| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748645
Identifier: 77748645
GI number: 77748645
Start: 2702683
End: 2704302
Strand: Reverse
Name: 77748645
Synonym: XAC2311
Alternate gene names: NA
Gene position: 2704302-2702683 (Counterclockwise)
Preceding gene: 21243047
Following gene: 21243045
Centisome position: 52.25
GC content: 62.72
Gene sequence:
>1620_bases ATGGACAGGGGCAACACGTCGCGATGGTTGACGATTCCACTCTTGCTGGGCGCGCTGGTCGTGGCGTCGTGCAAGCAAGC CGAGGAACCCAAGGTGGCCGAAAAGAAGGCACCGGTGAAAGTCATCCTGGTTGAGGCGCAACTGCCGCCCAAACCGGTCA AGCCGCCGCTGCCGCCGTTGTTTTCGGACATCGAACGCCGCACTTTCCAGTTTTTCTGGGACACCACCAACGAGGTCAAC GGCCTGTCTCCGGACCGGTTTCCGTCGCGCCCGTTCGCCAGCATTGCGTCGGTCGGATTCGCGCTGACCGCCTATCCGAT CGGCATCGAAAACGGGTGGGTCAGTCGCAATCAGGCGATCGACCGCACCCTGACCACGCTGAAATTCTTCCGCGACGCGC CGATGGGGCCGCAGAAGACCGGCCGGGCCGGCTACAAGGGCTTCTACTATCATTTTCTGGACATGCAGCAGGGCAACCGC TACGACAGCTGGGTGGAGCTGTCGAGCGTGGACACTGCACTGCTGATGATGGGCGTGTTGTTCACCCAGTCGTATTACGA CGGCGAGGACCCGCGCGAAAAGGAGATCCGCCAGATCGCCGACACGCTGTACAAGCGCGTGGACTGGCGCTGGCTGCAAC AGCGCGCGCCGCTGATCTCGATGGGCTGGTTCCCCGAAAGCGGCTTCATCAACCACGACTGGATGGGCTACAACGAGGCG ATGATGCTGTACATCCTCGCCCTGGGCTCGCCGACGCATGGGGTCGATCCGGACGCATGGACCAGTTGGACCCGCACCTA CAACAACGACTGGGGCGTGTACCAGGGCCAGGAATACCTGTCGTTCGGCCCGCTGTTCGGCCACCAATACAGCCATGTCT GGATCGATTTCCGCGATATCCAGGACCAGTACATGCGCGAACGCGGCATCGACTACTTCCTCAACAGCCGCCGCGCCACC TTGGCGCAGCGCGACTACGCCATCGATAACCCGATGAAGTGGAAGGACTACGGCGAGAACGTCTGGGGCCTCACCGCCAG CGATGGCCCGCAGAACACCAGCCAGGAATACCGCGGCGAGCAGCGTCAATTCCGCCATTACTCTTCGCGCGGCGCCGGCC TGCGCGAGAATTTCGACGACGGCACCATCGTGCCCTCGGCGGCGATTTCTTCGATCGTGTTCGCTCCGGAAGTGGTGATC CCGGCCACCGAAGAAATGCACAAGCGCTATGGCGATTTCCTGTATTCCAGCTATGGCTTCCTGGATTCGTTCAATCCCAG CTTCAACTACGACATCCCGCTCAAGACCGGGCGCATGGTGCCGGATCGCGGCTGGGTGGCCAGCGACTACATCGCCATCG ACCAGGGCCCGATCCTGGCGATGATCGCCAACTACCAGAACGAATTCGTCTGGAACGTGATGAAGAAGAATCCCTACATC CGTGCGGGTCTGGAACGCGCCGGCTTTACCGGCGGCTGGCTCACTCCGGAGGGCGAGCCGCAGCCGGCGCCGCAGAAGGA CGAGCAGAAAGCCGCCGCGCGCGCGCTGGGCATGGCCGAATCGCGTGCCGCCGCCGCCCAGGCCCAGCAAGACCCCTCGC AACGCCAAAAACCCGAGTAA
Upstream 100 bases:
>100_bases GCTCGACCGCCCTGGCCGCAACGCCAGGGCGGTCGAACTCGGCGCCTGGATAGGGTAGGTTGGCGTGTCAGATGTAATCG ATTACACACGTGGGGGGCGG
Downstream 100 bases:
>100_bases TCCGTGCGCCTTTTGAAACTGTTGATGTTGGCCGTCGCCTTGTGTGCAGGTGCGACGGGATGCGAACGCTCCGATCCGGG CAAGACCACGGTGCGGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MDRGNTSRWLTIPLLLGALVVASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIVPSAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE
Sequences:
>Translated_539_residues MDRGNTSRWLTIPLLLGALVVASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIVPSAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE >Mature_539_residues MDRGNTSRWLTIPLLLGALVVASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIVPSAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61517; Mature: 61517
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRGNTSRWLTIPLLLGALVVASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPL CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHH FSDIERRTFQFFWDTTNEVNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGEDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHH MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDI HHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIVPSAAISSIVFAPEVVIPATEEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNPYI CCCCCCCCCEECCCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCCE RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE EECHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure MDRGNTSRWLTIPLLLGALVVASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPL CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHH FSDIERRTFQFFWDTTNEVNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGEDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHH MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDI HHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIVPSAAISSIVFAPEVVIPATEEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNPYI CCCCCCCCCEECCCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCCE RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE EECHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA