| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748532
Identifier: 77748532
GI number: 77748532
Start: 613334
End: 614656
Strand: Reverse
Name: 77748532
Synonym: XAC0523
Alternate gene names: NA
Gene position: 614656-613334 (Counterclockwise)
Preceding gene: 21241295
Following gene: 21241293
Centisome position: 11.88
GC content: 74.3
Gene sequence:
>1323_bases ATGTCCGAGACTCCGCCACCGCGCCGCCCCCTGGCCACGTTCCTGCGTGCGACGCCGGCCGCTCCGCCGCTGGTGCCCAC CCCGCTGGTTCCGCCTGTGGAGCCGCCGGAGCAGGCCATACCGGCCCCAGGCTCTGCGTTGCCGCCGGCAACACCGCCGC CGGTGGACGCGCAGCAGGCGCTGCGCGTGCCATCGCCTGCCGCCGCGGTGGCTGCGTCGCCGCATCGCGCAACGGGCACG CCCGGGCACGATGGTGTCCAGGCGCCAGTGTCCGGCGAGACGCAACTGCCCGCGCCCGGCACCACGATGCCGTCCGCTTC GGCGACCGCACTCGCGGCCGGACGCGTCTCTGATGCGATGGGCGATCCACCTCGCCCGGCGTCGGCCGCCAGCGACGCCC ACGCCAGCGATGACGGGCTGGCCCCGATCGATGCCGCGACCGATGACGCCCTCCAAGACCCAACCGCGCGGACTGCACCT GTCCCGTTGAATTCAGCGCAGCAACGTGCGCCACGTGCGTCGGCGGATGCAGACCTGCCGTCCCGGAATGCGCCGGGTAC GTCGAAGGCGCTCACGGAAACGACCGAGCGGCAGGTTCCAACCGCAGCGGCGGCAGCCGCAACGCAGGCCGATACCATCG GCAGCGAGCGGACGGCGAGCACACCCGACGGCCAGTCGCACCCGGGCCGCCCCTCCAGCCATCCGGACCCGGCAACCACC GAGTTCGGCGAGGACGCGCAGTGCGATGCCGGCATCGCGCAGTCCCGCCCCTCCCCTGCGCAGTTGCAGCCCCTGCCCGC TCCCGCCTTGACCGCGCCCGCCTTCGCGCGGCGTGGCGTCACCCGGCCGGGGCTACGCGCCAGCGGGCGCCAGTGGGCGC TGTTGGTCGGGCTGGTCGGCGTGCTCGGGTTGCAGATCGTCATCGCCGACCGCGCGCACCTGGCCACCAGCCCGCGCTGG CGGCCGCTGATCAGCGCGGCCTGCACGCTGGCGCGCTGCAGCGTGCCGGCCTGGCGCGAGCCGGAGGCGCTGACCCTGCT CAACCGCGACGTGCGCCCGCTGCCCGGCGTGGCCGGGGTGCTGCAGATCCAGGCCAGCTTCCGCAACGACGCGCGCTGGG CACAGGCTTGGCCGTGGCTGCAGCTGTCGCTGTCCGATGCCGACGGCCGGGTGATCGGCACCCGCATCTTGTCGCCGCAG GACTATCTGGGACAGTCGCCGGCTGCGCAGGACACGCTGGCGCCGGGTCAGGCGGTGCAGGTCGCGTTTCGGGTGCGCGA ACCGGCCGCGAGCACCGCTGCCTTCAGTTTCGACTTCCGGTGA
Upstream 100 bases:
>100_bases CAGGCATGCGCGCTGCGGGTTGATCGCATCGCCGCCGGCACAGGTTCGCCGTTGGACGTGCACGTGGTTGAATAAGGGTC TTCCCGCTGCACGCCTGCCG
Downstream 100 bases:
>100_bases ACGGGCGCGACCGCCACGTGGGCGTGGCGAGCGATGAGGTCACGCGCTAGACTCACTCCCCCTCGCCGGCCACGCGTCCC GGCTTCGTGACACTGGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSETPPPRRPLATFLRATPAAPPLVPTPLVPPVEPPEQAIPAPGSALPPATPPPVDAQQALRVPSPAAAVAASPHRATGT PGHDGVQAPVSGETQLPAPGTTMPSASATALAAGRVSDAMGDPPRPASAASDAHASDDGLAPIDAATDDALQDPTARTAP VPLNSAQQRAPRASADADLPSRNAPGTSKALTETTERQVPTAAAAAATQADTIGSERTASTPDGQSHPGRPSSHPDPATT EFGEDAQCDAGIAQSRPSPAQLQPLPAPALTAPAFARRGVTRPGLRASGRQWALLVGLVGVLGLQIVIADRAHLATSPRW RPLISAACTLARCSVPAWREPEALTLLNRDVRPLPGVAGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRILSPQ DYLGQSPAAQDTLAPGQAVQVAFRVREPAASTAAFSFDFR
Sequences:
>Translated_440_residues MSETPPPRRPLATFLRATPAAPPLVPTPLVPPVEPPEQAIPAPGSALPPATPPPVDAQQALRVPSPAAAVAASPHRATGT PGHDGVQAPVSGETQLPAPGTTMPSASATALAAGRVSDAMGDPPRPASAASDAHASDDGLAPIDAATDDALQDPTARTAP VPLNSAQQRAPRASADADLPSRNAPGTSKALTETTERQVPTAAAAAATQADTIGSERTASTPDGQSHPGRPSSHPDPATT EFGEDAQCDAGIAQSRPSPAQLQPLPAPALTAPAFARRGVTRPGLRASGRQWALLVGLVGVLGLQIVIADRAHLATSPRW RPLISAACTLARCSVPAWREPEALTLLNRDVRPLPGVAGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRILSPQ DYLGQSPAAQDTLAPGQAVQVAFRVREPAASTAAFSFDFR >Mature_439_residues SETPPPRRPLATFLRATPAAPPLVPTPLVPPVEPPEQAIPAPGSALPPATPPPVDAQQALRVPSPAAAVAASPHRATGTP GHDGVQAPVSGETQLPAPGTTMPSASATALAAGRVSDAMGDPPRPASAASDAHASDDGLAPIDAATDDALQDPTARTAPV PLNSAQQRAPRASADADLPSRNAPGTSKALTETTERQVPTAAAAAATQADTIGSERTASTPDGQSHPGRPSSHPDPATTE FGEDAQCDAGIAQSRPSPAQLQPLPAPALTAPAFARRGVTRPGLRASGRQWALLVGLVGVLGLQIVIADRAHLATSPRWR PLISAACTLARCSVPAWREPEALTLLNRDVRPLPGVAGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRILSPQD YLGQSPAAQDTLAPGQAVQVAFRVREPAASTAAFSFDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45168; Mature: 45037
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPPPRRPLATFLRATPAAPPLVPTPLVPPVEPPEQAIPAPGSALPPATPPPVDAQQA CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH LRVPSPAAAVAASPHRATGTPGHDGVQAPVSGETQLPAPGTTMPSASATALAAGRVSDAM HCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GDPPRPASAASDAHASDDGLAPIDAATDDALQDPTARTAPVPLNSAQQRAPRASADADLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCC SRNAPGTSKALTETTERQVPTAAAAAATQADTIGSERTASTPDGQSHPGRPSSHPDPATT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EFGEDAQCDAGIAQSRPSPAQLQPLPAPALTAPAFARRGVTRPGLRASGRQWALLVGLVG CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH VLGLQIVIADRAHLATSPRWRPLISAACTLARCSVPAWREPEALTLLNRDVRPLPGVAGV HHHHEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEE LQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRILSPQDYLGQSPAAQDTLAPGQAVQ EEEEHHHCCCCCHHHCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHCCCCHHEE VAFRVREPAASTAAFSFDFR EEEEHHCCCCCCEEEEECCC >Mature Secondary Structure SETPPPRRPLATFLRATPAAPPLVPTPLVPPVEPPEQAIPAPGSALPPATPPPVDAQQA CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH LRVPSPAAAVAASPHRATGTPGHDGVQAPVSGETQLPAPGTTMPSASATALAAGRVSDAM HCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GDPPRPASAASDAHASDDGLAPIDAATDDALQDPTARTAPVPLNSAQQRAPRASADADLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCC SRNAPGTSKALTETTERQVPTAAAAAATQADTIGSERTASTPDGQSHPGRPSSHPDPATT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EFGEDAQCDAGIAQSRPSPAQLQPLPAPALTAPAFARRGVTRPGLRASGRQWALLVGLVG CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH VLGLQIVIADRAHLATSPRWRPLISAACTLARCSVPAWREPEALTLLNRDVRPLPGVAGV HHHHEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEE LQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRILSPQDYLGQSPAAQDTLAPGQAVQ EEEEHHHCCCCCHHHCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHCCCCHHEE VAFRVREPAASTAAFSFDFR EEEEHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA