Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 77748743

Identifier: 77748743

GI number: 77748743

Start: 4476327

End: 4477595

Strand: Direct

Name: 77748743

Synonym: XAC3806

Alternate gene names: NA

Gene position: 4476327-4477595 (Clockwise)

Preceding gene: 77748742

Following gene: 21244531

Centisome position: 86.49

GC content: 68.09

Gene sequence:

>1269_bases
ATGACGCAGTGGTACTACGCCGACGCACAGCGGCAGCGCCAGGGGCCGGTGGACACGGACACGCTTCGTGCGCGCCTGTC
GCAGGGCATCGTCGACGGCTCCAGCCTGGTCTGGCGCGAAGGTCTGGCGCAGTGGGTGGCACTGCACGAGGTCGAGGGCG
AGCTAGGCTTCGGCGGCGCAGCGCCGGCCGCGGGCCCGGAAGCCAGCGGGCCGATGCCGGCGGATGCGACACGCCATGCG
CCACTGTCGGCTGCGTATCCCGGCGACAACCCGCCGGCCACAGCCTCGGCTTCCGCAACCTTGCCGATCGACGACCACGC
CGCTGAAACATCGCGCTGGCCGCCGGCAGTTGCCGGCGGCGGCATTGCCGGTGCGAGTGCCAGCACCAATGATGCCGGCG
CGACTGACGATGCCGGTCACCACCCGGCAATCGACTCCCCACTACATCCGCCGCGCGATCAATCCCCGTTATCGGACCCG
TCGGCATGGTCCACCGCGCCGCTGGCGTCAGATCCAAGCCCGACCACGACCTCGAGCACCACGCCGACACCGGGTCACAC
CCCGGCAGCGGCGACCGCGCCACCTCCAGGGGCCTGGGATGCCCCGGCCCCCGCTGCCGCCGCAGCAGGCCTGGCGCTGC
AGGATGCGCCAGTGGTCTACGCCGGTCTTTGGCGGCGCGTGGCCGCCAGCATTCTCGATAGCTTGATCACCACCTTTGCG
GTGTACCTGATCGTGATCCCGCTGGTGTTCGTGGTGGCGCTGGTCACCACGCGCGGCGATTCAGGTTCGGCGTTGGACAA
CGGCAGTGCGCTCGGCATCGCCATCGTGGTGATGTCCTATGGCATCGGCCTGGCCATCCCGACGCTGTATTTCGCCTGGA
TGCAGTCCAGCCGGCATCAGGCCAGCCTGGGCAAGCTCGCCTGCGGCATCAAGCTGGTGCGTGCCGACAGCAACGGCGGC
CGGGTCGGATTCTGGCGCAATGTGCTGCGCTATCTGGCCTACATGCTGATCAGCGTGCTGACCCTGGGCATCGGGGTGAT
CGTGGCGGCCTTCATGGCCGGCATGACCGAGCGCAAGCAGGCCCCGCACGACAAGGTCTGCGACACCCTGGTCGTGGACC
GTTGGGCGTTCACCGAGCATCCGGAGCGGCAATCCAGAGGATTGGATACCGTGTCCATCGTGGTTCTGGCCATTTACGGG
CTGATCCTGGTGCTCTCGGTGGTGGTCGTGGCCTTCATGCTGGCGGCGATCGGAATGAGTCAAAGCTAG

Upstream 100 bases:

>100_bases
GCTGGCGGTGCAGTTCCGAAATCGACGACACCCAACTTCCACCGGATTGCCGCGGCTGACCGCCTGCTGCATGCCGATCG
CGACACGCTAAGGGGACAAC

Downstream 100 bases:

>100_bases
CAGTTCACGGCGCTGGCCGCTTGACACGGCGACGCCCGCCGTGATCTTTCTAATAAGAGAACTGAACGCCCGGGAGTCCT
TCCCGGGCGTTAACGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Rdd Domain Containing Protein; Integral Inner Membrane Protein; Transmembrane RDD Family Protein; Rdd-Family Protein; Transmembrane Rdd Family Protein

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTQWYYADAQRQRQGPVDTDTLRARLSQGIVDGSSLVWREGLAQWVALHEVEGELGFGGAAPAAGPEASGPMPADATRHA
PLSAAYPGDNPPATASASATLPIDDHAAETSRWPPAVAGGGIAGASASTNDAGATDDAGHHPAIDSPLHPPRDQSPLSDP
SAWSTAPLASDPSPTTTSSTTPTPGHTPAAATAPPPGAWDAPAPAAAAAGLALQDAPVVYAGLWRRVAASILDSLITTFA
VYLIVIPLVFVVALVTTRGDSGSALDNGSALGIAIVVMSYGIGLAIPTLYFAWMQSSRHQASLGKLACGIKLVRADSNGG
RVGFWRNVLRYLAYMLISVLTLGIGVIVAAFMAGMTERKQAPHDKVCDTLVVDRWAFTEHPERQSRGLDTVSIVVLAIYG
LILVLSVVVVAFMLAAIGMSQS

Sequences:

>Translated_422_residues
MTQWYYADAQRQRQGPVDTDTLRARLSQGIVDGSSLVWREGLAQWVALHEVEGELGFGGAAPAAGPEASGPMPADATRHA
PLSAAYPGDNPPATASASATLPIDDHAAETSRWPPAVAGGGIAGASASTNDAGATDDAGHHPAIDSPLHPPRDQSPLSDP
SAWSTAPLASDPSPTTTSSTTPTPGHTPAAATAPPPGAWDAPAPAAAAAGLALQDAPVVYAGLWRRVAASILDSLITTFA
VYLIVIPLVFVVALVTTRGDSGSALDNGSALGIAIVVMSYGIGLAIPTLYFAWMQSSRHQASLGKLACGIKLVRADSNGG
RVGFWRNVLRYLAYMLISVLTLGIGVIVAAFMAGMTERKQAPHDKVCDTLVVDRWAFTEHPERQSRGLDTVSIVVLAIYG
LILVLSVVVVAFMLAAIGMSQS
>Mature_421_residues
TQWYYADAQRQRQGPVDTDTLRARLSQGIVDGSSLVWREGLAQWVALHEVEGELGFGGAAPAAGPEASGPMPADATRHAP
LSAAYPGDNPPATASASATLPIDDHAAETSRWPPAVAGGGIAGASASTNDAGATDDAGHHPAIDSPLHPPRDQSPLSDPS
AWSTAPLASDPSPTTTSSTTPTPGHTPAAATAPPPGAWDAPAPAAAAAGLALQDAPVVYAGLWRRVAASILDSLITTFAV
YLIVIPLVFVVALVTTRGDSGSALDNGSALGIAIVVMSYGIGLAIPTLYFAWMQSSRHQASLGKLACGIKLVRADSNGGR
VGFWRNVLRYLAYMLISVLTLGIGVIVAAFMAGMTERKQAPHDKVCDTLVVDRWAFTEHPERQSRGLDTVSIVVLAIYGL
ILVLSVVVVAFMLAAIGMSQS

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43618; Mature: 43487

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQWYYADAQRQRQGPVDTDTLRARLSQGIVDGSSLVWREGLAQWVALHEVEGELGFGGA
CCCEEECCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
APAAGPEASGPMPADATRHAPLSAAYPGDNPPATASASATLPIDDHAAETSRWPPAVAGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCC
GIAGASASTNDAGATDDAGHHPAIDSPLHPPRDQSPLSDPSAWSTAPLASDPSPTTTSST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTPGHTPAAATAPPPGAWDAPAPAAAAAGLALQDAPVVYAGLWRRVAASILDSLITTFA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYLIVIPLVFVVALVTTRGDSGSALDNGSALGIAIVVMSYGIGLAIPTLYFAWMQSSRHQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ASLGKLACGIKLVRADSNGGRVGFWRNVLRYLAYMLISVLTLGIGVIVAAFMAGMTERKQ
HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APHDKVCDTLVVDRWAFTEHPERQSRGLDTVSIVVLAIYGLILVLSVVVVAFMLAAIGMS
CCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QS
CC
>Mature Secondary Structure 
TQWYYADAQRQRQGPVDTDTLRARLSQGIVDGSSLVWREGLAQWVALHEVEGELGFGGA
CCEEECCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
APAAGPEASGPMPADATRHAPLSAAYPGDNPPATASASATLPIDDHAAETSRWPPAVAGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCC
GIAGASASTNDAGATDDAGHHPAIDSPLHPPRDQSPLSDPSAWSTAPLASDPSPTTTSST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTPGHTPAAATAPPPGAWDAPAPAAAAAGLALQDAPVVYAGLWRRVAASILDSLITTFA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYLIVIPLVFVVALVTTRGDSGSALDNGSALGIAIVVMSYGIGLAIPTLYFAWMQSSRHQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ASLGKLACGIKLVRADSNGGRVGFWRNVLRYLAYMLISVLTLGIGVIVAAFMAGMTERKQ
HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APHDKVCDTLVVDRWAFTEHPERQSRGLDTVSIVVLAIYGLILVLSVVVVAFMLAAIGMS
CCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA