| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 77748687
Identifier: 77748687
GI number: 77748687
Start: 3509693
End: 3511702
Strand: Reverse
Name: 77748687
Synonym: XAC2999
Alternate gene names: NA
Gene position: 3511702-3509693 (Counterclockwise)
Preceding gene: 21243727
Following gene: 21243725
Centisome position: 67.85
GC content: 64.93
Gene sequence:
>2010_bases ATGACCCCCACCGTGCGCCGATCACTCACCGTTGCATTGTCGCTGGCCTGCGTCACCGCGCCGGCGCTTGCCGCTGCCGC GCCAGCCAGCGCCGCCACAGCCGCCCCGCCTGCTCCGGCAAGCGTGTTCGATCCGCTGGCCTTGTTCGCACCCCTGCAAT TGCCCGACGCCCCGAACGCCTACCGCAGCGGCAGCGGTGTGCCCGGCCCGGCGTTCTGGCAGAACCGCGCCGATTACGAT CTCAGCGCCAGCATCGACCCGGCGACGCATACGCTCAGCGGCGAGGCCGCCATCACCTATACCAACCACAGCCCCGACAC GCTGGACGTGTTGTGGCTGCAACTGGACCAGAACATTTACCGCGTCGATGCGCGCGCTGCCGCCAGCCGGCCGCTCAAGC GCAAAGAGTTCACCGATGGCATGCAGATCGCCAGTGTCGAGATCGATCAAGGCGGGCGCCGCCAGTCAGCGCACTTCATC GTCGACGACACCCGCATGCGGGTGGATCTGCCGCAGCCGTTGGCCGGGCAGGGCAAGGCGCTCACCGTACACATCCGGTA CCGCTACACGATTCCCGGCACCTGGGGCGGGCGCACGGCGGTGAGTGCCAGCAAGCAAGGCGATATCTACGAGATTGCGC AGTGGTACCCGCGCATGGCGGTGTACGACGACCTGCGTGGCTGGGACACGCAACCGAATCTGGGATCGGAGTTCTACCTG GAGTACGGCAATTTCGACTATGCAGTGACCGTGCCGGAGGGCTTTCTGGTCGCCGGCTCCGGTGCGCTGACCAATCCGCA GGACGTGCTCAGTCGCACCGAGCAGCAACGCCTGGAGCAAGCACGCAGCAGCGACCGCACCGTGCTGATCCGCACGCCTG CCGAGGTAACCGCACATGCGGCCAAGCCGGCGGGCAAGGGCACGCAAACCTGGCGCTTCCACATGGACCACACCCGCGAC GTCGCATTTGCCGCATCGCCGGCGTTCGTCTGGGATGCGGCGCGCATCAATTTGCCGGGCGGCAAGCACGCGCTTGCGAT GTCGGTGTACCCGGTGGAGGGCGTGGGCGCAGACAAGTGGAACCGCTCTACCGAATACGTCAAAGGCGCCATCGAGCATT TTTCGCAGTGGTATCCGTACCCGTGGCCGGCAGCGATCAACCTGGGCGGCTATGGCGCCGGCATGGAATATCCAGGCATC GTCTTCGATGGTTTCGAAGACGGCGGCAAGGACCTGTTCTGGATCACCGCGCACGAAATCGGCCACACCTGGTTCCCGAT GATCGTCGGCTCCAACGAGCGCCGGCATGCGTTCATGGATGAAGGTTTCAATACCTTCATCGACGTGTATGCATCGGATG CGTTCAACCAGGGCGAATACGCGCCCAAGCGCGATTCGGAATACGCGCCCAAAGGCGGCAACCCGGTCGACGAAATACTG CCGCTGCTGGCCGACACCCGTGCGCCGACGTTGATGGACAATGCCGATTCCACCAGCGAGACCTATCGCCATCCGCTGAC CTACTTCAAGGGCGCACTGGGCCTGGTGCTGTTGCGCGAACAGATCCTGGGTCCGGCGCGTTTCGATCCTGCGTTTCGCA AATACATCGCCACCTGGGCCTACAAGCATCCCACGCCGTCGGACTTTTTCCGGCTGATGGAAAGCGAAAGCGGTGAGGAC CTGTCCTGGTGGTGGCGCGGCTGGTATCTCAACAATTGGCAGCTGGACATGGGCATCGCCGACGCGCATTACCTCGACCA CGACCCGGCCAAGGGGGTGCAAGTCACATTGCGCAGCCGGCAGAAGCTGGTGATGCCGGCGACCCTGCGTGCGGACCTGG CCGATGGCAGCCACCTGGACCGGCGCGTGCCGGTGGAAACCTGGCTACAGACCGCCACGCCCACGCTGACCTTGCCGACC ACCCAGAAAGTGCTGCACGTCACCTTGGACCCGGACCATGTGCTGCCAGATGCCGACCGCAGCGACACGCGCGTGGACGT GACCGGCTGA
Upstream 100 bases:
>100_bases TGTCCGAGACCTCAGGCAGCCGCAACCGGGACCAATGGCATTCCCGCGCATGGCAACGTGCGCCGTAGGATGGGAATCCC TTTCCGCCGCAGGATTTCGC
Downstream 100 bases:
>100_bases GCAGTGCGCCGACGTGGCCGCAGCGCGGTCGCGTCGGCGGCTGCGTGCGGCGACCGGCCGACGGGAACGGAAACAGTCGC CTGCGTTGACCACCAGCCGC
Product: peptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase M1 Membrane Alanine Aminopeptidase; Peptidase; Aminopeptidase N-Like Protein; Aminopeptidase N; Secreted Aminopeptidase; M1 Family Aminopeptidase; Membrane Alanine Aminopeptidase; Aminopeptidase M1 Family; Metallopeptidase; Aminopeptidase Protein
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MTPTVRRSLTVALSLACVTAPALAAAAPASAATAAPPAPASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYD LSASIDPATHTLSGEAAITYTNHSPDTLDVLWLQLDQNIYRVDARAAASRPLKRKEFTDGMQIASVEIDQGGRRQSAHFI VDDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGDIYEIAQWYPRMAVYDDLRGWDTQPNLGSEFYL EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPAEVTAHAAKPAGKGTQTWRFHMDHTRD VAFAASPAFVWDAARINLPGGKHALAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGI VFDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNQGEYAPKRDSEYAPKGGNPVDEIL PLLADTRAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGED LSWWWRGWYLNNWQLDMGIADAHYLDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRVPVETWLQTATPTLTLPT TQKVLHVTLDPDHVLPDADRSDTRVDVTG
Sequences:
>Translated_669_residues MTPTVRRSLTVALSLACVTAPALAAAAPASAATAAPPAPASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYD LSASIDPATHTLSGEAAITYTNHSPDTLDVLWLQLDQNIYRVDARAAASRPLKRKEFTDGMQIASVEIDQGGRRQSAHFI VDDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGDIYEIAQWYPRMAVYDDLRGWDTQPNLGSEFYL EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPAEVTAHAAKPAGKGTQTWRFHMDHTRD VAFAASPAFVWDAARINLPGGKHALAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGI VFDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNQGEYAPKRDSEYAPKGGNPVDEIL PLLADTRAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGED LSWWWRGWYLNNWQLDMGIADAHYLDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRVPVETWLQTATPTLTLPT TQKVLHVTLDPDHVLPDADRSDTRVDVTG >Mature_668_residues TPTVRRSLTVALSLACVTAPALAAAAPASAATAAPPAPASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYDL SASIDPATHTLSGEAAITYTNHSPDTLDVLWLQLDQNIYRVDARAAASRPLKRKEFTDGMQIASVEIDQGGRRQSAHFIV DDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGDIYEIAQWYPRMAVYDDLRGWDTQPNLGSEFYLE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPAEVTAHAAKPAGKGTQTWRFHMDHTRDV AFAASPAFVWDAARINLPGGKHALAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIV FDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNQGEYAPKRDSEYAPKGGNPVDEILP LLADTRAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGEDL SWWWRGWYLNNWQLDMGIADAHYLDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRVPVETWLQTATPTLTLPTT QKVLHVTLDPDHVLPDADRSDTRVDVTG
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73998; Mature: 73867
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTVRRSLTVALSLACVTAPALAAAAPASAATAAPPAPASVFDPLALFAPLQLPDAPNA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCCCCC YRSGSGVPGPAFWQNRADYDLSASIDPATHTLSGEAAITYTNHSPDTLDVLWLQLDQNIY CCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEEEEECCCEE RVDARAAASRPLKRKEFTDGMQIASVEIDQGGRRQSAHFIVDDTRMRVDLPQPLAGQGKA EEECHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCE LTVHIRYRYTIPGTWGGRTAVSASKQGDIYEIAQWYPRMAVYDDLRGWDTQPNLGSEFYL EEEEEEEEEEECCCCCCCCEECCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEE EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPAEVTAHA EECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHC AKPAGKGTQTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKHALAMSVYPVEGVGADKW CCCCCCCCCEEEEECCCCCCEEEECCCCEEEECEEEECCCCCEEEEEEEECCCCCCCCCC NRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIVFDGFEDGGKDLFWITAHEI CCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHC GHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNQGEYAPKRDSEYAPKGGNPVDEIL CCEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PLLADTRAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWA HHHHCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YKHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGIADAHYLDHDPAKGVQVTLRSR CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECC QKLVMPATLRADLADGSHLDRRVPVETWLQTATPTLTLPTTQKVLHVTLDPDHVLPDADR CEEEECHHHEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCC SDTRVDVTG CCCEEEECC >Mature Secondary Structure TPTVRRSLTVALSLACVTAPALAAAAPASAATAAPPAPASVFDPLALFAPLQLPDAPNA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCCCCC YRSGSGVPGPAFWQNRADYDLSASIDPATHTLSGEAAITYTNHSPDTLDVLWLQLDQNIY CCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEEEEECCCEE RVDARAAASRPLKRKEFTDGMQIASVEIDQGGRRQSAHFIVDDTRMRVDLPQPLAGQGKA EEECHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCE LTVHIRYRYTIPGTWGGRTAVSASKQGDIYEIAQWYPRMAVYDDLRGWDTQPNLGSEFYL EEEEEEEEEEECCCCCCCCEECCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEE EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPAEVTAHA EECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHC AKPAGKGTQTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKHALAMSVYPVEGVGADKW CCCCCCCCCEEEEECCCCCCEEEECCCCEEEECEEEECCCCCEEEEEEEECCCCCCCCCC NRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIVFDGFEDGGKDLFWITAHEI CCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHC GHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNQGEYAPKRDSEYAPKGGNPVDEIL CCEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PLLADTRAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWA HHHHCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YKHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGIADAHYLDHDPAKGVQVTLRSR CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECC QKLVMPATLRADLADGSHLDRRVPVETWLQTATPTLTLPTTQKVLHVTLDPDHVLPDADR CEEEECHHHEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCC SDTRVDVTG CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA