Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 77748527

Identifier: 77748527

GI number: 77748527

Start: 556504

End: 558258

Strand: Reverse

Name: 77748527

Synonym: XAC0466

Alternate gene names: NA

Gene position: 558258-556504 (Counterclockwise)

Preceding gene: 21241240

Following gene: 77748526

Centisome position: 10.79

GC content: 63.3

Gene sequence:

>1755_bases
ATGGCAACCGATCGCGAAACTGGGCTGCTGCAGGCAGCCTATGCAGCGGGAATCACCCGGCCAAACGAATTGGCCAATTT
CATGGCACAGGTAGGCCACGAATCGGGCGGACTCAATCGCCTGGAAGAAGGGTTCCGCTATACACGCGGCTCCTCGCAAG
TGAGCTCGAAAGTGCGTTCTGCACTGCGCGAAGGACCGGAGGCGCTGGAAGAAGCGCGCCTGGAAGCATTGCGCGGCCAG
CCTGAGAAACTCGCCGAATTGATGTATGGCGGGCGTATGGGGAACAACGAGCCCGGCGATGGTTATCTTTACCGTGGTCG
CGGCTACATCCAGCTCACCGGCAAGGATCAGTATCGCGAGGCCGGCGAAGCGTTGAAACTCGACCTGGTCGCACACCCCG
AACTGGCCGCGCAACCGGAAAACGCGTCGCGGATCGCAACCTGGTACTGGCAGCACAATGTGCCGCAAGCGGCCAGGCAG
GATGCGCATGCAGCAGGCGTTGCGATCAACGGCGGCGATCCGCCGAATGGGCTGGCCGACCGCGAAAGCCGCTTCGCGCG
CTGGCAGCGCGACCTCACGCCCGATGTGATGCACAAGCTCGAACACGGTCAACTCGGACAGACGGTCGCACCCGCGCAGC
ATTCGGCACCGGCGCAAACACCGCATGCCGGTTCGAACGCGCATTCGTTCCAGGCCACCATGGAGCGCATGCTTCCGCCG
CAGAGCGGCACTGCGCCGCATGTCACCGGGCATTATGGCGAGCACCGCAGCGCGCGCGACCACGGCGGCACCGACTTCAA
TTATCAGGGCGGTCAGGCAGGACGCAATCTGCAGCATCCAACCGTGCATTCGCCCGTCGCCGGAACGGTGACCTTTGCCG
GCGGAAGCTACGGCACCGTCAAGATTCGCGATGCACAAGGCAATTCGCACGAGATCCTGCATCTGGATGGCGTCAAGGTC
AAAGAAGGGCAAACGCTGTCGGCAGGCGATGCCATCGGCACGATGGGGGGACGTGGACCCAATGGCGCAAGCCAATATGC
GCAGCATGTGCATTACCAATTGCGCGATGCCAACGGCAAGTTGACCAGCCCCGAGAACTTCTGGAATCAGGGTCACCAAC
ACCAAGCGGGTGCGCGGCACACCCAGGCAGCATCGGCAAGTGGCACAGGTGCCGTGCGGCATGGCGACAGCAGTCAGGAT
GTGGGTAAGCTGCAGCAGGACCTCAACCGTCTGGGCGTGCGCGATGCGCAGGGCAACCGACTGGCCGAGGATGGCCGTTT
CGGCGACAACACGCGTGAGGCGGTGATGGCGTTCCAGAAGCAGCATGGGCTGCAGCAGGACGGTGTTGTTGGCCGCGACA
CGCGGGCAGCGTTGTCTGCGCAACCGGTGCAGACCCGCGAGGCGCAGGTTGCTGCGCCCAAAGGGCCTTCGCTCAACGAT
GCATCGCACCCTGACCACGCGCTACATAACGCAATCCGCAGCAAGCTGCCGAGCATGATCTCCAACGAGACCGCGGCACA
TGTCACGCTGCAGGCGAAGCAGAATGGGATCGACAGCGCGGACAAGTTGCAGAACGTGACAGTGCAGGACGGCAAGGCGT
TCGTCATGGGCACCACGCCGGGCTTCCGTGCGGCGGTGGACCTGAACCAACCTGCCCCGACACTTGAGCAAACCAGCGCA
CAGTTGCTGGCTGGTCAGTCGCAGCAGCAACAGGCCCAGCAAGAACAGCAGAAGGTTGCGATGGGCGGTCGCTGA

Upstream 100 bases:

>100_bases
TGAGGCTGGAGCCCAGGAACAACATTAAAGGGAAGTAATGGCTTGCGCGGACAAGGATGGGTCCGTTTTTTCATGTTGCT
GAGAAATGAGGAGTTACACC

Downstream 100 bases:

>100_bases
TCTTTCGGCGAAAGATCAAAAGACGCCGGCCAGGACATTGGCCGGCGTTTTTGTTCCCACATGCGCTGTGGCCGGAACGG
CATCATTGCGCCATCTGATC

Product: lytic enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MATDRETGLLQAAYAAGITRPNELANFMAQVGHESGGLNRLEEGFRYTRGSSQVSSKVRSALREGPEALEEARLEALRGQ
PEKLAELMYGGRMGNNEPGDGYLYRGRGYIQLTGKDQYREAGEALKLDLVAHPELAAQPENASRIATWYWQHNVPQAARQ
DAHAAGVAINGGDPPNGLADRESRFARWQRDLTPDVMHKLEHGQLGQTVAPAQHSAPAQTPHAGSNAHSFQATMERMLPP
QSGTAPHVTGHYGEHRSARDHGGTDFNYQGGQAGRNLQHPTVHSPVAGTVTFAGGSYGTVKIRDAQGNSHEILHLDGVKV
KEGQTLSAGDAIGTMGGRGPNGASQYAQHVHYQLRDANGKLTSPENFWNQGHQHQAGARHTQAASASGTGAVRHGDSSQD
VGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQVAAPKGPSLND
ASHPDHALHNAIRSKLPSMISNETAAHVTLQAKQNGIDSADKLQNVTVQDGKAFVMGTTPGFRAAVDLNQPAPTLEQTSA
QLLAGQSQQQQAQQEQQKVAMGGR

Sequences:

>Translated_584_residues
MATDRETGLLQAAYAAGITRPNELANFMAQVGHESGGLNRLEEGFRYTRGSSQVSSKVRSALREGPEALEEARLEALRGQ
PEKLAELMYGGRMGNNEPGDGYLYRGRGYIQLTGKDQYREAGEALKLDLVAHPELAAQPENASRIATWYWQHNVPQAARQ
DAHAAGVAINGGDPPNGLADRESRFARWQRDLTPDVMHKLEHGQLGQTVAPAQHSAPAQTPHAGSNAHSFQATMERMLPP
QSGTAPHVTGHYGEHRSARDHGGTDFNYQGGQAGRNLQHPTVHSPVAGTVTFAGGSYGTVKIRDAQGNSHEILHLDGVKV
KEGQTLSAGDAIGTMGGRGPNGASQYAQHVHYQLRDANGKLTSPENFWNQGHQHQAGARHTQAASASGTGAVRHGDSSQD
VGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQVAAPKGPSLND
ASHPDHALHNAIRSKLPSMISNETAAHVTLQAKQNGIDSADKLQNVTVQDGKAFVMGTTPGFRAAVDLNQPAPTLEQTSA
QLLAGQSQQQQAQQEQQKVAMGGR
>Mature_583_residues
ATDRETGLLQAAYAAGITRPNELANFMAQVGHESGGLNRLEEGFRYTRGSSQVSSKVRSALREGPEALEEARLEALRGQP
EKLAELMYGGRMGNNEPGDGYLYRGRGYIQLTGKDQYREAGEALKLDLVAHPELAAQPENASRIATWYWQHNVPQAARQD
AHAAGVAINGGDPPNGLADRESRFARWQRDLTPDVMHKLEHGQLGQTVAPAQHSAPAQTPHAGSNAHSFQATMERMLPPQ
SGTAPHVTGHYGEHRSARDHGGTDFNYQGGQAGRNLQHPTVHSPVAGTVTFAGGSYGTVKIRDAQGNSHEILHLDGVKVK
EGQTLSAGDAIGTMGGRGPNGASQYAQHVHYQLRDANGKLTSPENFWNQGHQHQAGARHTQAASASGTGAVRHGDSSQDV
GKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQVAAPKGPSLNDA
SHPDHALHNAIRSKLPSMISNETAAHVTLQAKQNGIDSADKLQNVTVQDGKAFVMGTTPGFRAAVDLNQPAPTLEQTSAQ
LLAGQSQQQQAQQEQQKVAMGGR

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage D29 and phage L5 gp10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000726 [H]

Pfam domain/function: PF00182 Glyco_hydro_19 [H]

EC number: NA

Molecular weight: Translated: 62536; Mature: 62404

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDRETGLLQAAYAAGITRPNELANFMAQVGHESGGLNRLEEGFRYTRGSSQVSSKVRS
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
ALREGPEALEEARLEALRGQPEKLAELMYGGRMGNNEPGDGYLYRGRGYIQLTGKDQYRE
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCHHHHH
AGEALKLDLVAHPELAAQPENASRIATWYWQHNVPQAARQDAHAAGVAINGGDPPNGLAD
CCCEEEEEEEECCHHHCCCCCCCEEEEEEEECCCCHHHHHCCHHCCEEECCCCCCCCCCH
RESRFARWQRDLTPDVMHKLEHGQLGQTVAPAQHSAPAQTPHAGSNAHSFQATMERMLPP
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
QSGTAPHVTGHYGEHRSARDHGGTDFNYQGGQAGRNLQHPTVHSPVAGTVTFAGGSYGTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
KIRDAQGNSHEILHLDGVKVKEGQTLSAGDAIGTMGGRGPNGASQYAQHVHYQLRDANGK
EEECCCCCCCEEEEECCEEECCCCEECCCCCHHCCCCCCCCHHHHHHHHHHHEEECCCCC
LTSPENFWNQGHQHQAGARHTQAASASGTGAVRHGDSSQDVGKLQQDLNRLGVRDAQGNR
CCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCC
LAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQVAAPKGPSLND
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCC
ASHPDHALHNAIRSKLPSMISNETAAHVTLQAKQNGIDSADKLQNVTVQDGKAFVMGTTP
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHCCCEEECCCEEEEECCC
GFRAAVDLNQPAPTLEQTSAQLLAGQSQQQQAQQEQQKVAMGGR
CCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATDRETGLLQAAYAAGITRPNELANFMAQVGHESGGLNRLEEGFRYTRGSSQVSSKVRS
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
ALREGPEALEEARLEALRGQPEKLAELMYGGRMGNNEPGDGYLYRGRGYIQLTGKDQYRE
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCHHHHH
AGEALKLDLVAHPELAAQPENASRIATWYWQHNVPQAARQDAHAAGVAINGGDPPNGLAD
CCCEEEEEEEECCHHHCCCCCCCEEEEEEEECCCCHHHHHCCHHCCEEECCCCCCCCCCH
RESRFARWQRDLTPDVMHKLEHGQLGQTVAPAQHSAPAQTPHAGSNAHSFQATMERMLPP
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
QSGTAPHVTGHYGEHRSARDHGGTDFNYQGGQAGRNLQHPTVHSPVAGTVTFAGGSYGTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
KIRDAQGNSHEILHLDGVKVKEGQTLSAGDAIGTMGGRGPNGASQYAQHVHYQLRDANGK
EEECCCCCCCEEEEECCEEECCCCEECCCCCHHCCCCCCCCHHHHHHHHHHHEEECCCCC
LTSPENFWNQGHQHQAGARHTQAASASGTGAVRHGDSSQDVGKLQQDLNRLGVRDAQGNR
CCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCC
LAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQVAAPKGPSLND
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCC
ASHPDHALHNAIRSKLPSMISNETAAHVTLQAKQNGIDSADKLQNVTVQDGKAFVMGTTP
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHCCCEEECCCEEEEECCC
GFRAAVDLNQPAPTLEQTSAQLLAGQSQQQQAQQEQQKVAMGGR
CCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]