| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465509
Identifier: 77465509
GI number: 77465509
Start: 587083
End: 588405
Strand: Direct
Name: 77465509
Synonym: RSP_3508
Alternate gene names: NA
Gene position: 587083-588405 (Clockwise)
Preceding gene: 77465508
Following gene: 77465511
Centisome position: 62.26
GC content: 71.28
Gene sequence:
>1323_bases ATGCCGGAAGGCAAGATCGACACCGCCACCGCCCGCCGCAGCCTCGTGGTGCAGGGCTTCACCAACAGCGTCCTCGACCC GGCGGCCCCGATGCTCGGGCCGCTGGAGAACGGCGGCACCATCATCGCCAACACTGCGCCCGGCTGCTGGGGCCCGATGA TCACCCCGCGGCTGCGCGGCGGGCACGAGGTCACGCAGCCGGTCCATGTCGAGGGCGCGGAGCCCGGCGATGCGGTGGTC ATCCGCATCCGCGACATCACCGTGACCTCGGTGGCGACCGCGAGCGGCCACGACAGCTCGCCCGAGGGCTTCTGCCTCGG CGACCCCTACGTCGCCGCGCGCTGTCCGGTCTGCGACACGGTCTGGCCGGAGACCCATGTCGAGGGGATCGGCCCGGAGG CGGTGAAATGCGACGTCTGCGGCCATGCAGTGACGCCGTTCCAGATCGTCCACGGCTACACGGTCGTCTTCGACGAGACG CGGGCGGTGGGCGTGACCCTGCCCCCGGCCGCAGCCGAGACCATCGCCCGCGATGCCTCGCATTATGCCGCCCTGCCGGA CCAATCGGCGCAGCATTCGATCCTGACCTTTGCCCCCTCGGACATGGCCGGCGTGATGGTGCGGATGCGGCCCTTCCTCG GCCAGCTCGGCACCTGCCCCTCGAAGGCCATGCCCGACAGCCACAATGCCGGCGACTTCGGGGCCTTCCTCGTCGGCGCG CCGCACGCCTATGCGATCACCGCCGAGGAACTGGCCGAGCACAAGACCGACGGCCACATGGACATCGACGCGGTGCGACC GGGGGCGATCCTTGTGGCACCGGTCAAGGTGCGCGGCGCGGGCGTCTACATGGGCGACATGCACGCGGCTCAGGGCGATG GCGAGATCGCCGGGCATACGATGGACGTGGCGGGCAGCGTGACGCTTCAGGTCGAGGTGCTGAAGGACTGGCCCATCGAT GGGCCGGTGCTCTTTCCGCTGGCCGAAGACCTGCCGCCGCTCGCGCGGCCCTTCTCGGCGGCCGAGCGTGCCAAGGCCGA GCGGCTGGCGGCGCACTGGGGCGTGAGCGAGCTCGAGCCGTCGGCGCCGGTCTCGGTCATCGGCACTGCGGCCACGATGA ACGCCGCCATCGAGAACGGGCTGAGCCGGGCGGCGACGCTCCTCGGCATGACGGTTCCCGAGGTGCGCAACCGCGCCACC ATCACCGGCGCGATCGAGATCGGCCGCGCACCGGGCGTGATCACGGTGACCCTGCTCGCGCCGATGTCGCGGCTCGATGC GGTGGGGCTCGGCGACTATGCGCGGGAGCAATACGGGCTCTAG
Upstream 100 bases:
>100_bases GTCGCGCGCCGGAAGGATCGGCCGAGCGCGAGCGCTCTGCGCTATGCCCCGGGGTCGGGCTGCGTTAGGCTCGCCGTGAG AAAGAACAAGGAGCGCTCAC
Downstream 100 bases:
>100_bases GGGCCGTGCGTCAGGCCGTGTGGGGCTGGCCTCTCGCGGCGCCTCTGCAGAGATCCTGCACGGATCCGGCAGGCCGGGGA GACGGCCTGCCGGATACCGG
Product: acetamidase/formamidase
Products: formate; NH3
Alternate protein names: Acetamidase/Formamidase Family Protein
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MPEGKIDTATARRSLVVQGFTNSVLDPAAPMLGPLENGGTIIANTAPGCWGPMITPRLRGGHEVTQPVHVEGAEPGDAVV IRIRDITVTSVATASGHDSSPEGFCLGDPYVAARCPVCDTVWPETHVEGIGPEAVKCDVCGHAVTPFQIVHGYTVVFDET RAVGVTLPPAAAETIARDASHYAALPDQSAQHSILTFAPSDMAGVMVRMRPFLGQLGTCPSKAMPDSHNAGDFGAFLVGA PHAYAITAEELAEHKTDGHMDIDAVRPGAILVAPVKVRGAGVYMGDMHAAQGDGEIAGHTMDVAGSVTLQVEVLKDWPID GPVLFPLAEDLPPLARPFSAAERAKAERLAAHWGVSELEPSAPVSVIGTAATMNAAIENGLSRAATLLGMTVPEVRNRAT ITGAIEIGRAPGVITVTLLAPMSRLDAVGLGDYAREQYGL
Sequences:
>Translated_440_residues MPEGKIDTATARRSLVVQGFTNSVLDPAAPMLGPLENGGTIIANTAPGCWGPMITPRLRGGHEVTQPVHVEGAEPGDAVV IRIRDITVTSVATASGHDSSPEGFCLGDPYVAARCPVCDTVWPETHVEGIGPEAVKCDVCGHAVTPFQIVHGYTVVFDET RAVGVTLPPAAAETIARDASHYAALPDQSAQHSILTFAPSDMAGVMVRMRPFLGQLGTCPSKAMPDSHNAGDFGAFLVGA PHAYAITAEELAEHKTDGHMDIDAVRPGAILVAPVKVRGAGVYMGDMHAAQGDGEIAGHTMDVAGSVTLQVEVLKDWPID GPVLFPLAEDLPPLARPFSAAERAKAERLAAHWGVSELEPSAPVSVIGTAATMNAAIENGLSRAATLLGMTVPEVRNRAT ITGAIEIGRAPGVITVTLLAPMSRLDAVGLGDYAREQYGL >Mature_439_residues PEGKIDTATARRSLVVQGFTNSVLDPAAPMLGPLENGGTIIANTAPGCWGPMITPRLRGGHEVTQPVHVEGAEPGDAVVI RIRDITVTSVATASGHDSSPEGFCLGDPYVAARCPVCDTVWPETHVEGIGPEAVKCDVCGHAVTPFQIVHGYTVVFDETR AVGVTLPPAAAETIARDASHYAALPDQSAQHSILTFAPSDMAGVMVRMRPFLGQLGTCPSKAMPDSHNAGDFGAFLVGAP HAYAITAEELAEHKTDGHMDIDAVRPGAILVAPVKVRGAGVYMGDMHAAQGDGEIAGHTMDVAGSVTLQVEVLKDWPIDG PVLFPLAEDLPPLARPFSAAERAKAERLAAHWGVSELEPSAPVSVIGTAATMNAAIENGLSRAATLLGMTVPEVRNRATI TGAIEIGRAPGVITVTLLAPMSRLDAVGLGDYAREQYGL
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.49
Molecular weight: Translated: 45790; Mature: 45658
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGKIDTATARRSLVVQGFTNSVLDPAAPMLGPLENGGTIIANTAPGCWGPMITPRLRG CCCCCCCHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GHEVTQPVHVEGAEPGDAVVIRIRDITVTSVATASGHDSSPEGFCLGDPYVAARCPVCDT CCCCCCCEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCEEECCCCCC VWPETHVEGIGPEAVKCDVCGHAVTPFQIVHGYTVVFDETRAVGVTLPPAAAETIARDAS CCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEEECCCEEEEEECCHHHHHHHHCCH HYAALPDQSAQHSILTFAPSDMAGVMVRMRPFLGQLGTCPSKAMPDSHNAGDFGAFLVGA HHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC PHAYAITAEELAEHKTDGHMDIDAVRPGAILVAPVKVRGAGVYMGDMHAAQGDGEIAGHT CCEEEEEHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEE MDVAGSVTLQVEVLKDWPIDGPVLFPLAEDLPPLARPFSAAERAKAERLAAHWGVSELEP EEECCEEEEEEEEEECCCCCCCEEECCHHCCCHHHCCHHHHHHHHHHHHHHHCCHHHCCC SAPVSVIGTAATMNAAIENGLSRAATLLGMTVPEVRNRATITGAIEIGRAPGVITVTLLA CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEECCCCCEEEEEEEH PMSRLDAVGLGDYAREQYGL HHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure PEGKIDTATARRSLVVQGFTNSVLDPAAPMLGPLENGGTIIANTAPGCWGPMITPRLRG CCCCCCHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GHEVTQPVHVEGAEPGDAVVIRIRDITVTSVATASGHDSSPEGFCLGDPYVAARCPVCDT CCCCCCCEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCEEECCCCCC VWPETHVEGIGPEAVKCDVCGHAVTPFQIVHGYTVVFDETRAVGVTLPPAAAETIARDAS CCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEEECCCEEEEEECCHHHHHHHHCCH HYAALPDQSAQHSILTFAPSDMAGVMVRMRPFLGQLGTCPSKAMPDSHNAGDFGAFLVGA HHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC PHAYAITAEELAEHKTDGHMDIDAVRPGAILVAPVKVRGAGVYMGDMHAAQGDGEIAGHT CCEEEEEHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEE MDVAGSVTLQVEVLKDWPIDGPVLFPLAEDLPPLARPFSAAERAKAERLAAHWGVSELEP EEECCEEEEEEEEEECCCCCCCEEECCHHCCCHHHCCHHHHHHHHHHHHHHHCCHHHCCC SAPVSVIGTAATMNAAIENGLSRAATLLGMTVPEVRNRATITGAIEIGRAPGVITVTLLA CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEECCCCCEEEEEEEH PMSRLDAVGLGDYAREQYGL HHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formamide; H2O
Specific reaction: formamide + H2O = formate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA