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The map label for this gene is nodV [H]

Identifier: 77748631

GI number: 77748631

Start: 2508639

End: 2509715

Strand: Direct

Name: nodV [H]

Synonym: XAC2149

Alternate gene names: 77748631

Gene position: 2508639-2509715 (Clockwise)

Preceding gene: 21242883

Following gene: 21242885

Centisome position: 48.47

GC content: 66.76

Gene sequence:

>1077_bases
ATGCGCATGACCTCTCTCTTCCGCTCGCCACCCACGCGTACCGACCTGCTTGGCATGGTCGGGCTGGTGGCGGGCATGGC
GGCGATCTTCGTGGCCGATACCTTCACCGACTATGCGGTGGCGGCTGCCTTGTTCTATACGTTGGTGGTGCTGCTGTCGG
TACGTCTGCTGACGCGCACGGGCGTGGTGCTGTTGGCGGGCACCTGCCTGGTGCTGATCGTGCTCAGCTTCCATCTCACC
CCGGCCGGCAGCTACCGGGTGGGCGTGATCAACTCCTGCATCAGCGCGGTGGTGGTGGCGGTCACCACGTATCTGGCGGT
GCAGATGGAAGCGGCCAAGGCCAGCGCACATGCCGCACAGGCGCGGCTGTTGCGGCTCACCCGCAGCGGCAGCATGGGCG
GGCTGGCCTCATCGATCGCGCACGAAGTCAATCAACCCTTGGCCGCCATCGTGACCAGTGGCAATGCCTGCCAGCGCTGG
TTGGCGCAGCAACCGCCCAACCTGGCCAAGGCCGCTGCCGCACTGGAACGCATGCTCGCCGACGCCGGCCGCGCCAGCGC
CATCATCGCGCGCATGCGTGCGCTGGCGCGTGGCGAAGCCAGCCAACGCCAGCCGCTGGATCTGAACCGCACCGTGCTCG
ACATGATCGCCCTCACCCGTGGCGAAACCGAGCGTCATGGCATCGCGCTGTCGCTGGAGCTGGACCCTGCCCTGCCCGCG
GTGCTGGCCGATGGCGTACAGATCCAGCAGGTCATCGGCAATCTGTTGCTCAACGCAGTGGAGGCACTGGCCACCTTGCC
GGACGAGGCGCGCAGCATCCAAATACGCTCGCACATCGATGGTGCGTGGGCATGCCTGTGCATCGACGATACCGGCCCGG
GGTTGTCCGACGACGCACTGGCGCATGTGTTCGAGGCATTCTGGAGCACCAAGGACGATGGCATGGGCATTGGCTTGAGC
ATCAGCCGCACCATCATGGAAGCCAACGGCGGGCAGATCTGGGCCGAGCCGGCCGGTGTACGCGGCGCGCGCTTCGGCCT
GCGTTTCCCCTTGGTCGCGACGGAGCGCAGGCAATGA

Upstream 100 bases:

>100_bases
CCAGCGGCCCGCACGCCCAAGCCCGCGGTTCCATGAATCACGCGCTGCATCCAGCGCCGGTTGCGTAACGGCGGCGCCGC
CAGCTGAGACAATCGCCGCC

Downstream 100 bases:

>100_bases
GCGAGCTGGCTCCGGTGGTGTATCTCATCGACGACGATGCCTCGATGCGCGCCGCGCTGGAGGATCTGTTCGCCTCGGTC
GGCTTGCAGGTCTATGCGTT

Product: nodulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRMTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRTGVVLLAGTCLVLIVLSFHLT
PAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHAAQARLLRLTRSGSMGGLASSIAHEVNQPLAAIVTSGNACQRW
LAQQPPNLAKAAAALERMLADAGRASAIIARMRALARGEASQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPA
VLADGVQIQQVIGNLLLNAVEALATLPDEARSIQIRSHIDGAWACLCIDDTGPGLSDDALAHVFEAFWSTKDDGMGIGLS
ISRTIMEANGGQIWAEPAGVRGARFGLRFPLVATERRQ

Sequences:

>Translated_358_residues
MRMTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRTGVVLLAGTCLVLIVLSFHLT
PAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHAAQARLLRLTRSGSMGGLASSIAHEVNQPLAAIVTSGNACQRW
LAQQPPNLAKAAAALERMLADAGRASAIIARMRALARGEASQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPA
VLADGVQIQQVIGNLLLNAVEALATLPDEARSIQIRSHIDGAWACLCIDDTGPGLSDDALAHVFEAFWSTKDDGMGIGLS
ISRTIMEANGGQIWAEPAGVRGARFGLRFPLVATERRQ
>Mature_358_residues
MRMTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRTGVVLLAGTCLVLIVLSFHLT
PAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHAAQARLLRLTRSGSMGGLASSIAHEVNQPLAAIVTSGNACQRW
LAQQPPNLAKAAAALERMLADAGRASAIIARMRALARGEASQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPA
VLADGVQIQQVIGNLLLNAVEALATLPDEARSIQIRSHIDGAWACLCIDDTGPGLSDDALAHVFEAFWSTKDDGMGIGLS
ISRTIMEANGGQIWAEPAGVRGARFGLRFPLVATERRQ

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=26.1603375527426, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=29.3617021276596, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=27.3109243697479, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081816, Length=261, Percent_Identity=27.5862068965517, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=26.3829787234043, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787894, Length=243, Percent_Identity=27.1604938271605, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 37830; Mature: 37830

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRT
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVVLLAGTCLVLIVLSFHLTPAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHAAQ
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLRLTRSGSMGGLASSIAHEVNQPLAAIVTSGNACQRWLAQQPPNLAKAAAALERMLA
HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
DAGRASAIIARMRALARGEASQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPA
HCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
VLADGVQIQQVIGNLLLNAVEALATLPDEARSIQIRSHIDGAWACLCIDDTGPGLSDDAL
HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCCCEEEEEEEECCCCCCCHHHH
AHVFEAFWSTKDDGMGIGLSISRTIMEANGGQIWAEPAGVRGARFGLRFPLVATERRQ
HHHHHHHHCCCCCCCEECHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRT
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVVLLAGTCLVLIVLSFHLTPAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHAAQ
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLRLTRSGSMGGLASSIAHEVNQPLAAIVTSGNACQRWLAQQPPNLAKAAAALERMLA
HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
DAGRASAIIARMRALARGEASQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPA
HCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
VLADGVQIQQVIGNLLLNAVEALATLPDEARSIQIRSHIDGAWACLCIDDTGPGLSDDAL
HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCCCEEEEEEEECCCCCCCHHHH
AHVFEAFWSTKDDGMGIGLSISRTIMEANGGQIWAEPAGVRGARFGLRFPLVATERRQ
HHHHHHHHCCCCCCCEECHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]