| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mrp [H]
Identifier: 77748672
GI number: 77748672
Start: 3203187
End: 3204038
Strand: Reverse
Name: mrp [H]
Synonym: XAC2741
Alternate gene names: 77748672
Gene position: 3204038-3203187 (Counterclockwise)
Preceding gene: 21243471
Following gene: 21243467
Centisome position: 61.91
GC content: 67.25
Gene sequence:
>852_bases ATGACGGGCGAACGCAGAATCGCCGCGCATGCGGTGCAGGGGGCGTTGGCGCCGCACCCGCGCATCCGCAACGTGATTGC GGTGGGGTCCGGCAAGGGCGGCGTGGGCAAGTCCACCACTGCGGTGAATCTGGCACTGGCGCTGCGTCAGTTGGGCGCGC GCGTCGGCGTGCTGGATGCCGATATCTATGGCCCCAGCGTGCCGGCGATGCTGGGCCTGAGCGGGCGGCCGGATAGCCCG GACAACAAGTCGATCGAACCGCTGCGTGCGTTCGGGATCGAGGCGATGTCGATCGGCCTGTTGGTCGATCAGGACACCCC GATGATCTGGCGCGGGCCGATGGCGACGTCCGCGCTGACCCAGCTGTTCAACGACACCCTGTGGGACGACCTGGACTATC TGCTGATCGACCTGCCGCCGGGCACCGGCGACATCCAGTTGACCCTGTCGCAGAAGATTCCGGTGGCCGGTGCGGTGATC GTCACCACGCCGCAGGACATCGCCACGCTGGACGCGCGCAAGGCCTTGAAGATGTTCGAAAAGGTCGAGGTGCCGGTGCT CGGCATCGTCGAGAATATGGCGGTGCATACCTGCAGCAACTGCGGTCACCGCGAGCATCTGTTCGGCGAAGGCGGCGGCG AGCGCATGGCGGCGCAGTACGGCGTGCCGTTATTGGGGGCGTTGCCGCTGGTGATTGCAATCCGTGAGCAAGGCGATGTC GGTCAGCCGATCGTGGTAGCCGCGCCGGAGTCGGTGGCAGCCCAGGCCTACCTGGCGGCGGCGACGCGGCTTGCCGAGGA ACTGGGCAAGCGCCCACGCGCCAGCATCCCGATTTCGGCGTCGCTGCTGTAA
Upstream 100 bases:
>100_bases GAGTCGCTCGCGGTGGCACACGACAACTCGGGTAGGCGATGAACACGATGGTGCAAAGTGGTTTCTGGGCGGCGCGCGCT GTTGCGAAGGCGGTTGGCGC
Downstream 100 bases:
>100_bases CGCGTCCGGCCGGCTGCGGGTGCCGGCCGCTGGTAGAATTCGCCGTCTTCGCGCGGGCCGCTCGGCCCGCCGCCTTCCGT CTTCAAGGAACACCGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTGERRIAAHAVQGALAPHPRIRNVIAVGSGKGGVGKSTTAVNLALALRQLGARVGVLDADIYGPSVPAMLGLSGRPDSP DNKSIEPLRAFGIEAMSIGLLVDQDTPMIWRGPMATSALTQLFNDTLWDDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVI VTTPQDIATLDARKALKMFEKVEVPVLGIVENMAVHTCSNCGHREHLFGEGGGERMAAQYGVPLLGALPLVIAIREQGDV GQPIVVAAPESVAAQAYLAAATRLAEELGKRPRASIPISASLL
Sequences:
>Translated_283_residues MTGERRIAAHAVQGALAPHPRIRNVIAVGSGKGGVGKSTTAVNLALALRQLGARVGVLDADIYGPSVPAMLGLSGRPDSP DNKSIEPLRAFGIEAMSIGLLVDQDTPMIWRGPMATSALTQLFNDTLWDDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVI VTTPQDIATLDARKALKMFEKVEVPVLGIVENMAVHTCSNCGHREHLFGEGGGERMAAQYGVPLLGALPLVIAIREQGDV GQPIVVAAPESVAAQAYLAAATRLAEELGKRPRASIPISASLL >Mature_282_residues TGERRIAAHAVQGALAPHPRIRNVIAVGSGKGGVGKSTTAVNLALALRQLGARVGVLDADIYGPSVPAMLGLSGRPDSPD NKSIEPLRAFGIEAMSIGLLVDQDTPMIWRGPMATSALTQLFNDTLWDDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVIV TTPQDIATLDARKALKMFEKVEVPVLGIVENMAVHTCSNCGHREHLFGEGGGERMAAQYGVPLLGALPLVIAIREQGDVG QPIVVAAPESVAAQAYLAAATRLAEELGKRPRASIPISASLL
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=249, Percent_Identity=51.4056224899598, Blast_Score=260, Evalue=8e-70, Organism=Homo sapiens, GI6912540, Length=263, Percent_Identity=40.3041825095057, Blast_Score=183, Evalue=1e-46, Organism=Homo sapiens, GI118572611, Length=253, Percent_Identity=37.9446640316205, Blast_Score=170, Evalue=1e-42, Organism=Escherichia coli, GI87082045, Length=248, Percent_Identity=61.2903225806452, Blast_Score=308, Evalue=2e-85, Organism=Caenorhabditis elegans, GI25143050, Length=260, Percent_Identity=40, Blast_Score=173, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322188, Length=218, Percent_Identity=39.9082568807339, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=256, Percent_Identity=37.5, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI221511043, Length=247, Percent_Identity=40.8906882591093, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=44.2396313364055, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=37.2384937238494, Blast_Score=134, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 29623; Mature: 29492
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGERRIAAHAVQGALAPHPRIRNVIAVGSGKGGVGKSTTAVNLALALRQLGARVGVLDA CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC DIYGPSVPAMLGLSGRPDSPDNKSIEPLRAFGIEAMSIGLLVDQDTPMIWRGPMATSALT CCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEECCCCEEEECCCHHHHHH QLFNDTLWDDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMFE HHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHH KVEVPVLGIVENMAVHTCSNCGHREHLFGEGGGERMAAQYGVPLLGALPLVIAIREQGDV HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHEEEEEEECCCCC GQPIVVAAPESVAAQAYLAAATRLAEELGKRPRASIPISASLL CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC >Mature Secondary Structure TGERRIAAHAVQGALAPHPRIRNVIAVGSGKGGVGKSTTAVNLALALRQLGARVGVLDA CCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC DIYGPSVPAMLGLSGRPDSPDNKSIEPLRAFGIEAMSIGLLVDQDTPMIWRGPMATSALT CCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEECCCCEEEECCCHHHHHH QLFNDTLWDDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMFE HHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHH KVEVPVLGIVENMAVHTCSNCGHREHLFGEGGGERMAAQYGVPLLGALPLVIAIREQGDV HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHEEEEEEECCCCC GQPIVVAAPESVAAQAYLAAATRLAEELGKRPRASIPISASLL CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]