Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 77747674

Identifier: 77747674

GI number: 77747674

Start: 1168479

End: 1170368

Strand: Reverse

Name: 77747674

Synonym: PD0969

Alternate gene names: NA

Gene position: 1170368-1168479 (Counterclockwise)

Preceding gene: 28198869

Following gene: 28198865

Centisome position: 46.45

GC content: 62.38

Gene sequence:

>1890_bases
ATGATTCTCGACGAATTCCTGATCCGCCTTGGCGCGGTCGCTGACACCTCAGGCTTCAACACCTTTAGCACCGGCCTGAC
CCGCGTTACGGGCCTCGTGACGGTGGCCGCCGCCGCCATGGGCGGGGCGCTGGCGGGAATGAATCGCTTTGTCGGCAGCG
CCTTAAGCGAACTCAATGCCCTCAACAGTGCCAGCCAGCGCACCGGAGCCAGCCTGTCCTTGCTCCAGGAGCTGGGCTAT
GCGGCGCGTTTGAATGGCTCCTCTGTGGAGGCCTCGACCCGTTCTATTGAATCCTTGTCCCAAAAAATAGGCGAAGCCGC
CAATGGAGTGGGGCGCGGGGCCATGCTGTTCCAAAAGCTGGGCTTGCAGGCCCGACAGGCCGATGGCTCCGTTAAATCCG
TTGGCGACATGCTGGGCGATGTGCAAGAAAAAATCCGTGGCTTGTCGGCACCACAACAGCAGTCCATCCTGGCCAACCTG
GGCATGGATGCCACGATGCTGCAAACCCTGCGCCTGAGTCGTGAGGAGTTAAACGGCGTCTTCCAAGAGGCACACGATCT
AGGCGTCATCACCGCGGATGGTGCCGATACCGCGCTGGAGTATGGCGATGCGATGGAACGCCTGCGCGTGGTGCTGGGGG
CGTTACGGACCAACATCGCCATTGGGGTGGCCCCGGCCTTCACCCGGCTGATTGAGCACTCCAAACACTGGTTGATCGCC
AATAAAGAGCAACTGCGTGATGGCATCGGCAAAGTCGTCAAGATCCTCATTGCAGCGGGCACCGCCGTATGGAACGTCAT
CCGTGCCGTGAACAGCGCGGTGAATCAGACCATTGGCTGGAAAGCGGTGCTGCTGGCCGTGGGCGCGGTGCTGGCCCGGG
CCTTTGCACTGAACCCGGTCACCTGGCTGATTGCGGGGATTGTGGCCCTAGTGGCGTTGGTCGATGACTTCATAACCTAC
CTGGACGGCGGAGAGTCCTTGCTGGGGGCCTTCTGGGGTCCGCTGATCACCTATGCCAAGCGCGCCAAGGCTGTGATTGC
AGACCTCACGCCCGCACTGAAAGCCCTTGGCGTCCTCTTAGCGGGACTGGCCATCGGTCACGTGGTGAGCAACATCGGCC
GCCTAGTGGGCGCAGGCCGCACTCTGGCAATGTGGCTGGCTGGGCCGTTGGTGAAAGCGCTCCAGGTCGCCGCGCTGGCG
TTGCGTGCCGCCTTCCTCTCCAACCCCATTGGATTAGTGATTGCAAGCGTGGCCCTGCTGGCGTATGCGATCTATACGCA
TTTTGACAAGATCAAGCACGCGGTGGGGACGGCCTGGCAGTGGTGCACCCGTACCGCCAATGCTGCCTTTGGGTCCATCC
AACACACGCTGCAAGAGGCTGCCGCCGCCGCCAAGACCACCTGGGCCAGCATCAAGGACGCCTGTGCGCTGGCCTTTAGC
CACAGCATCGCCACCGCCGATAGTGCCGTAAACCGCTTGCGGGCCGTGTTCAGCGCCATGGGCAGCAGTATCAGCACCGC
CCTGACCAGCGCCTTCGACACCATCATGACGCTATGGGACCGTACCGTCGGGCGTATCGCCCAGGGGGCCGAGCGGATCA
AAGGCTTTTTCCGAGCGATTGCTCCAACACTGAAGCAGGCCGGTCGTGACACCCAAGACGTGGCGCAGCGCGTCAATGCA
CAGGTGCAGGCCGCCCAGACGACAGCTCGCCACGCCGCTGCTCAGGCCGCCACGCCCGCCCGTTCCCAGGCCAATGTGCA
TTCCCAACAGGAAGTAAAGATCGATATCCACACCGCCGACCCGATCTTGGCCGGTCGTCAAGCCGCCGCCGACATCAACA
GACACCACCAAATGGCGCTGCGCAATACCGGTAGTGCTGTGGCGTTTTGA

Upstream 100 bases:

>100_bases
GAACAACTGCGCACCGTGTACTGCCTCAGTGACTTATGTACCTTCCACACCGCGATGGTGGAATGGGATGCCCTCCAGCA
TGACGCGCTAACCCCCTGCG

Downstream 100 bases:

>100_bases
TCCGCCCAGCCTATCGGTAAATCTCACCCCGGTGACCAACACGTTCTGTTTTTGATTTTTATGCCGCTTCTAATTTCACA
TGAACGCGCCGTCCGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Lytic Transglycosylase Catalytic; Tail Tape Measure Core Region

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY
AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL
GMDATMLQTLRLSREELNGVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA
NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAVLLAVGAVLARAFALNPVTWLIAGIVALVALVDDFITY
LDGGESLLGAFWGPLITYAKRAKAVIADLTPALKALGVLLAGLAIGHVVSNIGRLVGAGRTLAMWLAGPLVKALQVAALA
LRAAFLSNPIGLVIASVALLAYAIYTHFDKIKHAVGTAWQWCTRTANAAFGSIQHTLQEAAAAAKTTWASIKDACALAFS
HSIATADSAVNRLRAVFSAMGSSISTALTSAFDTIMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA
QVQAAQTTARHAAAQAATPARSQANVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF

Sequences:

>Translated_629_residues
MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY
AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL
GMDATMLQTLRLSREELNGVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA
NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAVLLAVGAVLARAFALNPVTWLIAGIVALVALVDDFITY
LDGGESLLGAFWGPLITYAKRAKAVIADLTPALKALGVLLAGLAIGHVVSNIGRLVGAGRTLAMWLAGPLVKALQVAALA
LRAAFLSNPIGLVIASVALLAYAIYTHFDKIKHAVGTAWQWCTRTANAAFGSIQHTLQEAAAAAKTTWASIKDACALAFS
HSIATADSAVNRLRAVFSAMGSSISTALTSAFDTIMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA
QVQAAQTTARHAAAQAATPARSQANVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF
>Mature_629_residues
MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNALNSASQRTGASLSLLQELGY
AARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKLGLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANL
GMDATMLQTLRLSREELNGVFQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA
NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAVLLAVGAVLARAFALNPVTWLIAGIVALVALVDDFITY
LDGGESLLGAFWGPLITYAKRAKAVIADLTPALKALGVLLAGLAIGHVVSNIGRLVGAGRTLAMWLAGPLVKALQVAALA
LRAAFLSNPIGLVIASVALLAYAIYTHFDKIKHAVGTAWQWCTRTANAAFGSIQHTLQEAAAAAKTTWASIKDACALAFS
HSIATADSAVNRLRAVFSAMGSSISTALTSAFDTIMTLWDRTVGRIAQGAERIKGFFRAIAPTLKQAGRDTQDVAQRVNA
QVQAAQTTARHAAAQAATPARSQANVHSQQEVKIDIHTADPILAGRQAAADINRHHQMALRNTGSAVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65877; Mature: 65877

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNA
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSASQRTGASLSLLQELGYAARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKL
HHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANLGMDATMLQTLRLSREELNGV
CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAVLLAVGAVLARAFALNPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHH
TWLIAGIVALVALVDDFITYLDGGESLLGAFWGPLITYAKRAKAVIADLTPALKALGVLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAIGHVVSNIGRLVGAGRTLAMWLAGPLVKALQVAALALRAAFLSNPIGLVIASVALL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AYAIYTHFDKIKHAVGTAWQWCTRTANAAFGSIQHTLQEAAAAAKTTWASIKDACALAFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSIATADSAVNRLRAVFSAMGSSISTALTSAFDTIMTLWDRTVGRIAQGAERIKGFFRAI
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APTLKQAGRDTQDVAQRVNAQVQAAQTTARHAAAQAATPARSQANVHSQQEVKIDIHTAD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEECC
PILAGRQAAADINRHHQMALRNTGSAVAF
CHHHCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MILDEFLIRLGAVADTSGFNTFSTGLTRVTGLVTVAAAAMGGALAGMNRFVGSALSELNA
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSASQRTGASLSLLQELGYAARLNGSSVEASTRSIESLSQKIGEAANGVGRGAMLFQKL
HHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GLQARQADGSVKSVGDMLGDVQEKIRGLSAPQQQSILANLGMDATMLQTLRLSREELNGV
CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FQEAHDLGVITADGADTALEYGDAMERLRVVLGALRTNIAIGVAPAFTRLIEHSKHWLIA
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NKEQLRDGIGKVVKILIAAGTAVWNVIRAVNSAVNQTIGWKAVLLAVGAVLARAFALNPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHH
TWLIAGIVALVALVDDFITYLDGGESLLGAFWGPLITYAKRAKAVIADLTPALKALGVLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAIGHVVSNIGRLVGAGRTLAMWLAGPLVKALQVAALALRAAFLSNPIGLVIASVALL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AYAIYTHFDKIKHAVGTAWQWCTRTANAAFGSIQHTLQEAAAAAKTTWASIKDACALAFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSIATADSAVNRLRAVFSAMGSSISTALTSAFDTIMTLWDRTVGRIAQGAERIKGFFRAI
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APTLKQAGRDTQDVAQRVNAQVQAAQTTARHAAAQAATPARSQANVHSQQEVKIDIHTAD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEECC
PILAGRQAAADINRHHQMALRNTGSAVAF
CHHHCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA