Click here to switch to the map view.

The map label for this gene is 77465472

Identifier: 77465472

GI number: 77465472

Start: 539611

End: 540390

Strand: Direct

Name: 77465472

Synonym: RSP_3470

Alternate gene names: NA

Gene position: 539611-540390 (Clockwise)

Preceding gene: 77465471

Following gene: 77465473

Centisome position: 57.22

GC content: 69.36

Gene sequence:

>780_bases
ATGAGACCAGCGGAAGAAATCGCGCGGATGCTGCCGATCCCGGCGGACCTCGGCCGGGGCGCCTTCACCGGCAAGTGGCG
CAGCGCCTCGGCGCATATCAGCCCCGAGCGGATGACGCCGCTGAAGGAGGCGCTACTCTTCAAGACCAACGCCGCTCTCT
ATTCCCTCGTCTCGGCCGCGATGGTCTGGCAGGCCGAACGGCTCCGCGAGCAGACGGACGTCTCGCCGCTCCTCGACATG
GCCGAGGCCCTCTATGCCTGGCAGCAGGACTGGCACTGGTTCGGCCGGACGCCCGCAATCGCCGACATCGACACGATCGA
CGAGGCGCCGAGGCCGCAGGGCAGCGTCCTGATGATGCTCGACCTGATCCATCAGGACCACATCTACACCTCCGGGCACT
GGCCCTCCGAACCGATCTTCTCGGTCACGGCGGACATGCTGGTGCTGACGCGGTTCAACCTGCCTGCGGACGCGGTTCCT
GCCTTCGATGCCTGGGTCGAGGCCGTGATCGCGCGGATGGATCTTGTCGCGGAATTTCCCGAGCATGGCGAGACGCCCGA
GCTCGAGGTGGGCGACACGCCCGAGCGGCGCGCCTGGGCGGCGAAAGTGATGGGCCGGCCGCTGCCGCCGTCGGTCCTCG
ACCTCTCGCGCGATCCGGACCCGTCCCGCTGGCCCGAAGAGTGGCGCGACCTGCTGGCCCGGCTCGACTGGAACCGCAAC
CCCTTCCTCCGCCACCCCCCCGGCACGCTACGCCCGCGGCAGGACGGCGAGGTGCCATGA

Upstream 100 bases:

>100_bases
TGCTGAAGAAGGCCTGCGAATGCGGCGTGAAGATCTTCCTGTGCATGGATGACGGGCCGGTAGACTGGTGCAAGGAACAG
GGCTTCGGAAAGGGCGGCGG

Downstream 100 bases:

>100_bases
GCAGAAGGCAGGAGCGGGTCTCGTGAGCGCCGTCTACGACCATGTCCGCAGCCGGACAGCCGACGAAGACTCGCGCGATC
TGTCCTTCGCCTGGGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRPAEEIARMLPIPADLGRGAFTGKWRSASAHISPERMTPLKEALLFKTNAALYSLVSAAMVWQAERLREQTDVSPLLDM
AEALYAWQQDWHWFGRTPAIADIDTIDEAPRPQGSVLMMLDLIHQDHIYTSGHWPSEPIFSVTADMLVLTRFNLPADAVP
AFDAWVEAVIARMDLVAEFPEHGETPELEVGDTPERRAWAAKVMGRPLPPSVLDLSRDPDPSRWPEEWRDLLARLDWNRN
PFLRHPPGTLRPRQDGEVP

Sequences:

>Translated_259_residues
MRPAEEIARMLPIPADLGRGAFTGKWRSASAHISPERMTPLKEALLFKTNAALYSLVSAAMVWQAERLREQTDVSPLLDM
AEALYAWQQDWHWFGRTPAIADIDTIDEAPRPQGSVLMMLDLIHQDHIYTSGHWPSEPIFSVTADMLVLTRFNLPADAVP
AFDAWVEAVIARMDLVAEFPEHGETPELEVGDTPERRAWAAKVMGRPLPPSVLDLSRDPDPSRWPEEWRDLLARLDWNRN
PFLRHPPGTLRPRQDGEVP
>Mature_259_residues
MRPAEEIARMLPIPADLGRGAFTGKWRSASAHISPERMTPLKEALLFKTNAALYSLVSAAMVWQAERLREQTDVSPLLDM
AEALYAWQQDWHWFGRTPAIADIDTIDEAPRPQGSVLMMLDLIHQDHIYTSGHWPSEPIFSVTADMLVLTRFNLPADAVP
AFDAWVEAVIARMDLVAEFPEHGETPELEVGDTPERRAWAAKVMGRPLPPSVLDLSRDPDPSRWPEEWRDLLARLDWNRN
PFLRHPPGTLRPRQDGEVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29365; Mature: 29365

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAEEIARMLPIPADLGRGAFTGKWRSASAHISPERMTPLKEALLFKTNAALYSLVSAA
CCCHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVWQAERLREQTDVSPLLDMAEALYAWQQDWHWFGRTPAIADIDTIDEAPRPQGSVLMML
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEHHH
DLIHQDHIYTSGHWPSEPIFSVTADMLVLTRFNLPADAVPAFDAWVEAVIARMDLVAEFP
HHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
EHGETPELEVGDTPERRAWAAKVMGRPLPPSVLDLSRDPDPSRWPEEWRDLLARLDWNRN
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
PFLRHPPGTLRPRQDGEVP
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPAEEIARMLPIPADLGRGAFTGKWRSASAHISPERMTPLKEALLFKTNAALYSLVSAA
CCCHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVWQAERLREQTDVSPLLDMAEALYAWQQDWHWFGRTPAIADIDTIDEAPRPQGSVLMML
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEHHH
DLIHQDHIYTSGHWPSEPIFSVTADMLVLTRFNLPADAVPAFDAWVEAVIARMDLVAEFP
HHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
EHGETPELEVGDTPERRAWAAKVMGRPLPPSVLDLSRDPDPSRWPEEWRDLLARLDWNRN
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
PFLRHPPGTLRPRQDGEVP
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA