| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is hisJ [H]
Identifier: 77465459
GI number: 77465459
Start: 527231
End: 528094
Strand: Direct
Name: hisJ [H]
Synonym: RSP_3457
Alternate gene names: 77465459
Gene position: 527231-528094 (Clockwise)
Preceding gene: 77465458
Following gene: 77465460
Centisome position: 55.91
GC content: 67.71
Gene sequence:
>864_bases ATGACCAACCCCCGCTTCGGGGGGCTTGTGGCGCTTGCCTTCATGGCCGCGACCACGCTGCCCGCCCAGTCCCAGGTGGC CGAGATCCGCGACAGCTATCGCGTGGCGCTCGACGGCACCTTCGCTCCCCATGCCATGCCGAAACTCTCGGGCGGTGTCG AAGGGTTCAACGTCGATCTGGCCCAGCTCATCGGCGAGCGTCTGGGGTCCGAGATGACGGTCGATGCGGCGCAATTCTCC GGCCTCATCCCGGCGCTGCAGGCGGGCACCTACGACTTTCTCGTGGCCCCGGTCACGGTGAATCAGGAGCGGTCCGAGAA CCTGCTCTTCACCGAAGGCTTCATGGACACGAACTTCGCCTTCGTCGTGCCGGCGGGCTCGGAGAAGCGGGACGGGATCG AGGCCTTCAAGGGGATGACGATCTCGGTCAACCGGGGTTCGGCCTACCACACCTATCTCGACGACCATGCCGCCGAATAC GGCTGGACCGTCGTGCCCTTCGGCACCAACACCGATGCGGTCGAGGCGGTGGCCACCGGACGCGCGGACGCGAACCTCTC CGGCGCGACCGTGGCGGCCTGGGCCGCGCTCCAGAACCCGGCGGTCGATCTGTCCTACGAGATCCAGACCGGGCTCGTCT GGGGGCTGGCCTTCCGGCTGGACGATGCGGCGACGCGCAACCGCGTCGATCTCGTGCTCGAATGCCTGAAGACCGACGGC TCGCTCGCGGCCCTTTCCGAGAAATGGTTCGGCGTGACGCCCGCGGCCGGCAGTACCATCGTGACGCCGACGCCGGGCTT CGGCGTGCCGGGCTTCCCGGGCTATCAGGAAGATGCCCACCAACCCTCCTGCGACTTCTCCTGA
Upstream 100 bases:
>100_bases AAGAGCCCTCATTTATATTGATGCGCCGGGGGTGCCTGTGGTCAGGATGATCTGCGGCGACAGAACCGACGAACATTCCG CCCCATCAACAGGAGATCCC
Downstream 100 bases:
>100_bases TCGCTGCCTGCCCGCCGCCCCGTCCCCGGCGGACGGGGCGGCGCCCCACCCCATCCCATCGGAGCCCGCATGTCCCGACC CATGCTCGAAATCGTCGCGC
Product: ABC polar amino acid transporter, periplasmic binding protein
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTNPRFGGLVALAFMAATTLPAQSQVAEIRDSYRVALDGTFAPHAMPKLSGGVEGFNVDLAQLIGERLGSEMTVDAAQFS GLIPALQAGTYDFLVAPVTVNQERSENLLFTEGFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEY GWTVVPFGTNTDAVEAVATGRADANLSGATVAAWAALQNPAVDLSYEIQTGLVWGLAFRLDDAATRNRVDLVLECLKTDG SLAALSEKWFGVTPAAGSTIVTPTPGFGVPGFPGYQEDAHQPSCDFS
Sequences:
>Translated_287_residues MTNPRFGGLVALAFMAATTLPAQSQVAEIRDSYRVALDGTFAPHAMPKLSGGVEGFNVDLAQLIGERLGSEMTVDAAQFS GLIPALQAGTYDFLVAPVTVNQERSENLLFTEGFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEY GWTVVPFGTNTDAVEAVATGRADANLSGATVAAWAALQNPAVDLSYEIQTGLVWGLAFRLDDAATRNRVDLVLECLKTDG SLAALSEKWFGVTPAAGSTIVTPTPGFGVPGFPGYQEDAHQPSCDFS >Mature_286_residues TNPRFGGLVALAFMAATTLPAQSQVAEIRDSYRVALDGTFAPHAMPKLSGGVEGFNVDLAQLIGERLGSEMTVDAAQFSG LIPALQAGTYDFLVAPVTVNQERSENLLFTEGFMDTNFAFVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYG WTVVPFGTNTDAVEAVATGRADANLSGATVAAWAALQNPAVDLSYEIQTGLVWGLAFRLDDAATRNRVDLVLECLKTDGS LAALSEKWFGVTPAAGSTIVTPTPGFGVPGFPGYQEDAHQPSCDFS
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=23.9130434782609, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788649, Length=250, Percent_Identity=24.4, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787088, Length=228, Percent_Identity=26.7543859649123, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1787085, Length=250, Percent_Identity=25.2, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787031, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788228, Length=256, Percent_Identity=25.78125, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30355; Mature: 30224
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPRFGGLVALAFMAATTLPAQSQVAEIRDSYRVALDGTFAPHAMPKLSGGVEGFNVDL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCCHHHCCCCCCCCCHH AQLIGERLGSEMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQERSENLLFTEGFMDTNFA HHHHHHHCCCCEEEEHHHHHCCCHHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCE FVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYGWTVVPFGTNTDAVEAVATG EEEECCCCCCCCHHHHCCEEEEEECCCEEEEHHHHHHHHCCCEEEECCCCCHHHHHHHCC RADANLSGATVAAWAALQNPAVDLSYEIQTGLVWGLAFRLDDAATRNRVDLVLECLKTDG CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHCCC SLAALSEKWFGVTPAAGSTIVTPTPGFGVPGFPGYQEDAHQPSCDFS CEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNPRFGGLVALAFMAATTLPAQSQVAEIRDSYRVALDGTFAPHAMPKLSGGVEGFNVDL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCCHHHCCCCCCCCCHH AQLIGERLGSEMTVDAAQFSGLIPALQAGTYDFLVAPVTVNQERSENLLFTEGFMDTNFA HHHHHHHCCCCEEEEHHHHHCCCHHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCE FVVPAGSEKRDGIEAFKGMTISVNRGSAYHTYLDDHAAEYGWTVVPFGTNTDAVEAVATG EEEECCCCCCCCHHHHCCEEEEEECCCEEEEHHHHHHHHCCCEEEECCCCCHHHHHHHCC RADANLSGATVAAWAALQNPAVDLSYEIQTGLVWGLAFRLDDAATRNRVDLVLECLKTDG CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHCCC SLAALSEKWFGVTPAAGSTIVTPTPGFGVPGFPGYQEDAHQPSCDFS CEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]