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The map label for this gene is deoC [H]

Identifier: 77465744

GI number: 77465744

Start: 864363

End: 865337

Strand: Direct

Name: deoC [H]

Synonym: RSP_3739

Alternate gene names: 77465744

Gene position: 864363-865337 (Clockwise)

Preceding gene: 77465743

Following gene: 77465745

Centisome position: 91.66

GC content: 70.56

Gene sequence:

>975_bases
ATGAAGGCCCACGCCATGCCCGACAGCCACCCCCGCAACCCCGGCACGCCCTTCGCCCCCGACTGGTTCGAGGAGATGCA
GGTGAACCGCACCGCGGCCGAGCGCCGCGCGACCACGATCTCGGGCAGCCGCTCGGTCAAGAAGGATCATCAGGCCGCCT
GGCTCCTGCGCGCGATCCAGTGCATCGACCTGACCACCCTGTCGGGCGACGACACGCCGGGCAAGGTGCGCCGTCTCTGC
GCCAAGGCGCGCCAGCCCGTGCGGCCGGACCTCCTGGAGGCGATGGGCGTGGGCGACATCGGCCTGACCACGGGGGCAGT
CTGCGTCTATCCGACGATGGTGCCCCATGCGGTCGCGGCCCTTCAGGGCTCGGGCATTCCGGTGGCCTCGGTCGCCACGG
GCTTTCCCGCCGGCCTGACGCCGCTGTCGCAGCGGCTGGCCGAGATCACCTATGCCGTCGAGGCGGGCGCCTCCGAGATC
GACATCGTCATCACCCGCGAACATGTTCTGCTGGGCAACTGGCAGGCGCTCTACGACGAGGTCGCGGCCATGCGGGCCGC
CTGCGGCGAGGCGCACATGAAGGCGATCCTCGCCACGGGCGAGCTCGGCACGCTGACGAACGTCTACCGCGCCTCGATGG
TCGCGATGCAGGCGGGGTCCGACTTCATCAAGACCTCGACCGGCAAGGAGACCGAGAATGCCACCCTGCCCGTCTCGCTC
ACCATGCTGCGGGCGCTGAGGGACTATGGCGAGCGGACGGGCTATCGGATCGGCTTCAAGCCCGCCGGGGGCCTGCGCGC
GGCCAAGGACGCGCTGGCTTGGCTCGCGCTGATGAAGGAGGAGCTGGGCCAGCCGTGGCTCAGGCCCGACCTCTTCCGCA
TCGGCGCCTCGACGCTGCTCGGCGACATCGAGCGGCAACTCGAGCACCACGTCACGGGGCGCTATGCCAGCGCCGACCAC
CACGCCCTGAGCTGA

Upstream 100 bases:

>100_bases
CGCGCTATGCCGCCCATTCCGTGACGGGGCGCGGCACCCAGAAATCCTACGCCACGCCGGAGGCCTTCGAGGCCTTCTGC
CGCGCGCTCCCCCCATCCGC

Downstream 100 bases:

>100_bases
AGGCCTGAGACATGAGCATCAAGGACATCATGGAAAGCATGGATTACGGCCCTGCGCCCGAGGCCGCGACGGATGCGAAG
GCCTGGCTGGCGGCGCGCGG

Product: deoxyribose phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKAHAMPDSHPRNPGTPFAPDWFEEMQVNRTAAERRATTISGSRSVKKDHQAAWLLRAIQCIDLTTLSGDDTPGKVRRLC
AKARQPVRPDLLEAMGVGDIGLTTGAVCVYPTMVPHAVAALQGSGIPVASVATGFPAGLTPLSQRLAEITYAVEAGASEI
DIVITREHVLLGNWQALYDEVAAMRAACGEAHMKAILATGELGTLTNVYRASMVAMQAGSDFIKTSTGKETENATLPVSL
TMLRALRDYGERTGYRIGFKPAGGLRAAKDALAWLALMKEELGQPWLRPDLFRIGASTLLGDIERQLEHHVTGRYASADH
HALS

Sequences:

>Translated_324_residues
MKAHAMPDSHPRNPGTPFAPDWFEEMQVNRTAAERRATTISGSRSVKKDHQAAWLLRAIQCIDLTTLSGDDTPGKVRRLC
AKARQPVRPDLLEAMGVGDIGLTTGAVCVYPTMVPHAVAALQGSGIPVASVATGFPAGLTPLSQRLAEITYAVEAGASEI
DIVITREHVLLGNWQALYDEVAAMRAACGEAHMKAILATGELGTLTNVYRASMVAMQAGSDFIKTSTGKETENATLPVSL
TMLRALRDYGERTGYRIGFKPAGGLRAAKDALAWLALMKEELGQPWLRPDLFRIGASTLLGDIERQLEHHVTGRYASADH
HALS
>Mature_324_residues
MKAHAMPDSHPRNPGTPFAPDWFEEMQVNRTAAERRATTISGSRSVKKDHQAAWLLRAIQCIDLTTLSGDDTPGKVRRLC
AKARQPVRPDLLEAMGVGDIGLTTGAVCVYPTMVPHAVAALQGSGIPVASVATGFPAGLTPLSQRLAEITYAVEAGASEI
DIVITREHVLLGNWQALYDEVAAMRAACGEAHMKAILATGELGTLTNVYRASMVAMQAGSDFIKTSTGKETENATLPVSL
TMLRALRDYGERTGYRIGFKPAGGLRAAKDALAWLALMKEELGQPWLRPDLFRIGASTLLGDIERQLEHHVTGRYASADH
HALS

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 2 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116063554, Length=307, Percent_Identity=65.4723127035831, Blast_Score=412, Evalue=1e-115,
Organism=Escherichia coli, GI1790841, Length=245, Percent_Identity=39.5918367346939, Blast_Score=150, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17533015, Length=253, Percent_Identity=49.0118577075099, Blast_Score=234, Evalue=5e-62,
Organism=Drosophila melanogaster, GI19922098, Length=308, Percent_Identity=49.025974025974, Blast_Score=285, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 34862; Mature: 34862

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHAMPDSHPRNPGTPFAPDWFEEMQVNRTAAERRATTISGSRSVKKDHQAAWLLRAIQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CIDLTTLSGDDTPGKVRRLCAKARQPVRPDLLEAMGVGDIGLTTGAVCVYPTMVPHAVAA
HHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH
LQGSGIPVASVATGFPAGLTPLSQRLAEITYAVEAGASEIDIVITREHVLLGNWQALYDE
HCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCHHHHHHH
VAAMRAACGEAHMKAILATGELGTLTNVYRASMVAMQAGSDFIKTSTGKETENATLPVSL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHH
TMLRALRDYGERTGYRIGFKPAGGLRAAKDALAWLALMKEELGQPWLRPDLFRIGASTLL
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GDIERQLEHHVTGRYASADHHALS
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKAHAMPDSHPRNPGTPFAPDWFEEMQVNRTAAERRATTISGSRSVKKDHQAAWLLRAIQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CIDLTTLSGDDTPGKVRRLCAKARQPVRPDLLEAMGVGDIGLTTGAVCVYPTMVPHAVAA
HHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH
LQGSGIPVASVATGFPAGLTPLSQRLAEITYAVEAGASEIDIVITREHVLLGNWQALYDE
HCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCHHHHHHH
VAAMRAACGEAHMKAILATGELGTLTNVYRASMVAMQAGSDFIKTSTGKETENATLPVSL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHH
TMLRALRDYGERTGYRIGFKPAGGLRAAKDALAWLALMKEELGQPWLRPDLFRIGASTLL
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GDIERQLEHHVTGRYASADHHALS
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA