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The map label for this gene is yfgC [C]

Identifier: 77747721

GI number: 77747721

Start: 2317874

End: 2319502

Strand: Reverse

Name: yfgC [C]

Synonym: PD1971

Alternate gene names: 77747721

Gene position: 2319502-2317874 (Counterclockwise)

Preceding gene: 28199840

Following gene: 28199836

Centisome position: 92.05

GC content: 54.27

Gene sequence:

>1629_bases
TTGCGCCGACTATCACTTGCTATTGCCACTGCTCTCGTATTGCCTCTGGGTGGTATTGGTGTCAATGCTCAGGAAAGCCG
CTTACCTGACATTGGTTCCTCGGCGGGGCAATTACTGACTCCGGCACGTCAGGCCGAATATGGCAAGTTGATGATGGCTG
AGTTACGTAACTACGGCTATGTGTTGGAAGACCCGTTACTACAGGGGTGGTTGCAGAGCATAGGAGAACATTTGGCGGCT
AACAGTGATCAACCGCACCAACTATTTACCTTTGTATTGTTAAAAGAACGTCAAATTAATGCGTTTGCCACATTGGGCGG
TTATGTAGCGGTGAATTCCGGCCTGTTGCTGACCGCTGAGCGTGAGGATGAGGTTGCAGCCGTGCTCTCCCACGAGATCG
CGCACATTACTCAGAAGCATGTGCTGCGTAGCGTTGAGCGTGCACAGCGTGATCAGATTCCGATTCTGCTAGGGATGCTG
GCGGCTGTGATCGCCGCACAGCACGTTGGCGGTAATTCAAGTGGTGATGCGACGATGGCTGGTATTACCAGTGCCATGGG
ACTCATGCAGCAGCGCCAGATCAATTACACCCGTTCCAACGAAGCTGAAGCAGATCGTCTTGGAATTCACACCTTGGCGC
GTAGTGGGTATGACTTAGAGGCGATGGCTGGCTTTTTCGAGAGAATGTCGCTGGTGACACGCGGTAATTCTGGCGGTGAT
CAGGCGCCGGACTATTTACAGACCCATCCTGTGACCGTGACCCGCATCAGCGAGGCGAAGGCACGTGCTGAGCAACTCAA
GAAACAAAAGGGACTCACGGGGGGCGAGGTTGACCTAATGTCCCGGGAGCGTTTGAATTTGCATCATGTTTTGCCTGGTG
TTCCTGCTAATCCGTTGTTGCCAAAAGTTCTACAGCCAGCGTATAGCGAGTTATCTCGTGGGCCTAGTGGTCAGTTCGGT
TGGGCCAAAGAGCGCTTACGCGTACTGAGTGCGAAATCCCCAGAGAGTGCGCTGCGTGAGTATGAAGCCCTGCGTCGCAA
CACAAAGGGGGGATTGAATGATTTTCAGCGCTATGGGATGGCGTTGGCCAAGTTCCGTAATGGCAGCAATCTGGACGAGG
TCATGCATGAATTCCGTACATTGCTTGAGGTACACCCTGACAATGTCTGGCTTGCTTCGGCATTGGCGCAGACCCAAGCG
CGGGCTGGACAGCGTCACGAGGCTGGTGAACGTTTCGATGCCTTGTTGCGGCGCTTGCCTGGGCAGCGTGCAGTGGTGCT
CATGTATGCGGAGATGCTTAACGAAGGCGGTAACCTTCAGGATGGTAAGCGTGCTCAGGCGTTGTTATTGCCGTTACTGC
GTCAGTTGTCTGAGGATGCGTTATTTCAACAAACTTTCGCGCGCTCCTGCGAGTTGGCCGGTGCCACTGCACGCGCCAGT
GAGGCCTATGCGGAAGCCGCGTTTCTGAACGGACGTCCGGAGCAGGCATTGATTCAGTTGCAGGCGTTGAAGAAGAAGAA
TCTGGATTATGTGACACGTGCGCGAGTGGATGCGCGTATTGCGGCGATTACTCCAGCGGTGCTGGAAATGCGTCGTCAGG
GTATCCGCGATCCGGATTTGGATCGATGA

Upstream 100 bases:

>100_bases
GGTAACCGATGCCCCGCATGTCGAAGGTGGCGGTTGCAACATTTAAACTGGTGACCTCCCCCTGGTGACCTCCCCAGAAT
TTCGCGACAGGAGCTTCACT

Downstream 100 bases:

>100_bases
TCTCTGTGTGTCATATCAGCCATATTTTTGTCATGAATTTGTAGTTTACTGGCGAACATCCTAAGTAAGGCGGTGTCTGA
GCGTGCAAAAACGCGTCTTG

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQGWLQSIGEHLAA
NSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGML
AAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERMSLVTRGNSGGD
QAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAYSELSRGPSGQFG
WAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQA
RAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARSCELAGATARAS
EAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR

Sequences:

>Translated_542_residues
MRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQGWLQSIGEHLAA
NSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGML
AAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERMSLVTRGNSGGD
QAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAYSELSRGPSGQFG
WAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQA
RAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARSCELAGATARAS
EAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR
>Mature_542_residues
MRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQGWLQSIGEHLAA
NSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGML
AAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERMSLVTRGNSGGD
QAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAYSELSRGPSGQFG
WAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQA
RAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARSCELAGATARAS
EAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=240, Percent_Identity=35.4166666666667, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 59508; Mature: 59508

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGY
CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VLEDPLLQGWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAE
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEC
REDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGMLAAVIAAQHVGGNSSGDATMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
GITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERMSLVTRGNSGGD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
QAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLL
CCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHCCCCCCCCCH
PKVLQPAYSELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGM
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQARAGQRHEAGERFDALLRRLP
HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARSCELAGATARAS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDL
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DR
CC
>Mature Secondary Structure
MRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGY
CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VLEDPLLQGWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAE
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEC
REDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGMLAAVIAAQHVGGNSSGDATMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
GITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERMSLVTRGNSGGD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
QAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLL
CCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHCCCCCCCCCH
PKVLQPAYSELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGM
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQARAGQRHEAGERFDALLRRLP
HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARSCELAGATARAS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDL
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]