| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465595
Identifier: 77465595
GI number: 77465595
Start: 686736
End: 687272
Strand: Direct
Name: 77465595
Synonym: RSP_3594
Alternate gene names: NA
Gene position: 686736-687272 (Clockwise)
Preceding gene: 77465585
Following gene: 77465603
Centisome position: 72.82
GC content: 72.81
Gene sequence:
>537_bases ATGACCATCGACCTTCGCAAGACCGCCATCGCCGCGCTGGCCGCCCTCTCGCTGGTGCCCGCCGCCGCGGCGCCCGCCCA TGCGCTCGGCAAGAAGGACAAGGCCTTCATCGCCGGCGCCGCCACCGCGGCCGTTGCGGGCGTGGTGATGCAGAACATGC GCGCCAACGGCCAGTGGCCCTTCGGTCAGCAGCAGCCCCGCTATGCGGCCCCGCCGGCCCAGCCGCAATATTACGTCCAG CCGCGGGCGACCTATGCCACCACCGCCCCGCGTCAGGTCACCTACCAGCCCCGCTATGTGGCCCCGAGCGTCCATTCCAC GCCCGCAGCCCAGGCCTTCCGCGAGCTCTCGCCCCAGATGCGGCGCGAGGTGCAGATCTCGCTCGCGCGCTACGGCTATT ACTCGGGCTCCATCGACGGCGCCTGGGGGCCCGGCACCTCGGCCGCGGTCGATGCCTATGCCCGCGACAGCGGCCGCATC GGGCAGCTCGGCAGCGTCGCCGGCGCCTACGGCGTGATGGACAGCCTCGGGGGCTGA
Upstream 100 bases:
>100_bases GCAGCCCCGGGTTTTTGCCTGACACGCCGCTTCGACCCATGTTCCGGAGCAGCAGATACCACCGCCCCTGCCGACCGGGG CGCGAACAACGGAGACAGAG
Downstream 100 bases:
>100_bases ACCGGATTTCACGAAGCGCCTTTTCAGCAAGAGTTTCAGAACGACAGAAGCCCCGGCGATCCGCCGGGGCTTCATTTTGT CTGTCAGAGGCAATCCGCCC
Product: antifreeze protein, type I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTIDLRKTAIAALAALSLVPAAAAPAHALGKKDKAFIAGAATAAVAGVVMQNMRANGQWPFGQQQPRYAAPPAQPQYYVQ PRATYATTAPRQVTYQPRYVAPSVHSTPAAQAFRELSPQMRREVQISLARYGYYSGSIDGAWGPGTSAAVDAYARDSGRI GQLGSVAGAYGVMDSLGG
Sequences:
>Translated_178_residues MTIDLRKTAIAALAALSLVPAAAAPAHALGKKDKAFIAGAATAAVAGVVMQNMRANGQWPFGQQQPRYAAPPAQPQYYVQ PRATYATTAPRQVTYQPRYVAPSVHSTPAAQAFRELSPQMRREVQISLARYGYYSGSIDGAWGPGTSAAVDAYARDSGRI GQLGSVAGAYGVMDSLGG >Mature_177_residues TIDLRKTAIAALAALSLVPAAAAPAHALGKKDKAFIAGAATAAVAGVVMQNMRANGQWPFGQQQPRYAAPPAQPQYYVQP RATYATTAPRQVTYQPRYVAPSVHSTPAAQAFRELSPQMRREVQISLARYGYYSGSIDGAWGPGTSAAVDAYARDSGRIG QLGSVAGAYGVMDSLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18629; Mature: 18498
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDLRKTAIAALAALSLVPAAAAPAHALGKKDKAFIAGAATAAVAGVVMQNMRANGQWP CCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC FGQQQPRYAAPPAQPQYYVQPRATYATTAPRQVTYQPRYVAPSVHSTPAAQAFRELSPQM CCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEECCCCEECCCCCCCHHHHHHHHHCHHH RREVQISLARYGYYSGSIDGAWGPGTSAAVDAYARDSGRIGQLGSVAGAYGVMDSLGG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TIDLRKTAIAALAALSLVPAAAAPAHALGKKDKAFIAGAATAAVAGVVMQNMRANGQWP CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC FGQQQPRYAAPPAQPQYYVQPRATYATTAPRQVTYQPRYVAPSVHSTPAAQAFRELSPQM CCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEECCCCEECCCCCCCHHHHHHHHHCHHH RREVQISLARYGYYSGSIDGAWGPGTSAAVDAYARDSGRIGQLGSVAGAYGVMDSLGG HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA