| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yajO [H]
Identifier: 78042764
GI number: 78042764
Start: 470292
End: 471245
Strand: Direct
Name: yajO [H]
Synonym: CHY_0541
Alternate gene names: 78042764
Gene position: 470292-471245 (Clockwise)
Preceding gene: 78044658
Following gene: 78044200
Centisome position: 19.58
GC content: 43.82
Gene sequence:
>954_bases TTGGAAAGAAGGGTTCTTGGAAGAACGGGAATTGAAGTTTCGCGGCTTTGCTTTGGAGCTCTAACAATTGGACCGCTGCA AAGAAATTTGCCCTTAAAGGAAGGAGCCCGGCTTATACGCCTTGCTATAGAAAACGGGGTAAATTTTATTGATACCGCAG AGCTTTACCAAACCTACCCGTATATCAGAAGGGCATTAAAAGGTTTGCCCCCGGATCAGGTGGTAATTGCCACAAAATCG TATGCGGCAACAGCTCAAGCTATGGAGAAAAGCCTTAAGGAAGCTTTAACTTCCCTGGGGCGGGATTATATAGATATTTT TCTCTTACACGAGCAGGAGTCGTATTTTACCTTAAAGGGGCATGAAGAGGCCCTTTTTTATCTCCAAAAGGCCAAGGAAA AAGGCTATGTTCGGGCAGTAGGTATTTCTACTCATTTTATTGCCGGGGTAAGGGCGGGAATGATGCATCCTGCCGTGGAA GTGATTCATCCTCTGATAAATTACCGCGGCATAGGTATTGCCGATGGCACGGCTGAGGAAATGCTTGCAGCTATTTCTGA AGCTTATCTCATGGGTAAAGGGCTTTATGGTATGAAGCCTTTAGGTGGCGGGCATTTGGGAAGCGATTTTAAAAAAGCTT TTGACTTCGTTCTGGGGATAAAAGAACTTTCCGCAATTGCTGTGGGGATGAAATCGGAAATTGAGGTAATTGCTAATATA AACTACTTTCAAAAAAGTGAAATTGATGGTAAGATAGAAGAGAGTTTAAAAAAAACTGCCAGGAAGCTTCATATTGAAAG CTGGTGCCAGGGCTGTGGACGTTGTGTTAAAGTCTGTTCCCAGAAAGCTTTAACGCTGGGACCGAAGGGCAAAGTGCGGG TAAATCAGGAGAAATGCCTTTTTTGCGGATACTGTGGTGCTCACTGTCCTCATTTTGCCATCAAAGTAATTTAA
Upstream 100 bases:
>100_bases CATTACCAGTCATAAAAACGCCCGGAATTTAATTCGCAAAATTGAACGGGATGAATTACTGGAAGAGCTTTTAAAAGTGT ACTTGGAAAGGGAATAAAAA
Downstream 100 bases:
>100_bases CCCGGCGGGTGGATGGATGAAAGTTTTAGGACTGGATGTTGGAGATAAAAAAATTGGGGTTGCGCTGTCCGATGAACTTG GCCTTACGGCTCAAGGATTA
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MERRVLGRTGIEVSRLCFGALTIGPLQRNLPLKEGARLIRLAIENGVNFIDTAELYQTYPYIRRALKGLPPDQVVIATKS YAATAQAMEKSLKEALTSLGRDYIDIFLLHEQESYFTLKGHEEALFYLQKAKEKGYVRAVGISTHFIAGVRAGMMHPAVE VIHPLINYRGIGIADGTAEEMLAAISEAYLMGKGLYGMKPLGGGHLGSDFKKAFDFVLGIKELSAIAVGMKSEIEVIANI NYFQKSEIDGKIEESLKKTARKLHIESWCQGCGRCVKVCSQKALTLGPKGKVRVNQEKCLFCGYCGAHCPHFAIKVI
Sequences:
>Translated_317_residues MERRVLGRTGIEVSRLCFGALTIGPLQRNLPLKEGARLIRLAIENGVNFIDTAELYQTYPYIRRALKGLPPDQVVIATKS YAATAQAMEKSLKEALTSLGRDYIDIFLLHEQESYFTLKGHEEALFYLQKAKEKGYVRAVGISTHFIAGVRAGMMHPAVE VIHPLINYRGIGIADGTAEEMLAAISEAYLMGKGLYGMKPLGGGHLGSDFKKAFDFVLGIKELSAIAVGMKSEIEVIANI NYFQKSEIDGKIEESLKKTARKLHIESWCQGCGRCVKVCSQKALTLGPKGKVRVNQEKCLFCGYCGAHCPHFAIKVI >Mature_317_residues MERRVLGRTGIEVSRLCFGALTIGPLQRNLPLKEGARLIRLAIENGVNFIDTAELYQTYPYIRRALKGLPPDQVVIATKS YAATAQAMEKSLKEALTSLGRDYIDIFLLHEQESYFTLKGHEEALFYLQKAKEKGYVRAVGISTHFIAGVRAGMMHPAVE VIHPLINYRGIGIADGTAEEMLAAISEAYLMGKGLYGMKPLGGGHLGSDFKKAFDFVLGIKELSAIAVGMKSEIEVIANI NYFQKSEIDGKIEESLKKTARKLHIESWCQGCGRCVKVCSQKALTLGPKGKVRVNQEKCLFCGYCGAHCPHFAIKVI
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646155, Length=198, Percent_Identity=29.2929292929293, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34944; Mature: 34944
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRVLGRTGIEVSRLCFGALTIGPLQRNLPLKEGARLIRLAIENGVNFIDTAELYQTYP CCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YIRRALKGLPPDQVVIATKSYAATAQAMEKSLKEALTSLGRDYIDIFLLHEQESYFTLKG HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEECC HEEALFYLQKAKEKGYVRAVGISTHFIAGVRAGMMHPAVEVIHPLINYRGIGIADGTAEE CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH MLAAISEAYLMGKGLYGMKPLGGGHLGSDFKKAFDFVLGIKELSAIAVGMKSEIEVIANI HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NYFQKSEIDGKIEESLKKTARKLHIESWCQGCGRCVKVCSQKALTLGPKGKVRVNQEKCL CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCEE FCGYCGAHCPHFAIKVI EEECCCCCCCCEEEEEC >Mature Secondary Structure MERRVLGRTGIEVSRLCFGALTIGPLQRNLPLKEGARLIRLAIENGVNFIDTAELYQTYP CCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YIRRALKGLPPDQVVIATKSYAATAQAMEKSLKEALTSLGRDYIDIFLLHEQESYFTLKG HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEECC HEEALFYLQKAKEKGYVRAVGISTHFIAGVRAGMMHPAVEVIHPLINYRGIGIADGTAEE CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH MLAAISEAYLMGKGLYGMKPLGGGHLGSDFKKAFDFVLGIKELSAIAVGMKSEIEVIANI HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NYFQKSEIDGKIEESLKKTARKLHIESWCQGCGRCVKVCSQKALTLGPKGKVRVNQEKCL CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCEE FCGYCGAHCPHFAIKVI EEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]