
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCHHHHHH
EKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIELAEQHGKDFEQKIVGITHAGA
HHHHHHHCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH
LEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLVTY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVEL
CCEEEEECCCCCCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
PKTSQPSPHHFLEAFKNAVHQLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDS
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHEEEEEC
KTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRLFFTVETMENLVKGGRISRMK
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCHHHHHH
EKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIELAEQHGKDFEQKIVGITHAGA
HHHHHHHCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH
LEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLVTY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]