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The map label for this gene is ompA [C]

Identifier: 77465494

GI number: 77465494

Start: 568532

End: 569296

Strand: Direct

Name: ompA [C]

Synonym: RSP_3494

Alternate gene names: 77465494

Gene position: 568532-569296 (Clockwise)

Preceding gene: 77465489

Following gene: 77465498

Centisome position: 60.29

GC content: 73.46

Gene sequence:

>765_bases
ATGGCCCGCCGAGCGACCCTGACGCGCCGGATCTGCGCGCTTCTTCTGGCGAGCCTCGCCGCTGCCCCGACCGGGGCCGG
CGCAGAGGGCCTGACCGATGCGGAGCTTCTCGGGCTTTTCCACCGGCAGCGCGACGCCTTCGCGGCGGCCCGGAGCGGCA
ATGGTCAGGCGCGCGGGCTGAAGCTCGTGACGGTGGACCGGATCGGGCCGGCGCCCGCCATGGCCGATGTGCCGGACAGC
CTCGGGGCGCCCGCGGGGGAGGATCCCGGCCTTCGGCCGACGGCCTCGACCGACAGCGCGCCGGGCGAGACCGGGCGGCC
GGTCCTCGGCCTGCCGCAGGGGGCCGACCGGCTGGCCGCCGCGGATCCGCCGCCCGAGGGGCGTGAGACGGCGGAAGTCT
CTCCTGAGAGCTTCGGCCTTCTCGATCCGGCGCTGCAGGTCAATGTGCGCATCCATTTCGCCTTCGACTCGGCGGTGCTG
GCCGCGGATCAGACGCCGCTTCTCGCGCAGCTCTGCACGGTGATGAAGGCGAGCGACATCCGCCTGTTTCAGATCGTGGG
CCACACCGATGCGGCGGGCAGCGAGGCCTACAACCAGCAGCTCTCGCTCCTGCGGGCCGAGGAGGTGCGCCGCTACCTGA
CCGGCCCCTGCGGCATCGCGCCGGAACGGCTGCGCGCCGTGGGGATGGGCGAGCGGTTCCTGGCCGACAAGAAGGACCCC
CGCAGCGGCGAGAACCGGCGGGTCGAGTTTCAGGCGCTGAGCTAG

Upstream 100 bases:

>100_bases
GGCAGGGTCATGGCGGCTGGTCCAAATGGGTGAAACCAATGCGCGTTCATGATAGCCTGACTCAGTGATTTCAGCTTGTC
CTTTTTGCGGGAGGACCGCG

Downstream 100 bases:

>100_bases
ACCACCGGCATCGGCCCGCTCGCGCGGCGGCCGCGGTAGATCGAGCGGACGAAGGCAGAGGCCTCCGCATCGAGATCGGC
AAGGGCAAGCCCCAGCTCCG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA/MotB; OmpA Family Protein; Outer Membrane Protein; Outer Membrane Protein OprF; Ompa Domain Protein; Thrombospondin Type 3 Repeat Family

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MARRATLTRRICALLLASLAAAPTGAGAEGLTDAELLGLFHRQRDAFAAARSGNGQARGLKLVTVDRIGPAPAMADVPDS
LGAPAGEDPGLRPTASTDSAPGETGRPVLGLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVL
AADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERFLADKKDP
RSGENRRVEFQALS

Sequences:

>Translated_254_residues
MARRATLTRRICALLLASLAAAPTGAGAEGLTDAELLGLFHRQRDAFAAARSGNGQARGLKLVTVDRIGPAPAMADVPDS
LGAPAGEDPGLRPTASTDSAPGETGRPVLGLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVL
AADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERFLADKKDP
RSGENRRVEFQALS
>Mature_253_residues
ARRATLTRRICALLLASLAAAPTGAGAEGLTDAELLGLFHRQRDAFAAARSGNGQARGLKLVTVDRIGPAPAMADVPDSL
GAPAGEDPGLRPTASTDSAPGETGRPVLGLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLA
ADQTPLLAQLCTVMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERFLADKKDPR
SGENRRVEFQALS

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26667; Mature: 26535

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRATLTRRICALLLASLAAAPTGAGAEGLTDAELLGLFHRQRDAFAAARSGNGQARGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
KLVTVDRIGPAPAMADVPDSLGAPAGEDPGLRPTASTDSAPGETGRPVLGLPQGADRLAA
EEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
ADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPLLAQLCTVMKASDI
CCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHCCC
RLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERFLADKKDP
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCCC
RSGENRRVEFQALS
CCCCCCEEEEEECC
>Mature Secondary Structure 
ARRATLTRRICALLLASLAAAPTGAGAEGLTDAELLGLFHRQRDAFAAARSGNGQARGL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
KLVTVDRIGPAPAMADVPDSLGAPAGEDPGLRPTASTDSAPGETGRPVLGLPQGADRLAA
EEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
ADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPLLAQLCTVMKASDI
CCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHCCC
RLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERFLADKKDP
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCCC
RSGENRRVEFQALS
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA