| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748704
Identifier: 77748704
GI number: 77748704
Start: 3738876
End: 3740678
Strand: Direct
Name: 77748704
Synonym: XAC3178
Alternate gene names: NA
Gene position: 3738876-3740678 (Clockwise)
Preceding gene: 21243903
Following gene: 21243905
Centisome position: 72.24
GC content: 67.05
Gene sequence:
>1803_bases ATGAGCAGCATGGCCGACCAACGCTACATCGCCACCCGCATCATCGATGCCTGCCTGCGCGAAGACCTGCGCGGGATTGC GACCCGCGGCAGTGCGGCGGTACCGGAGGCCGAGGTGCTGGCGCAGTGGACCGACCCCATCCCCGTGCAGGGCTGGTGGC GCATCGCCCACCTGCCCGGCGGCACGATCTGGCTGCCGATCCATCGTCAAGGCGCGCTGCAGGACGTCGGGGCCTGCGGC GACAGCTGGATTGTGCGCAACAGCGACGGCGTGCACGTCGAACGTGGTGCACATGCCTGGTTGCAACGCCTGAGTGCAGA GCTCGATAGCGAAACGCAACAGCTGCATCGTGCCTACGCCGACGAAGCCGACTGCGCCGCTGCGCACCGCGGGCTGGCGC GGCAGGCCTACCACGCGCAGGCACCGGCGTTGCGTAATGCGCTGCATCACCCCGATGCCGCCGAGCGTGCCTACCGCTGC GATCAGCTGGCCAGCTACCGCGACCATCCGTTCTATCCCACCGCGCGTGCCAAGTCCGGGCTGGATGCGGCCGAACTGCG CCATTACGCGCCGGAATTCGCGCCGACCTTTGCGTTGCGTTGGCTGGCGATTCCACAGGCGTTGGCGCAATGCACCAGCG CCCCGCCGGCCGCGCTATGGCCGCAGTTCGAAAACCTGGGTCTACCGCCGGAACTGACCGCCACGCATCTCGCCTGGCCG GTGCATCCAATGGTCTGGGAGCGCTTGGAGCAGGAAGGCTTCGCGCTGCCCGAGGGCGTGCATCGAGCGCCGAGCGCCTG GCTGGACGTGCGCCCAACGCTATCGGTGCGCACGCTGGTGCCGCTGCAGCATCCGCACCTGCATCTCAAATTGCCCATTC CGATGCGCACGCTGGGCGCGCTCAACCTGCGTCTGATCAAGCCGTCCACGTTGTATGACGGGCACTGGATGGAGCGCGCA TTGCGGCACATCGATGCGGTCGACCCTGCACTGCAAGACCGTTGCGTGTTCGTCGACGAGTCGCACGGGGGGCATGTCGG GCAGACGCGGCATCTTGCCTATCTGGTGCGGCGTTACCCAGCGCTGGACGATGCCACATTGGTCCCGGTGGCTGCGTTAT GCGCGCCCATGCCCGATGGCCGCCCGATGGCGATCCATCTTGCCGAACGTTTTGCGCATGGCGACGTGCTGCGCTGGTGG CGCGACTACACCGAGCTGCTGCTTGCCGTGCATCTGCGCCTGTGGCTGCGTTATGGCGTTGCACTGGAAGCCAATCAGCA GAACAGCGTGATGGTGTATGCCGATGGCCAAGCCACGCGCCTGTTGATGAAGGACAACGACGCTGCGCGGATTGCGCTGC CGCAATTGCGGGAAGCACTGCCGGAGGTGGATGCACTGGGCTCGCTGCAGGATGCGCGTATTGCGGTAGACGATCCACAG GCGTTGGCGCAGATGTTCTGCACGATCGTGCTGCAGCTGGATCTGCAGGCGGTGCTGGAAGGCCTGGCCGAATGGCAGCC CGCGCTCCGCGCGCCGCTGTACGCGCAGTTGCAGGCCCAGGTCGCTGCAACGCTGGCGCAACTGGAAGGCGACGGCATCG ATATCGGCCCCGCACGCCGCCTGTTGGCCACGCCACGGCTGCCGGTGAAGTACCTGCTCAGCGCCGGCAGCCTGCTCAGC AAGCAGCTCACCGGCGCCACCGACATCAACAAGTTCTACGGCGACAGCGCGCCCAATCCGTTCGGCGATGCGTTCGCCGA TGCGCGACATCCGCCGCGCAGGCAAGCGGGCGCGCCGCGATGA
Upstream 100 bases:
>100_bases TGCTGAGCGCGTTGGCACGCGATGCGCAGACACTGCAACACGCAGTGGTGCAGGCCGAAGCGGGGCTGAAGTGGCGCATC GATGGCGCGGAATTGCGCGC
Downstream 100 bases:
>100_bases GGCGCATCCTGGGTCCGGTACTGGCTGCGCATTATCTGGCGGCATTCACGGCGCTGGGCATGCCGCTGTTTCTGCCGCAG GTCTTGGCCGAACTCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSSMADQRYIATRIIDACLREDLRGIATRGSAAVPEAEVLAQWTDPIPVQGWWRIAHLPGGTIWLPIHRQGALQDVGACG DSWIVRNSDGVHVERGAHAWLQRLSAELDSETQQLHRAYADEADCAAAHRGLARQAYHAQAPALRNALHHPDAAERAYRC DQLASYRDHPFYPTARAKSGLDAAELRHYAPEFAPTFALRWLAIPQALAQCTSAPPAALWPQFENLGLPPELTATHLAWP VHPMVWERLEQEGFALPEGVHRAPSAWLDVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGALNLRLIKPSTLYDGHWMERA LRHIDAVDPALQDRCVFVDESHGGHVGQTRHLAYLVRRYPALDDATLVPVAALCAPMPDGRPMAIHLAERFAHGDVLRWW RDYTELLLAVHLRLWLRYGVALEANQQNSVMVYADGQATRLLMKDNDAARIALPQLREALPEVDALGSLQDARIAVDDPQ ALAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQVAATLAQLEGDGIDIGPARRLLATPRLPVKYLLSAGSLLS KQLTGATDINKFYGDSAPNPFGDAFADARHPPRRQAGAPR
Sequences:
>Translated_600_residues MSSMADQRYIATRIIDACLREDLRGIATRGSAAVPEAEVLAQWTDPIPVQGWWRIAHLPGGTIWLPIHRQGALQDVGACG DSWIVRNSDGVHVERGAHAWLQRLSAELDSETQQLHRAYADEADCAAAHRGLARQAYHAQAPALRNALHHPDAAERAYRC DQLASYRDHPFYPTARAKSGLDAAELRHYAPEFAPTFALRWLAIPQALAQCTSAPPAALWPQFENLGLPPELTATHLAWP VHPMVWERLEQEGFALPEGVHRAPSAWLDVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGALNLRLIKPSTLYDGHWMERA LRHIDAVDPALQDRCVFVDESHGGHVGQTRHLAYLVRRYPALDDATLVPVAALCAPMPDGRPMAIHLAERFAHGDVLRWW RDYTELLLAVHLRLWLRYGVALEANQQNSVMVYADGQATRLLMKDNDAARIALPQLREALPEVDALGSLQDARIAVDDPQ ALAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQVAATLAQLEGDGIDIGPARRLLATPRLPVKYLLSAGSLLS KQLTGATDINKFYGDSAPNPFGDAFADARHPPRRQAGAPR >Mature_599_residues SSMADQRYIATRIIDACLREDLRGIATRGSAAVPEAEVLAQWTDPIPVQGWWRIAHLPGGTIWLPIHRQGALQDVGACGD SWIVRNSDGVHVERGAHAWLQRLSAELDSETQQLHRAYADEADCAAAHRGLARQAYHAQAPALRNALHHPDAAERAYRCD QLASYRDHPFYPTARAKSGLDAAELRHYAPEFAPTFALRWLAIPQALAQCTSAPPAALWPQFENLGLPPELTATHLAWPV HPMVWERLEQEGFALPEGVHRAPSAWLDVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGALNLRLIKPSTLYDGHWMERAL RHIDAVDPALQDRCVFVDESHGGHVGQTRHLAYLVRRYPALDDATLVPVAALCAPMPDGRPMAIHLAERFAHGDVLRWWR DYTELLLAVHLRLWLRYGVALEANQQNSVMVYADGQATRLLMKDNDAARIALPQLREALPEVDALGSLQDARIAVDDPQA LAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQVAATLAQLEGDGIDIGPARRLLATPRLPVKYLLSAGSLLSK QLTGATDINKFYGDSAPNPFGDAFADARHPPRRQAGAPR
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 66411; Mature: 66279
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMADQRYIATRIIDACLREDLRGIATRGSAAVPEAEVLAQWTDPIPVQGWWRIAHLPG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCC GTIWLPIHRQGALQDVGACGDSWIVRNSDGVHVERGAHAWLQRLSAELDSETQQLHRAYA CEEEEEECCCCCHHHHHCCCCCEEEECCCCCEEECHHHHHHHHHHHHHCHHHHHHHHHHC DEADCAAAHRGLARQAYHAQAPALRNALHHPDAAERAYRCDQLASYRDHPFYPTARAKSG CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCC LDAAELRHYAPEFAPTFALRWLAIPQALAQCTSAPPAALWPQFENLGLPPELTATHLAWP CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCHHHHCCC VHPMVWERLEQEGFALPEGVHRAPSAWLDVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGA CCHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCEEEEEECCCCCCEEEECCCCHHHHCC LNLRLIKPSTLYDGHWMERALRHIDAVDPALQDRCVFVDESHGGHVGQTRHLAYLVRRYP CEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCC ALDDATLVPVAALCAPMPDGRPMAIHLAERFAHGDVLRWWRDYTELLLAVHLRLWLRYGV CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALEANQQNSVMVYADGQATRLLMKDNDAARIALPQLREALPEVDALGSLQDARIAVDDPQ EEECCCCCCEEEEECCCEEEEEEECCCCCEEEHHHHHHHCCHHHHHCCCCCCEEEECCHH ALAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQVAATLAQLEGDGIDIGPARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LLATPRLPVKYLLSAGSLLSKQLTGATDINKFYGDSAPNPFGDAFADARHPPRRQAGAPR HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SSMADQRYIATRIIDACLREDLRGIATRGSAAVPEAEVLAQWTDPIPVQGWWRIAHLPG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCC GTIWLPIHRQGALQDVGACGDSWIVRNSDGVHVERGAHAWLQRLSAELDSETQQLHRAYA CEEEEEECCCCCHHHHHCCCCCEEEECCCCCEEECHHHHHHHHHHHHHCHHHHHHHHHHC DEADCAAAHRGLARQAYHAQAPALRNALHHPDAAERAYRCDQLASYRDHPFYPTARAKSG CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCC LDAAELRHYAPEFAPTFALRWLAIPQALAQCTSAPPAALWPQFENLGLPPELTATHLAWP CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCHHHHCCC VHPMVWERLEQEGFALPEGVHRAPSAWLDVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGA CCHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCEEEEEECCCCCCEEEECCCCHHHHCC LNLRLIKPSTLYDGHWMERALRHIDAVDPALQDRCVFVDESHGGHVGQTRHLAYLVRRYP CEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCC ALDDATLVPVAALCAPMPDGRPMAIHLAERFAHGDVLRWWRDYTELLLAVHLRLWLRYGV CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALEANQQNSVMVYADGQATRLLMKDNDAARIALPQLREALPEVDALGSLQDARIAVDDPQ EEECCCCCCEEEEECCCEEEEEEECCCCCEEEHHHHHHHCCHHHHHCCCCCCEEEECCHH ALAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQVAATLAQLEGDGIDIGPARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LLATPRLPVKYLLSAGSLLSKQLTGATDINKFYGDSAPNPFGDAFADARHPPRRQAGAPR HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]