| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465584
Identifier: 77465584
GI number: 77465584
Start: 676618
End: 677838
Strand: Reverse
Name: 77465584
Synonym: RSP_3583
Alternate gene names: NA
Gene position: 677838-676618 (Counterclockwise)
Preceding gene: 77465586
Following gene: 77465583
Centisome position: 71.88
GC content: 65.68
Gene sequence:
>1221_bases ATGTATGACTATGCCGTGCTCTGGGAATGGGTGATGATCGCCGCCCGCTGGACGCATGTCATCACGGCCATCGCCTGGAT CGGCTCGTCCTTCTATTTCATCGCGCTCGACCTCGGCCTGCGCAAGACGCCCTCGCTGCCGCCGCTCGCCCATGGCGAGG AGTGGCAGGTGCATGGCGGCGGCTTCTATCACATCAACAAATATCTCGTCGCGCCGGACTTCCTGCCCGAGCATCTGACC TGGTTCAAATGGGAAAGCTATGCGACCTGGCTCTCGGGCTTCGCCATGCTGGTGCTGCTCTACTATGTCGGGGCCGAGCT CTTTCTCATCGATCCCACGGTGATGGAACTGTCGGTCTGGCAGGCGGTGGCCCTGTCGCTCGCCTCGCTGGGCGGCGGCT GGCTGGTCTATGACGGGCTCTGCCGCTCGCCGGTGGGACGGCATCCGACGGCGCTGATGATCCTCCTGTTCGGCGTGCTG GTCGCGATGGCCTGGGGTTATACGCAGGTCTTCTCGGGACGGGCGGCGCTCCTGCATCTGGGGGCCTTCACCGCCACCAT CATGAGCGGGAATGTCTTCCTGACCATCATGCCGAACCAGCGGATCGTGGTGTCCGACCTCAAGGCCGGGCGGCGGCCGG ACCCGAAATACGGCGAGATCGCCAAGCAGCGCAGCACGCACAACAACTATCTGACGCTGCCGGTGATCTTCCTCATGCTG TCGAACCATTACCCGCTGATCTTCGCCACCGAGTTCAACTGGCTGATCGCCTCGCTGGTCTTCCTGATGGGGGTGACGAT TCGGCACTGGTTCAACTCCCGTCACGCGCGCAAAGGCAACCCGCACTGGACATGGGCGGCGACGGCGGTGATCTTCCTCG TGATCGCCTGGCTCTCGACCGCGCCGATGCGGGGCGTGCCGGAGGAGGCGGCGCTCGGCGGCAGGGCTGCGCGCTTCGCA GCCGCCGACGGATTCGCGGAAGTGACGGACATCGTGACGGGGCGCTGTTCGATGTGCCATGCGGCCGAGCCGGGCTGGGA CGGCCTTCACTGGCCGCCGAAGAACGTGCGGCTCGAGACGGCCGCGCAGATCGCCCACGAAGCGCGGCGGATCTATCTGC AGGCCGGGATCACCCATGCCATGCCGCCCGGCAACCTCAGCTACATGGAGCCCGAGGAGCGGGCCGCCATCGTGCGCTGG TATCGATCGGTGGCGGGCTGA
Upstream 100 bases:
>100_bases GAAGGCCGCGGCCGCCCCCGCCGGAGTGATTGCACTTTCCGCGCGATCCGGGAACAACGGGAGGACAGGCCGCAGGGGCC GCAGCCGGGGAGCTTCGCCG
Downstream 100 bases:
>100_bases CGGTTCGAGGACAGCCGTAGCGCGCCTGGATAAATCGGGTTCGGCTTAATCCGTCCTTAAACTGACTCGCGTCTTCTGGG GCGACCGGAAGAACGAGGTC
Product: class I monoheme cytochrome c
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MYDYAVLWEWVMIAARWTHVITAIAWIGSSFYFIALDLGLRKTPSLPPLAHGEEWQVHGGGFYHINKYLVAPDFLPEHLT WFKWESYATWLSGFAMLVLLYYVGAELFLIDPTVMELSVWQAVALSLASLGGGWLVYDGLCRSPVGRHPTALMILLFGVL VAMAWGYTQVFSGRAALLHLGAFTATIMSGNVFLTIMPNQRIVVSDLKAGRRPDPKYGEIAKQRSTHNNYLTLPVIFLML SNHYPLIFATEFNWLIASLVFLMGVTIRHWFNSRHARKGNPHWTWAATAVIFLVIAWLSTAPMRGVPEEAALGGRAARFA AADGFAEVTDIVTGRCSMCHAAEPGWDGLHWPPKNVRLETAAQIAHEARRIYLQAGITHAMPPGNLSYMEPEERAAIVRW YRSVAG
Sequences:
>Translated_406_residues MYDYAVLWEWVMIAARWTHVITAIAWIGSSFYFIALDLGLRKTPSLPPLAHGEEWQVHGGGFYHINKYLVAPDFLPEHLT WFKWESYATWLSGFAMLVLLYYVGAELFLIDPTVMELSVWQAVALSLASLGGGWLVYDGLCRSPVGRHPTALMILLFGVL VAMAWGYTQVFSGRAALLHLGAFTATIMSGNVFLTIMPNQRIVVSDLKAGRRPDPKYGEIAKQRSTHNNYLTLPVIFLML SNHYPLIFATEFNWLIASLVFLMGVTIRHWFNSRHARKGNPHWTWAATAVIFLVIAWLSTAPMRGVPEEAALGGRAARFA AADGFAEVTDIVTGRCSMCHAAEPGWDGLHWPPKNVRLETAAQIAHEARRIYLQAGITHAMPPGNLSYMEPEERAAIVRW YRSVAG >Mature_406_residues MYDYAVLWEWVMIAARWTHVITAIAWIGSSFYFIALDLGLRKTPSLPPLAHGEEWQVHGGGFYHINKYLVAPDFLPEHLT WFKWESYATWLSGFAMLVLLYYVGAELFLIDPTVMELSVWQAVALSLASLGGGWLVYDGLCRSPVGRHPTALMILLFGVL VAMAWGYTQVFSGRAALLHLGAFTATIMSGNVFLTIMPNQRIVVSDLKAGRRPDPKYGEIAKQRSTHNNYLTLPVIFLML SNHYPLIFATEFNWLIASLVFLMGVTIRHWFNSRHARKGNPHWTWAATAVIFLVIAWLSTAPMRGVPEEAALGGRAARFA AADGFAEVTDIVTGRCSMCHAAEPGWDGLHWPPKNVRLETAAQIAHEARRIYLQAGITHAMPPGNLSYMEPEERAAIVRW YRSVAG
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45444; Mature: 45444
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDYAVLWEWVMIAARWTHVITAIAWIGSSFYFIALDLGLRKTPSLPPLAHGEEWQVHGG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECC GFYHINKYLVAPDFLPEHLTWFKWESYATWLSGFAMLVLLYYVGAELFLIDPTVMELSVW EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH QAVALSLASLGGGWLVYDGLCRSPVGRHPTALMILLFGVLVAMAWGYTQVFSGRAALLHL HHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHH GAFTATIMSGNVFLTIMPNQRIVVSDLKAGRRPDPKYGEIAKQRSTHNNYLTLPVIFLML HHHHHHEECCCEEEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHH SNHYPLIFATEFNWLIASLVFLMGVTIRHWFNSRHARKGNPHWTWAATAVIFLVIAWLST CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC APMRGVPEEAALGGRAARFAAADGFAEVTDIVTGRCSMCHAAEPGWDGLHWPPKNVRLET CCCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH AAQIAHEARRIYLQAGITHAMPPGNLSYMEPEERAAIVRWYRSVAG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MYDYAVLWEWVMIAARWTHVITAIAWIGSSFYFIALDLGLRKTPSLPPLAHGEEWQVHGG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECC GFYHINKYLVAPDFLPEHLTWFKWESYATWLSGFAMLVLLYYVGAELFLIDPTVMELSVW EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH QAVALSLASLGGGWLVYDGLCRSPVGRHPTALMILLFGVLVAMAWGYTQVFSGRAALLHL HHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHH GAFTATIMSGNVFLTIMPNQRIVVSDLKAGRRPDPKYGEIAKQRSTHNNYLTLPVIFLML HHHHHHEECCCEEEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHH SNHYPLIFATEFNWLIASLVFLMGVTIRHWFNSRHARKGNPHWTWAATAVIFLVIAWLST CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC APMRGVPEEAALGGRAARFAAADGFAEVTDIVTGRCSMCHAAEPGWDGLHWPPKNVRLET CCCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH AAQIAHEARRIYLQAGITHAMPPGNLSYMEPEERAAIVRWYRSVAG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA