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The map label for this gene is glgB1 [H]

Identifier: 77748513

GI number: 77748513

Start: 192596

End: 194779

Strand: Direct

Name: glgB1 [H]

Synonym: XAC0156

Alternate gene names: 77748513

Gene position: 192596-194779 (Clockwise)

Preceding gene: 21240929

Following gene: 21240931

Centisome position: 3.72

GC content: 66.71

Gene sequence:

>2184_bases
ATGACAGCAGTGAGCAATCGATGGGATTCCGGCGTGGTACGCGCCCTGGCAGAGGCGCGCCACGGCGACGCGTTTGCGGT
CTTGGGTGCGCACCCGTCCGACAAGGGGCGCTTGTTGCGCACCTATCTACCCGGCGCCGACCGCGTCGGTGCGGTGCTCG
ACGATGGGCAGGTGGTGGCGCTGGACGCCGGCCCGGAGCCGGGCCTGTTTGCCGGCGAGTTGCCGGCGCACGGCGGGTAT
CGCCTGCGCATCGGCTGGCCCGGTGGCGAGCAGGAGACCGCAGACCCGTATGCGTTCGGCCCGCAGCTCAGCGACTTCGA
CCTGCACCTGATCAGCGAAGGCCACCATCTGCAGCTGGCCGACGCGCTGGGCGCCAACGTGGTCGAGGTGGAGGGCGTAC
GCGGCACGCGCTTTGCCGTCTGGGCACCGAATGCCTCGCGCGTGGCGGTGGTGGGCGACTTCAACAGCTGGGACGCGCGC
CGTCATCCGATGCGGCTGCGGCATCAGTCCGGCGTGTGGGAATTGTTCGTGCCCGACGTCGGCCCCGGCGCGCATTACAA
GTACCAGCTGCGTGGTCCGCACGGGCACGAGTTGCCGGCCAAGGCCGACCCGGTGGCGCGCCGCGCGGAGCTTGCGCCGG
GCACTGCGTCCATCGTGGCCGATCCCACGCCGCATCAGTGGAGCGACGACGGCTGGATGGCCACGCGTGCGCGTCGCCAG
GCCCACGACGCGCCGATGAGCATCTACGAGATCCACGCCGGCTCGTGGCTCCGCGAAGCAGGGGTTGACCTGGATTGGGA
TGGGCTGGCCGACCGCCTGATCCCGTACGTGGCCGACATGGGCTTCACCCATGTCGAGTTGATGCCGGTGAGCGAGCATC
CGTTCGGCGGCTCATGGGGTTATCAACCATTGGGTCTGTTCGCGCCCACTGCGCGCTTCGGCACGCCCGATGGATTTGCG
CGCTTTGTCGACCGCTGCCATCGCGAAGGCATCGGCGTGATCGTCGACTGGGTGCCGGCGCACTTTCCCACCGATGCGCA
CGGGCTGGCGCATTTCGACGGCACCGCGCTGTACGAGCATGCCGACCCGCGCGAAGGCTTCCACCGCGACTGGAATACGC
TGATCTACAACCACGGCCGCCGCGAGGTGTCCGGGTTCCTGATCGCCAGTGCGATGGAATTTCTGCAGCGCTATCACGTG
GACGGCCTTCGCGTGGATGCGGTGGCCTCGATGCTGTACCGCGATTACAGCCGCAACGCCGGCGAGTGGATACCCAACAT
CCACGGCGGGCGCGAGAACTACGAGACCATCGCATTCCTGCGCCGGCTCAACGAGGTGGTGCGCGAGCACACCCCGGGCG
CGGTAATGATTGCCGAAGAATCCACTGCGTTTCCCGGTGTCACCGCCGAGGTGGCGCACGGCGGCCTGGGCTTTCACTAC
AAGTGGAACATGGGCTGGATGCACGACACCCTGCATTACGCCGGGTTGGACCCGATCTATCGCCGCTACCATCATGGCGA
GCTGACTTTCAGCATGGTCTATGCGTATTCGGAGCGCTTCGTGCTGCCGATCTCGCACGACGAAGTGGTGCACGGCAAGG
GTTCGTTGCTGGGCCGCATGCCGGGCGACGATTGGCAACGCTTCGCCAACCTGCGCGCGTACTTGGGTTTCATGTTCACC
CACCCGGGACGCAAGTTGCTGTTCATGGGCTGCGAATTCGGCCAGCCGACCGAGTGGAATCACGACGCCGGCCTGCCGTG
GCATTTGCTCGACGACCCTCGCCATCGTGGGGTGCAGACGCTGGTGCGCGATTTGAACCGGCTGTATGTCCAATACCCGG
CGCTCCACGCACACGACGACGATCCGTCCGGGTTTGCCTGGGTGGTGGGCGACGATGCCGGCAACAGCGTGGTGGCGTTC
CTGCGCAAGGGCAAACGCGGCGACGCACCGGTGCTGGTGGTGATCAACTTCACCCCGGTCGTGCAACACGCATATCGCAT
CGGTGTGCCACAAGGCGGCCAGTGGCGCGAGGTGTTCAATAGCGACGCCGGCATCTACGGCGGCAGCAACCTGGGCAATG
GCGGCAGCGTCACCGCCGAGCAGCAATCCATGCATGGGCACGCGCAATCGCTGCCGCTGCTGTTGCCACCGCTGGGCGCC
ATCGTGCTGACGCCGTATGGCTGA

Upstream 100 bases:

>100_bases
CGGCCAATCGTCCAGGGTGGCTGATGGTGCCGATCGAAGGCTTGCGACGCATCCTGCAACGCGCACGCGCCGGTGCAGGA
GACACATGATGAGTGGAGTA

Downstream 100 bases:

>100_bases
TGCCCCCTGCGCCTCCCACCAGGCAACTGGCCCGGTGGGAGGCGGCAGCTGCGTCACGCATCCAGCTGTCGTTGACGGGG
TGGGTCATGCGCTGGCATCG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1; Glycogen-branching enzyme 1; BE 1 [H]

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTAVSNRWDSGVVRALAEARHGDAFAVLGAHPSDKGRLLRTYLPGADRVGAVLDDGQVVALDAGPEPGLFAGELPAHGGY
RLRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLADALGANVVEVEGVRGTRFAVWAPNASRVAVVGDFNSWDAR
RHPMRLRHQSGVWELFVPDVGPGAHYKYQLRGPHGHELPAKADPVARRAELAPGTASIVADPTPHQWSDDGWMATRARRQ
AHDAPMSIYEIHAGSWLREAGVDLDWDGLADRLIPYVADMGFTHVELMPVSEHPFGGSWGYQPLGLFAPTARFGTPDGFA
RFVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTALYEHADPREGFHRDWNTLIYNHGRREVSGFLIASAMEFLQRYHV
DGLRVDAVASMLYRDYSRNAGEWIPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTAEVAHGGLGFHY
KWNMGWMHDTLHYAGLDPIYRRYHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRMPGDDWQRFANLRAYLGFMFT
HPGRKLLFMGCEFGQPTEWNHDAGLPWHLLDDPRHRGVQTLVRDLNRLYVQYPALHAHDDDPSGFAWVVGDDAGNSVVAF
LRKGKRGDAPVLVVINFTPVVQHAYRIGVPQGGQWREVFNSDAGIYGGSNLGNGGSVTAEQQSMHGHAQSLPLLLPPLGA
IVLTPYG

Sequences:

>Translated_727_residues
MTAVSNRWDSGVVRALAEARHGDAFAVLGAHPSDKGRLLRTYLPGADRVGAVLDDGQVVALDAGPEPGLFAGELPAHGGY
RLRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLADALGANVVEVEGVRGTRFAVWAPNASRVAVVGDFNSWDAR
RHPMRLRHQSGVWELFVPDVGPGAHYKYQLRGPHGHELPAKADPVARRAELAPGTASIVADPTPHQWSDDGWMATRARRQ
AHDAPMSIYEIHAGSWLREAGVDLDWDGLADRLIPYVADMGFTHVELMPVSEHPFGGSWGYQPLGLFAPTARFGTPDGFA
RFVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTALYEHADPREGFHRDWNTLIYNHGRREVSGFLIASAMEFLQRYHV
DGLRVDAVASMLYRDYSRNAGEWIPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTAEVAHGGLGFHY
KWNMGWMHDTLHYAGLDPIYRRYHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRMPGDDWQRFANLRAYLGFMFT
HPGRKLLFMGCEFGQPTEWNHDAGLPWHLLDDPRHRGVQTLVRDLNRLYVQYPALHAHDDDPSGFAWVVGDDAGNSVVAF
LRKGKRGDAPVLVVINFTPVVQHAYRIGVPQGGQWREVFNSDAGIYGGSNLGNGGSVTAEQQSMHGHAQSLPLLLPPLGA
IVLTPYG
>Mature_726_residues
TAVSNRWDSGVVRALAEARHGDAFAVLGAHPSDKGRLLRTYLPGADRVGAVLDDGQVVALDAGPEPGLFAGELPAHGGYR
LRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLADALGANVVEVEGVRGTRFAVWAPNASRVAVVGDFNSWDARR
HPMRLRHQSGVWELFVPDVGPGAHYKYQLRGPHGHELPAKADPVARRAELAPGTASIVADPTPHQWSDDGWMATRARRQA
HDAPMSIYEIHAGSWLREAGVDLDWDGLADRLIPYVADMGFTHVELMPVSEHPFGGSWGYQPLGLFAPTARFGTPDGFAR
FVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTALYEHADPREGFHRDWNTLIYNHGRREVSGFLIASAMEFLQRYHVD
GLRVDAVASMLYRDYSRNAGEWIPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTAEVAHGGLGFHYK
WNMGWMHDTLHYAGLDPIYRRYHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRMPGDDWQRFANLRAYLGFMFTH
PGRKLLFMGCEFGQPTEWNHDAGLPWHLLDDPRHRGVQTLVRDLNRLYVQYPALHAHDDDPSGFAWVVGDDAGNSVVAFL
RKGKRGDAPVLVVINFTPVVQHAYRIGVPQGGQWREVFNSDAGIYGGSNLGNGGSVTAEQQSMHGHAQSLPLLLPPLGAI
VLTPYG

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=640, Percent_Identity=27.65625, Blast_Score=198, Evalue=1e-50,
Organism=Escherichia coli, GI1789839, Length=732, Percent_Identity=53.4153005464481, Blast_Score=768, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=651, Percent_Identity=26.1136712749616, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI32564391, Length=619, Percent_Identity=25.2019386106624, Blast_Score=154, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320826, Length=651, Percent_Identity=25.1920122887865, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573410, Length=614, Percent_Identity=27.5244299674267, Blast_Score=183, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 80373; Mature: 80242

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVSNRWDSGVVRALAEARHGDAFAVLGAHPSDKGRLLRTYLPGADRVGAVLDDGQVVA
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEECCCEEEE
LDAGPEPGLFAGELPAHGGYRLRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLA
EECCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEH
DALGANVVEVEGVRGTRFAVWAPNASRVAVVGDFNSWDARRHPMRLRHQSGVWELFVPDV
HHHCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCCC
GPGAHYKYQLRGPHGHELPAKADPVARRAELAPGTASIVADPTPHQWSDDGWMATRARRQ
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AHDAPMSIYEIHAGSWLREAGVDLDWDGLADRLIPYVADMGFTHVELMPVSEHPFGGSWG
HCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
YQPLGLFAPTARFGTPDGFARFVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTALYEH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCEEECC
ADPREGFHRDWNTLIYNHGRREVSGFLIASAMEFLQRYHVDGLRVDAVASMLYRDYSRNA
CCCCCCHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCC
GEWIPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTAEVAHGGLGFHY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCEEE
KWNMGWMHDTLHYAGLDPIYRRYHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRM
EECCCCHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCEEEEECCCCEEECCCCEEECC
PGDDWQRFANLRAYLGFMFTHPGRKLLFMGCEFGQPTEWNHDAGLPWHLLDDPRHRGVQT
CCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHH
LVRDLNRLYVQYPALHAHDDDPSGFAWVVGDDAGNSVVAFLRKGKRGDAPVLVVINFTPV
HHHHHHHHEEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCHH
VQHAYRIGVPQGGQWREVFNSDAGIYGGSNLGNGGSVTAEQQSMHGHAQSLPLLLPPLGA
HHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHCCHHHCCCEEECCCCE
IVLTPYG
EEEECCC
>Mature Secondary Structure 
TAVSNRWDSGVVRALAEARHGDAFAVLGAHPSDKGRLLRTYLPGADRVGAVLDDGQVVA
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEECCCEEEE
LDAGPEPGLFAGELPAHGGYRLRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLA
EECCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEH
DALGANVVEVEGVRGTRFAVWAPNASRVAVVGDFNSWDARRHPMRLRHQSGVWELFVPDV
HHHCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEECCCC
GPGAHYKYQLRGPHGHELPAKADPVARRAELAPGTASIVADPTPHQWSDDGWMATRARRQ
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AHDAPMSIYEIHAGSWLREAGVDLDWDGLADRLIPYVADMGFTHVELMPVSEHPFGGSWG
HCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
YQPLGLFAPTARFGTPDGFARFVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTALYEH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCEEECC
ADPREGFHRDWNTLIYNHGRREVSGFLIASAMEFLQRYHVDGLRVDAVASMLYRDYSRNA
CCCCCCHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCC
GEWIPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTAEVAHGGLGFHY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCEEE
KWNMGWMHDTLHYAGLDPIYRRYHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRM
EECCCCHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCEEEEECCCCEEECCCCEEECC
PGDDWQRFANLRAYLGFMFTHPGRKLLFMGCEFGQPTEWNHDAGLPWHLLDDPRHRGVQT
CCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHH
LVRDLNRLYVQYPALHAHDDDPSGFAWVVGDDAGNSVVAFLRKGKRGDAPVLVVINFTPV
HHHHHHHHEEECCCEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCHH
VQHAYRIGVPQGGQWREVFNSDAGIYGGSNLGNGGSVTAEQQSMHGHAQSLPLLLPPLGA
HHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHCCHHHCCCEEECCCCE
IVLTPYG
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA