| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is gumK
Identifier: 77747692
GI number: 77747692
Start: 1610719
End: 1611852
Strand: Reverse
Name: gumK
Synonym: PD1388
Alternate gene names: NA
Gene position: 1611852-1610719 (Counterclockwise)
Preceding gene: 28199273
Following gene: 28199271
Centisome position: 63.97
GC content: 45.15
Gene sequence:
>1134_bases ATGTCCGTTGGAGTGCGTCCCAATTATCTTGTTTTGTCAGCGCATGATTATCGTACACCACGTCGTGCCAGTATTCATTT CATTACGGATGAATTGGCTAAGCGTGGTGATACTCGTTTTTTCTCATTACGTTACAGTTTGTTGTCCAGGCTAAAAAAAG ATTTGCGTGTCCCGTTGGATGAGTATGCTAATCATGTGGTTGAGTATAATGGTGTGCATTGTTATCTATGGCGTACGTTG GTACATCCGTTTAATACACGTAGATCATGGTTGCGTGGTATTGAGGATATGCTCTTTCGCTGGTATGTGCAGCATCCACC GGAGATTTTATTGCAGTGGATACGCGAAGCAGACATCATTTTGTTCGAGAGTGGTACTGCAGTTGCGTTCATTGATATGG CGAAGCGTATTAATCCATCTGCCCGTCTTATTTATAATGCTTCAGACAGTCTCAGTGCGATTAATGTAGCATCTTATATC GAGCGTGAATTTCAGCGGGTTGCTCCAAGTTTGGATGTGATCGCTGTTGTTTCTCCTGCGATGGCTAAAGAAATTCCTAG TCATGGCAATGTGTTTTATATCGGCCATGGGGTTCTTCAAAATTTGAGTGAGCTTGGTGGTCCATCGCCATATGAGGGTG GGATCCATGCCGTATCGGTTGGTTCGATGTTGTTTGATCCGTTATTTTTTGTGGTTGCAGGGAAGGAGTTTCCACATATT ACTTTTCATGTAATTGGTTCAGGGATGGGGCGACATCCTGATTATCCTGATAATGTCGTGGTTTACGGTGAGATGAAGTA CGTTGAAACTATTCGTTATATTAGGCATGCATCTTTCGGTATTGCGCCGTATGTGTCACAGCAGGTTCCAGAATATTTAG CCGATAGTTCGATGAAACTGTTGCAGTACGACTTTTTCGGGTTACCGGCGGTGTGTCCGCATGCGGTGGTCGGCTCTTAT CCGACACGCTTTGGTTATACTCCAGGGAATGCTATTGAGTTGGTGGCTGCGATCAAGCGTGCGTTGCAAGCGCCGCATCA GCAGTCTCGTCAATATTTGAGTTGGGAAGAGGTTGTTGCTCGTGTTTTGGATCCTACTGCCTATGAGGGAACCAAGATAT TACCTGCGGTGTGA
Upstream 100 bases:
>100_bases TTTTGAAAATTAATGGAATACGTTAATTCAGTGAATAACGAGCGAGCTTATGAATGCTTCTACAAGTGCGGTATTAAGCC ACGATGCAAATGTTTCTACG
Downstream 100 bases:
>100_bases GCGTATCTGTATCCGTAGCTTTATTTTTCATTATTGGTGGTGAAGGAGCGAAAGTTGATGCATAACTTTGGTGTCTCTAT AGAAGGTGTGAGGTGTGTTT
Product: GumK protein
Products: NA
Alternate protein names: UDP-GlcA Beta-Glucuronosyltransferase; GumK-Related Protein; Glucuronyl Transferase; Glucuronosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumK
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYANHVVEYNGVHCYLWRTL VHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYI EREFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSMLFDPLFFVVAGKEFPHI TFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQYDFFGLPAVCPHAVVGSY PTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV
Sequences:
>Translated_377_residues MSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYANHVVEYNGVHCYLWRTL VHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYI EREFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSMLFDPLFFVVAGKEFPHI TFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQYDFFGLPAVCPHAVVGSY PTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV >Mature_376_residues SVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYANHVVEYNGVHCYLWRTLV HPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYIE REFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSMLFDPLFFVVAGKEFPHIT FHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQYDFFGLPAVCPHAVVGSYP TRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42603; Mature: 42472
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLD CCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHH EYANHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADII HHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEE LFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYIEREFQRVAPSLDVIAVVSPA EEECCCEEEEEHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCHH MAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSMLFDPLFFVVAGKEFPHI HHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCE TFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKL EEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH LQYDFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVA HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH RVLDPTAYEGTKILPAV HHHCCCCCCCCCCCCCC >Mature Secondary Structure SVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLD CCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHH EYANHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADII HHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEE LFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYIEREFQRVAPSLDVIAVVSPA EEECCCEEEEEHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCHH MAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSMLFDPLFFVVAGKEFPHI HHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCE TFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKL EEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH LQYDFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVA HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH RVLDPTAYEGTKILPAV HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA