Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 77748552

Identifier: 77748552

GI number: 77748552

Start: 997859

End: 998560

Strand: Reverse

Name: 77748552

Synonym: XAC0836

Alternate gene names: NA

Gene position: 998560-997859 (Counterclockwise)

Preceding gene: 21241615

Following gene: 21241602

Centisome position: 19.29

GC content: 65.95

Gene sequence:

>702_bases
ATGACCATCCATCGCCTGCGCATCATGCTGTGCGCCCTCGCCCTCCTGTCCGGCCATGTGTACGCCGACGCCCTGCACAC
CGCTCCGGCGGTGCCGGCGCAGGTCTCCAATGCCGCTTGGGAAGAAGACATGCAACGCTTCGCCGAAAGCGACGCGCGTC
AGCCGCCGCCCAAGCACGGCATCGTGTTCGTCGGCAGCTCATCGATCCGGTTCTGGGAGACATTGGCACAGGATTTCCCG
GGCAAGCCGGTGATCAATCGCGGTTTCGGCGGCTCGGAAGTGCGCGACAGCACCTGGTACGCGGACCGCATCGTGATTCC
ATACGCGCCACGCCAGGTGGTGCTGTACGCCGGCGACAACGACCTCAACAGCGGCCGCACGCCCGAACAGGTGCGCGATG
ACGTGCTGGCATTCGTGGCACGTGTACGCCGCGACCTGCCCGAGGCACGCATCAGCTATCTGTCGATCAAGCCCAGCCCG
TCGCGCGCGCAACTGCTGCCGGCCGTGATCAAGGCCAACCGCCTGATCAAGGACGCGCTAGCCCCGCTGCCGCGCGTGGA
CTTCGTGGACATCTACACCCCGATGCTCGATGCCAGCGGCAAGCCGCGCGCGGAACTGTTCCGCGCCGACAGGCTGCATA
TGACGGCCGATGGGTACGCGATCTGGCGCAAGGTCGTGGCACCGGTATTGGAACAACGCTAG

Upstream 100 bases:

>100_bases
CTTGCACCGTGGCGACCCGCCCCGCCAGCCGCTGCCAGGTTTGCCCTCGGCTTCCAGCCTGGCGCACCATGGCAGCCCGC
TTCACTTTGAAGGTTCCTGC

Downstream 100 bases:

>100_bases
AACGCAACCGAGCCAATCCGGCGCGCCTGTCGCCGGATCGCCGGTCTGCAGGCGAGACGTTGGCTGCCGCTCCAGGGCGG
CACGTTGCATCGTGGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipolytic Protein G-D-S-L Family; Esterase/Lipase-Like Protein; Acyl-CoA Thioesterase; Beta-Lactamase/Acylhydrolase; Lipase/Acylhydrolase; Lysophospholipase; Lipolytic; Signal Peptide; Lipase/Phospolipase; Lipase/Acylhydrolase Family Protein; Secreted Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTIHRLRIMLCALALLSGHVYADALHTAPAVPAQVSNAAWEEDMQRFAESDARQPPPKHGIVFVGSSSIRFWETLAQDFP
GKPVINRGFGGSEVRDSTWYADRIVIPYAPRQVVLYAGDNDLNSGRTPEQVRDDVLAFVARVRRDLPEARISYLSIKPSP
SRAQLLPAVIKANRLIKDALAPLPRVDFVDIYTPMLDASGKPRAELFRADRLHMTADGYAIWRKVVAPVLEQR

Sequences:

>Translated_233_residues
MTIHRLRIMLCALALLSGHVYADALHTAPAVPAQVSNAAWEEDMQRFAESDARQPPPKHGIVFVGSSSIRFWETLAQDFP
GKPVINRGFGGSEVRDSTWYADRIVIPYAPRQVVLYAGDNDLNSGRTPEQVRDDVLAFVARVRRDLPEARISYLSIKPSP
SRAQLLPAVIKANRLIKDALAPLPRVDFVDIYTPMLDASGKPRAELFRADRLHMTADGYAIWRKVVAPVLEQR
>Mature_232_residues
TIHRLRIMLCALALLSGHVYADALHTAPAVPAQVSNAAWEEDMQRFAESDARQPPPKHGIVFVGSSSIRFWETLAQDFPG
KPVINRGFGGSEVRDSTWYADRIVIPYAPRQVVLYAGDNDLNSGRTPEQVRDDVLAFVARVRRDLPEARISYLSIKPSPS
RAQLLPAVIKANRLIKDALAPLPRVDFVDIYTPMLDASGKPRAELFRADRLHMTADGYAIWRKVVAPVLEQR

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26022; Mature: 25891

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHRLRIMLCALALLSGHVYADALHTAPAVPAQVSNAAWEEDMQRFAESDARQPPPKHG
CCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IVFVGSSSIRFWETLAQDFPGKPVINRGFGGSEVRDSTWYADRIVIPYAPRQVVLYAGDN
EEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEECCEEEEECCCCEEEEEECCC
DLNSGRTPEQVRDDVLAFVARVRRDLPEARISYLSIKPSPSRAQLLPAVIKANRLIKDAL
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
APLPRVDFVDIYTPMLDASGKPRAELFRADRLHMTADGYAIWRKVVAPVLEQR
CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIHRLRIMLCALALLSGHVYADALHTAPAVPAQVSNAAWEEDMQRFAESDARQPPPKHG
CHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IVFVGSSSIRFWETLAQDFPGKPVINRGFGGSEVRDSTWYADRIVIPYAPRQVVLYAGDN
EEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEECCEEEEECCCCEEEEEECCC
DLNSGRTPEQVRDDVLAFVARVRRDLPEARISYLSIKPSPSRAQLLPAVIKANRLIKDAL
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
APLPRVDFVDIYTPMLDASGKPRAELFRADRLHMTADGYAIWRKVVAPVLEQR
CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA