Click here to switch to the map view.

The map label for this gene is rng [H]

Identifier: 77748673

GI number: 77748673

Start: 3246584

End: 3248083

Strand: Reverse

Name: rng [H]

Synonym: XAC2770

Alternate gene names: 77748673

Gene position: 3248083-3246584 (Counterclockwise)

Preceding gene: 21243498

Following gene: 21243496

Centisome position: 62.76

GC content: 65.2

Gene sequence:

>1500_bases
ATGTCGGAAGAGATTTTGGTCAACGTCACCCCGCGCGAGACCCGTGTGGCGGTGATCGAGAACGGCATGCTGCAGGAGTT
GCATATCGAGCGCGGCTGGCGGCGGGGCGTGGTGGGCAATATCTACAAGGGCAAGGTGCAGCGGGTGATGCCGGGCATGC
AGGCTGCCTTCGTCGAAGTGGGGCTGGAGCGTGCCGCGTTCCTGCACGCCAACGACGTGGTCCGTCTGGCACCGGCGCCG
GCCAGCGTGGTCGATACCGAAGAGACCCCGATCCCGCCGCCGCCGCCGGCGTCGGTGCCGATCGTGGAGCTGCTGCGCGA
CGGCCAGGAGATCGTGGTGCAGGTGGTCAAGGATCCGATCGGCACCAAGGGTGCGCGGTTGACCACCCAGATCAGCATTC
CTTCGCGCTATCTGGTGCTGCTGCCGCAGTCCAAGGTCGTTGGGGTGTCGGCGCGCATCGAAGACGAAGCCGAGCGGCTG
CGCCTGAAGACCATCGTCAGCGAGGTCTCGGCCCAGCATGGCGGCTTTGGCTACATCATCCGCACCAATGCCGAAGGCCA
GCCGGCCGAGGCACTGGCCGAGGACATCGCCTACCTGTCGCGGGTCTGGAACGTGGTGGAGCGCCGCGGCCGCGAAGCGC
CGCCGTGCAGCATCATCTACGAAGACCTGAGCTTGCCGCTGCGTGCGGTGCGCGACCTGATCCGCCGCGACGTGGAAAAG
GTCAAGGTCGATTCCAACGAGACCTTCGTGCAACTGCAGGCCTTCGTTGCCAAGTACATGCCGGTGCTGGCCGAGCGGCT
GGAGCTGTACACCGGCGACCGCCCGATCTTCGACCTGTACGGCGTCGAAGACGAGATCGGGCGCGCGCTGAACAAGCAGG
TGCCGCTCAAATCCGGCGGCTATCTGGTGATCGACCAGACCGAGGCGATGACCACAATCGACGTGAACACCGGTTCGTTC
GTCGGTCAGCGCAATCTCGAAGAAACCGTCTTCCGCACCAACCTGGAAGCCGCGCAGGCGGTGGCGCGGCAACTGCGCCT
GCGCAACCTGGGCGGCATCATCATCATCGACTTCATCGACATGGACGACTCCGAGCACCGCCGGCAGGTGCTGCGCACCC
TGGAAAAAGCGCTGGCGCGCGATCACGCCAAGACCACCGTGTACGAGTTCTCGCCGTTGGGCCTGGTGGAGATGACCCGC
AAGCGCACCGTCGAAAGCCTGGAGCGCCAGCTCTCGGAAACCTGCGGCCAGTGCGGCGGAAGAGGCACCATCAAGACCGC
CGAAACGGTGACCTACGAAATCTTCCGCGAGATCACCCGCGCCGTGCGCCAGTTCGATGCCGCGCGCCTGCTGGTGATCG
CCTCGTCCAAGGTGGTCGCGCGCATCACCGATGAGGAATCGGCAGCCGTCGCCGAGCTGGAGGAGTTCCTCGGCAAGAGC
ATCCGCTTCCAGTCCGACGACCAGTACCTGCAGGAGCAGTTCGATGTGGTGCTGTTGTGA

Upstream 100 bases:

>100_bases
CCGAGCGCTTCATCCGCCATCTGTCCGGAAGCTATTCCGGCGTGATGGGATTGCCGCTGTACCACACCTCGCAGTTGCTC
ACAGCCTTCGGAGCGCATTG

Downstream 100 bases:

>100_bases
GGCCGGGAATGGAGAATGGGGAGTGGGGAATGGGTGTGGAGCAACAGCCGCTCCACGGGACCTTTGGTACCACTTCAACT
TCGTTGCGCAGGCGGGCGGC

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRLAPAP
ASVVDTEETPIPPPPPASVPIVELLRDGQEIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
IRFQSDDQYLQEQFDVVLL

Sequences:

>Translated_499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRLAPAP
ASVVDTEETPIPPPPPASVPIVELLRDGQEIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
IRFQSDDQYLQEQFDVVLL
>Mature_498_residues
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRLAPAPA
SVVDTEETPIPPPPPASVPIVELLRDGQEIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLR
LKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEKV
KVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSFV
GQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRK
RTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKSI
RFQSDDQYLQEQFDVVLL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=499, Percent_Identity=56.1122244488978, Blast_Score=527, Evalue=1e-151,
Organism=Escherichia coli, GI1787325, Length=475, Percent_Identity=36, Blast_Score=284, Evalue=9e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55746; Mature: 55614

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVVRLAPAPASVVDTEETPIPPPPPASVPIVELLRDGQEIVVQVVKDPI
HHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
IRFQSDDQYLQEQFDVVLL
CCCCCCHHHHHHHCCEECC
>Mature Secondary Structure 
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVVRLAPAPASVVDTEETPIPPPPPASVPIVELLRDGQEIVVQVVKDPI
HHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
IRFQSDDQYLQEQFDVVLL
CCCCCCHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]