Click here to switch to the map view.

The map label for this gene is phaF [H]

Identifier: 77465718

GI number: 77465718

Start: 832918

End: 833199

Strand: Reverse

Name: phaF [H]

Synonym: RSP_3711

Alternate gene names: 77465718

Gene position: 833199-832918 (Counterclockwise)

Preceding gene: 77465719

Following gene: 77465717

Centisome position: 88.35

GC content: 65.25

Gene sequence:

>282_bases
ATGAGCGCCACGATCCTCTCGGCCGCCCTGACCTATGCCCAGTTCCTGCTGGCCCTGGCCAGCTGTCTCGTCTGCTGGCG
TCTGCTGCACGGGCCGCGCGCGCAGGACAGGGTGCTGGCGCTCGACACGCTCTATGTGACCGCGATGCTCTTCTTCGTGG
TGGCGGGGATGCGGCTCGGGACGACCTTCTTCTTCGAAGTGTCGCTGGTGATCGGCGTGCTGGGCTTCGTGGCCACCGTC
TCGCTGGCGAAGTTCCTCATCCGGGGAGAGATCATCGAATGA

Upstream 100 bases:

>100_bases
CGGGAGTGCTGCTCATCCATGTCTTCGACATGGTGGACGAGGAGGAATGGATCCGCCTCATCCGCGACCGCTACGAGGCC
CTGCTGCTGGAGATCTTCGA

Downstream 100 bases:

>100_bases
CGCATCTCGAGACCGTCCCGCTCTGGCTCGCGCTTCCGATCGCGCTGTTTCTCGTCCTCGGCAGCACGCTGACGCTTCTT
GGCACGGTCGGGCTCGTGCA

Product: putative monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSATILSAALTYAQFLLALASCLVCWRLLHGPRAQDRVLALDTLYVTAMLFFVVAGMRLGTTFFFEVSLVIGVLGFVATV
SLAKFLIRGEIIE

Sequences:

>Translated_93_residues
MSATILSAALTYAQFLLALASCLVCWRLLHGPRAQDRVLALDTLYVTAMLFFVVAGMRLGTTFFFEVSLVIGVLGFVATV
SLAKFLIRGEIIE
>Mature_92_residues
SATILSAALTYAQFLLALASCLVCWRLLHGPRAQDRVLALDTLYVTAMLFFVVAGMRLGTTFFFEVSLVIGVLGFVATVS
LAKFLIRGEIIE

Specific function: Part of a K(+) efflux system involved in pH adaptation [H]

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 10144; Mature: 10013

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATILSAALTYAQFLLALASCLVCWRLLHGPRAQDRVLALDTLYVTAMLFFVVAGMRLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TTFFFEVSLVIGVLGFVATVSLAKFLIRGEIIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SATILSAALTYAQFLLALASCLVCWRLLHGPRAQDRVLALDTLYVTAMLFFVVAGMRLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TTFFFEVSLVIGVLGFVATVSLAKFLIRGEIIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]