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The map label for this gene is glgB2 [H]

Identifier: 77748524

GI number: 77748524

Start: 503085

End: 505268

Strand: Direct

Name: glgB2 [H]

Synonym: XAC0426

Alternate gene names: 77748524

Gene position: 503085-505268 (Clockwise)

Preceding gene: 21241198

Following gene: 21241200

Centisome position: 9.72

GC content: 67.72

Gene sequence:

>2184_bases
GTGACCACGGAAGGGATCTCGGAAATGTCGCAGACCCTGCAAGCCCTGGCCGACGGCTTGCCGGCCGATGCCTTTGCGGT
GCTTGGACCGAAGCTGCTGGCCGATGGCCGCCGTCAGGTGCGCGTGTTGGCCCCGGGTGCCGAGGCGATGGGCTTGATCG
ACCCCCGCGGCAAGCTGCTCGCGCGCATGCAGGCCAGCGCCATCGATGGCGTCTTCGAAGGCACTCTGGCGGTCGATGGG
CCGTACCGGCTGCGTATCGTGTGGCCAGACCGGGTGCAGGAGGTCGAAGACCCGTACGCGTTTGCGGCCACGCTGGACGA
ATCGCTGTTGCTGCAGATCGCTGCAGGCGACGGCCAGGCGTTGCGCCGTGCGCTGGGCGCGCAGCATCTCCACTGTGGCG
ACGTGCCGGGCGTGCGCTTCGCGCTGTGGGCACCCCATGCCCAGCGCGTGGCGGTGGTCGGCGACTTCAACGGATGGGAC
GTGCGGCGGCATCCGATGCGGCAGCGCATCGGTGGCTTCTGGGAACTCTTCCTCCCGCGCGTGGACGCTGGCGCCCGGTA
CAAGTATGCCGTCACCGCAGCCGATGGGCGGGTGCTGCTCAAGGCCGACCCGGTGGCGCGGCAGACCGAATTGCCGCCGG
CAACCGCATCGGTGGTGCCCAGCGCCGCCACATTCGCCTGGACCGACGCGGCCTGGATGGCCAACCGCGACCCCGCCGCC
GTGCCGGGGCCGCTGTCGATCTACGAGGTGCATGCCGCGTCCTGGCGTCGCGACGGACACAACCAGCCGCTGGACTGGCC
AACCCTGGCCGAGCAGTTGATTCCCTATGTGCAGCAGCTCGGCTTCACCCATATCGAATTGCTGCCGATCACCGAACACC
CGTTTGGCGGTTCCTGGGGCTATCAGCCGCTGGGCCTGTATGCGCCCACCGCGCGCCATGGCAGCCCGGACGGCTTTGCG
CAGTTCGTCGACGCCTGCCATCGCGCCGGTATCGGCGTGATCCTGGATTGGGTCAGTGCGCACTTTCCCGATGACGCGCA
CGGGCTGGCCCAGTTCGACGGCGCCGCGCTGTATGAGCATGCCGACCCGCGCGAAGGCATGCATCGCGACTGGAATACGC
TGATCTACAACTACGGCCGGCCGGAAGTGACCGCTTACCTGCTGGGCAGCGCGCTGGAATGGATCGAGCATTACCACCTC
GACGGCCTGCGCGTGGATGCGGTGGCCTCGATGCTGTATCGCGACTACGGCCGTGCCGAAGGCGAGTGGGTGCCCAACGC
GCATGGCGGCCGCGAGAATCTGGAGGCGGTCGCGTTCCTGCGCCAGCTCAACCGCGACATCGCCACGCAGTTCCCCGGCG
TGCTCACCATCGCCGAAGAATCGACCGCCTGGCCGGGCGTGACCGCCGCGATCAGCGATGGCGGCCTGGGCTTCACGCAC
AAATGGAACATGGGCTGGATGCACGACACGCTGGGCTACATGCAGCGCGATCCGGCCGAACGTGCGCATCACCATAGCCA
GCTCACCTTCGGGCTGGTGTACGCATTCGACGAACGCTTCGTGTTGCCGCTCTCCCACGATGAAGTGGTGCACGGCACCG
GTGGCCTGCTCGGGCAGATGCCGGGCGACGACTGGCGCCGCTTCGCCAACCTGCGCGCCTATCTGGCCCTGATGTGGGCG
CACCCGGGCGACAAACTGCTGTTCATGGGCGCCGAATTCGGGCAATGGGCCGACTGGAATCACGACCAGTCGCTGGATTG
GCATCTGCTGGATGGCGCGCGGCATCGTGGCATGCAGCAACTGGTGGGCGATCTCAACGCCGCACTGCGCCGCACGCCGG
CGCTGTATCGCGGCACCCATCGCGCTGAAGGCTTCGACTGGAGCGTGGCCGACGATGCGCGCAACAGCGTGCTGGCGTTC
GTCCGCCACGATCCTGACGGTGGCGCACCGTTGCTGGCAGTGAGCAACCTCACCCCGCAACCGCACCACGACTATCACGT
GGGGGTGCCGCGTGCCGGCCTCTGGCGCGAGATCCTCAACACCGACAGTGCCCATTACGGCGGCAGCAACCTCGGCAACA
GCGGTCGCTTGGCGACCGAGCCGGTGGGCATGCATGGGCATGCGCAACGTCTGCGCCTGACCCTGCCGCCGCTGGCCACG
ATCTATCTGCAAGCGGAGAAATAA

Upstream 100 bases:

>100_bases
TCTCGCTCTACGAACACACCGCTGCCACCGCGCCCGCGCTCGCGACGGTGCCATGAGCGAACGGCAGGGCGGGCAGGAGC
AGCGCACGGAAGCGGACGGC

Downstream 100 bases:

>100_bases
CAATGAACCAGCGCGATGCGATCACACCGGCCTGGGGCGCCTGGCCGGCGGGTGAGGGACAGGTGCGCTTTGCGCTCTGG
GCTCCAGAAGCCAAGAACGT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1; Glycogen-branching enzyme 1; BE 1 [H]

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTTEGISEMSQTLQALADGLPADAFAVLGPKLLADGRRQVRVLAPGAEAMGLIDPRGKLLARMQASAIDGVFEGTLAVDG
PYRLRIVWPDRVQEVEDPYAFAATLDESLLLQIAAGDGQALRRALGAQHLHCGDVPGVRFALWAPHAQRVAVVGDFNGWD
VRRHPMRQRIGGFWELFLPRVDAGARYKYAVTAADGRVLLKADPVARQTELPPATASVVPSAATFAWTDAAWMANRDPAA
VPGPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSPDGFA
QFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHL
DGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNRDIATQFPGVLTIAEESTAWPGVTAAISDGGLGFTH
KWNMGWMHDTLGYMQRDPAERAHHHSQLTFGLVYAFDERFVLPLSHDEVVHGTGGLLGQMPGDDWRRFANLRAYLALMWA
HPGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQLVGDLNAALRRTPALYRGTHRAEGFDWSVADDARNSVLAF
VRHDPDGGAPLLAVSNLTPQPHHDYHVGVPRAGLWREILNTDSAHYGGSNLGNSGRLATEPVGMHGHAQRLRLTLPPLAT
IYLQAEK

Sequences:

>Translated_727_residues
MTTEGISEMSQTLQALADGLPADAFAVLGPKLLADGRRQVRVLAPGAEAMGLIDPRGKLLARMQASAIDGVFEGTLAVDG
PYRLRIVWPDRVQEVEDPYAFAATLDESLLLQIAAGDGQALRRALGAQHLHCGDVPGVRFALWAPHAQRVAVVGDFNGWD
VRRHPMRQRIGGFWELFLPRVDAGARYKYAVTAADGRVLLKADPVARQTELPPATASVVPSAATFAWTDAAWMANRDPAA
VPGPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSPDGFA
QFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHL
DGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNRDIATQFPGVLTIAEESTAWPGVTAAISDGGLGFTH
KWNMGWMHDTLGYMQRDPAERAHHHSQLTFGLVYAFDERFVLPLSHDEVVHGTGGLLGQMPGDDWRRFANLRAYLALMWA
HPGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQLVGDLNAALRRTPALYRGTHRAEGFDWSVADDARNSVLAF
VRHDPDGGAPLLAVSNLTPQPHHDYHVGVPRAGLWREILNTDSAHYGGSNLGNSGRLATEPVGMHGHAQRLRLTLPPLAT
IYLQAEK
>Mature_726_residues
TTEGISEMSQTLQALADGLPADAFAVLGPKLLADGRRQVRVLAPGAEAMGLIDPRGKLLARMQASAIDGVFEGTLAVDGP
YRLRIVWPDRVQEVEDPYAFAATLDESLLLQIAAGDGQALRRALGAQHLHCGDVPGVRFALWAPHAQRVAVVGDFNGWDV
RRHPMRQRIGGFWELFLPRVDAGARYKYAVTAADGRVLLKADPVARQTELPPATASVVPSAATFAWTDAAWMANRDPAAV
PGPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSPDGFAQ
FVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLD
GLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNRDIATQFPGVLTIAEESTAWPGVTAAISDGGLGFTHK
WNMGWMHDTLGYMQRDPAERAHHHSQLTFGLVYAFDERFVLPLSHDEVVHGTGGLLGQMPGDDWRRFANLRAYLALMWAH
PGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQLVGDLNAALRRTPALYRGTHRAEGFDWSVADDARNSVLAFV
RHDPDGGAPLLAVSNLTPQPHHDYHVGVPRAGLWREILNTDSAHYGGSNLGNSGRLATEPVGMHGHAQRLRLTLPPLATI
YLQAEK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=704, Percent_Identity=27.2727272727273, Blast_Score=198, Evalue=1e-50,
Organism=Escherichia coli, GI1789839, Length=724, Percent_Identity=51.9337016574586, Blast_Score=715, Evalue=0.0,
Organism=Escherichia coli, GI2367229, Length=336, Percent_Identity=29.4642857142857, Blast_Score=79, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17554896, Length=627, Percent_Identity=25.518341307815, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI32564391, Length=613, Percent_Identity=24.6329526916803, Blast_Score=160, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320826, Length=664, Percent_Identity=24.5481927710843, Blast_Score=157, Evalue=4e-39,
Organism=Drosophila melanogaster, GI28573410, Length=639, Percent_Identity=26.60406885759, Blast_Score=185, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 80106; Mature: 79975

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEGISEMSQTLQALADGLPADAFAVLGPKLLADGRRQVRVLAPGAEAMGLIDPRGKLL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHCCCCEEEEECCCCHHCCCCCCHHHHH
ARMQASAIDGVFEGTLAVDGPYRLRIVWPDRVQEVEDPYAFAATLDESLLLQIAAGDGQA
HHHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHCCCHHHHHHCCCEEEEEEECCCHHH
LRRALGAQHLHCGDVPGVRFALWAPHAQRVAVVGDFNGWDVRRHPMRQRIGGFWELFLPR
HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHC
VDAGARYKYAVTAADGRVLLKADPVARQTELPPATASVVPSAATFAWTDAAWMANRDPAA
CCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCEEEECCHHHCCCCCCCC
VPGPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWG
CCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
YQPLGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
ADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAE
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GEWVPNAHGGRENLEAVAFLRQLNRDIATQFPGVLTIAEESTAWPGVTAAISDGGLGFTH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCEEE
KWNMGWMHDTLGYMQRDPAERAHHHSQLTFGLVYAFDERFVLPLSHDEVVHGTGGLLGQM
ECCCCCHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCC
PGDDWRRFANLRAYLALMWAHPGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQ
CCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHCCHHH
LVGDLNAALRRTPALYRGTHRAEGFDWSVADDARNSVLAFVRHDPDGGAPLLAVSNLTPQ
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
PHHDYHVGVPRAGLWREILNTDSAHYGGSNLGNSGRLATEPVGMHGHAQRLRLTLPPLAT
CCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEE
IYLQAEK
EEEEECC
>Mature Secondary Structure 
TTEGISEMSQTLQALADGLPADAFAVLGPKLLADGRRQVRVLAPGAEAMGLIDPRGKLL
CCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHCCCCEEEEECCCCHHCCCCCCHHHHH
ARMQASAIDGVFEGTLAVDGPYRLRIVWPDRVQEVEDPYAFAATLDESLLLQIAAGDGQA
HHHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHCCCHHHHHHCCCEEEEEEECCCHHH
LRRALGAQHLHCGDVPGVRFALWAPHAQRVAVVGDFNGWDVRRHPMRQRIGGFWELFLPR
HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHC
VDAGARYKYAVTAADGRVLLKADPVARQTELPPATASVVPSAATFAWTDAAWMANRDPAA
CCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCEEEECCHHHCCCCCCCC
VPGPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWG
CCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
YQPLGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
ADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAE
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GEWVPNAHGGRENLEAVAFLRQLNRDIATQFPGVLTIAEESTAWPGVTAAISDGGLGFTH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCEEE
KWNMGWMHDTLGYMQRDPAERAHHHSQLTFGLVYAFDERFVLPLSHDEVVHGTGGLLGQM
ECCCCCHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCC
PGDDWRRFANLRAYLALMWAHPGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQ
CCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHCCHHH
LVGDLNAALRRTPALYRGTHRAEGFDWSVADDARNSVLAFVRHDPDGGAPLLAVSNLTPQ
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
PHHDYHVGVPRAGLWREILNTDSAHYGGSNLGNSGRLATEPVGMHGHAQRLRLTLPPLAT
CCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEE
IYLQAEK
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA