| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761157
Identifier: 77761157
GI number: 77761157
Start: 2004890
End: 2006092
Strand: Direct
Name: 77761157
Synonym: XC_1667
Alternate gene names: NA
Gene position: 2004890-2006092 (Clockwise)
Preceding gene: 66767990
Following gene: 66767992
Centisome position: 38.94
GC content: 59.68
Gene sequence:
>1203_bases ATGAGCGTCTCTCCCGCAGCTCCAGCTTCCGGCATTCGCCGTCCCTGCTATCTGGTCTTGTCTGCTCACGATTTCCGCAC GCCACGTCGGGCTAACATCCATTTCATCACCGATCAGTTGGCTTTGCGTGGCACGACGCGTTTTTTTTCGTTGCGATACA GCAGACTCTCCCGCATGAAGGGAGATATGCGCCTGCCGCTGGATGACACCGCAAATACCGTTGTCTCGCACAACGGTGTG GACTGTTACCTGTGGCGCACGACAGTGCATCCATTCAATACACGCCGGAGCTGGCTGCGTCCTGTGGAAGATGCCATGTT CCGCTGGTATGCCGCGCATCCGCCAAAGCAGTTGCTGGACTGGATGCGCGAGTCCGATGTCATCGTGTTTGAAAGCGGAA TCGCCGTCGCATTCATCGAGCTTGCCAAGCGGGTCAATCCGGCTGCCAAACTGGTCTATCGCGCGTCGGACGGGCTGAGC ACCATCAACGTGGCGTCTTACATCGAGCGCGAGTTCGACCGCGTGGCTCCGACGCTGGACGTCATTGCCTTGGTGTCGCC CGCGATGGCCGCAGAAGTAGCGAGCCGCGACAACGTCTTCCATGTAGGCCACGGCGTGGACCACAACCTCGATCAGCTCG GCGACCCGTCGCCGTATGCCGAGGGCATCCATGCAGTTGCAGTCGGGTCGATGCTGTTTGATCCTGAATTTTTCGTCGTT GCCAGCAAGGCCTTTCCGCAGGTGACCTTCCATGTGATCGGCTCCGGGATGGGCCGCCATCCGGGCTACGGCGACAATGT CATTGTCTATGGCGAAATGAAGCACGCGCAGACGATTGGCTATATCAAGCACGCACGTTTCGGCATTGCGCCTTACGCGT CCGAGCAGGTGCCGGTGTATCTGGCAGACAGCTCAATGAAATTGCTGCAATACGACTTTTTCGGCTTGCCGGCGGTGTGC CCGAATGCTGTGGTGGGGCCGTACAAATCGCGCTTCGGGTACACGCCAGGCAATGCCGATTCGGTGATTGCCGCCATTAC CCAGGCACTGGAAGCACCGCGTGTACGTTACCGCCAGTGTCTCAACTGGTCCGACACCACCGACCGCGTGCTCGACCCAC GGGCGTATCCAGAAACCCGTCTTTATCCGCACCCCCCCACCGCCGCGCCGCAGCTCTCTTCGGAGGCAGCGCTCTCACAT TGA
Upstream 100 bases:
>100_bases CGCAAGCTGCTCACGCAGGCGAAGGCGCGCCGATGACACTGCACTGCGGTACTGGAATGTTGGACTTCGAAACTTCCCAC TCTTGCAAAGGACACGGCCT
Downstream 100 bases:
>100_bases GGCGGCGCTTTTTGACCACGTTTGAAGGAGGATCCCTGTCATGGCCAACGCTTTACTGCAGAAATGGGTGGAACGCGCGG AACGTCGCGCATTGTTCTGG
Product: GumK protein
Products: NA
Alternate protein names: UDP-GlcA Beta-Glucuronosyltransferase; GumK-Related Protein; Glucuronyl Transferase; Glucuronosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumK
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSVSPAAPASGIRRPCYLVLSAHDFRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGV DCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLS TINVASYIEREFDRVAPTLDVIALVSPAMAAEVASRDNVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEFFVV ASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVC PNAVVGPYKSRFGYTPGNADSVIAAITQALEAPRVRYRQCLNWSDTTDRVLDPRAYPETRLYPHPPTAAPQLSSEAALSH
Sequences:
>Translated_400_residues MSVSPAAPASGIRRPCYLVLSAHDFRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGV DCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLS TINVASYIEREFDRVAPTLDVIALVSPAMAAEVASRDNVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEFFVV ASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVC PNAVVGPYKSRFGYTPGNADSVIAAITQALEAPRVRYRQCLNWSDTTDRVLDPRAYPETRLYPHPPTAAPQLSSEAALSH >Mature_399_residues SVSPAAPASGIRRPCYLVLSAHDFRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVD CYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST INVASYIEREFDRVAPTLDVIALVSPAMAAEVASRDNVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEFFVVA SKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCP NAVVGPYKSRFGYTPGNADSVIAAITQALEAPRVRYRQCLNWSDTTDRVLDPRAYPETRLYPHPPTAAPQLSSEAALSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44438; Mature: 44307
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSPAAPASGIRRPCYLVLSAHDFRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMK CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCC GDMRLPLDDTANTVVSHNGVDCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLD CCCCCCCCCCCCHHEECCCCEEEEEEEECCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHH WMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLD HHHCCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHHH VIALVSPAMAAEVASRDNVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEFFVV HHHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCHHHHCHHHHHHHHHHCCCCEEEE ASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY ECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEE LADSSMKLLQYDFFGLPAVCPNAVVGPYKSRFGYTPGNADSVIAAITQALEAPRVRYRQC EECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHH LNWSDTTDRVLDPRAYPETRLYPHPPTAAPQLSSEAALSH CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure SVSPAAPASGIRRPCYLVLSAHDFRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMK CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCC GDMRLPLDDTANTVVSHNGVDCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLD CCCCCCCCCCCCHHEECCCCEEEEEEEECCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHH WMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLD HHHCCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHHH VIALVSPAMAAEVASRDNVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEFFVV HHHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCHHHHCHHHHHHHHHHCCCCEEEE ASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY ECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEE LADSSMKLLQYDFFGLPAVCPNAVVGPYKSRFGYTPGNADSVIAAITQALEAPRVRYRQC EECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHH LNWSDTTDRVLDPRAYPETRLYPHPPTAAPQLSSEAALSH CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA