| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465687
Identifier: 77465687
GI number: 77465687
Start: 800591
End: 801214
Strand: Reverse
Name: 77465687
Synonym: RSP_3680
Alternate gene names: NA
Gene position: 801214-800591 (Counterclockwise)
Preceding gene: 77465689
Following gene: 77465686
Centisome position: 84.96
GC content: 69.23
Gene sequence:
>624_bases ATGGAGGAACGGGATTCCGAGACGGGGTGGCGCGGGTCGCGCGAAGGCTGGCTTCAGGCGGCCTACGAGGCGCTGATCGA GGGCGGCGTGGAATCGGTCAAGATCATGACCCTCGCCGCGCGGCTGAAGCTCTCCCGCACCAGCTTCTACTGGTTCTTCA AGGACCGGGCCGACGTGCTGGATGCGCTGCGCAGCCAGTGGGCCGGGACGACGACCGCGCCCCTCGTGGCGGCCTCTGCC GAATATGCGGAGAGCCGGGCCGAAGCGATGCTGAATGTGCTGGCCTGCTTCCTCTCGGGTCGGTTCGATGCGCGCTTCGA ATTCGCGGCCCGCAGCTGGGGCCTGCAGGATCCCGCCATGGCTGCGGCCGTCGAGGCGGCGGATGCCGAGCGGCTGGCGG CGCTGACCGACATGCTCGCGCGGTGGGGGCACGATCCGCAGGAGGCGGATGTGCGGGCGCGGACCGTCTATCTGGTGCAG ATCGGCTATATCTCGATGCGGGCGGAGGAGACGCTGGAGACGCGGCTCGCGCGCATTCCGAACTATGTCGAGATCTACAC CGGCGTGCGCCCCGAGCCGCGCGAGATGGCGAGGTTCCGGGCGAGGCTGGGTCTTGCGGTCTGA
Upstream 100 bases:
>100_bases AATGTTCAGTTGTGTCAATTAAAGGTTCGGCAGTGACCAATGGATGATCTGTGGCGAACATTCGCTTGCCTGCCGGCTGT CGCCCGCCTAAGCACGGGAC
Downstream 100 bases:
>100_bases GCAGAGACGCCACCGACGGTCTGCCGGGGGACGATGCACGTTCAGGAAGCGCCCACTCCTCCTGTGCGGGTGACGAGTGC AACCCTGACGTGTGGCGGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFYWFFKDRADVLDALRSQWAGTTTAPLVAASA EYAESRAEAMLNVLACFLSGRFDARFEFAARSWGLQDPAMAAAVEAADAERLAALTDMLARWGHDPQEADVRARTVYLVQ IGYISMRAEETLETRLARIPNYVEIYTGVRPEPREMARFRARLGLAV
Sequences:
>Translated_207_residues MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFYWFFKDRADVLDALRSQWAGTTTAPLVAASA EYAESRAEAMLNVLACFLSGRFDARFEFAARSWGLQDPAMAAAVEAADAERLAALTDMLARWGHDPQEADVRARTVYLVQ IGYISMRAEETLETRLARIPNYVEIYTGVRPEPREMARFRARLGLAV >Mature_207_residues MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFYWFFKDRADVLDALRSQWAGTTTAPLVAASA EYAESRAEAMLNVLACFLSGRFDARFEFAARSWGLQDPAMAAAVEAADAERLAALTDMLARWGHDPQEADVRARTVYLVQ IGYISMRAEETLETRLARIPNYVEIYTGVRPEPREMARFRARLGLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23221; Mature: 23221
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFYWFFKDRADVL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH DALRSQWAGTTTAPLVAASAEYAESRAEAMLNVLACFLSGRFDARFEFAARSWGLQDPAM HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHH AAAVEAADAERLAALTDMLARWGHDPQEADVRARTVYLVQIGYISMRAEETLETRLARIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECHHHHHHHHHHHHHHHHCC NYVEIYTGVRPEPREMARFRARLGLAV CCEEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFYWFFKDRADVL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH DALRSQWAGTTTAPLVAASAEYAESRAEAMLNVLACFLSGRFDARFEFAARSWGLQDPAM HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHH AAAVEAADAERLAALTDMLARWGHDPQEADVRARTVYLVQIGYISMRAEETLETRLARIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEECHHHHHHHHHHHHHHHHCC NYVEIYTGVRPEPREMARFRARLGLAV CCEEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA