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The map label for this gene is tse [H]

Identifier: 77465422

GI number: 77465422

Start: 488557

End: 490131

Strand: Direct

Name: tse [H]

Synonym: RSP_3420

Alternate gene names: 77465422

Gene position: 488557-490131 (Clockwise)

Preceding gene: 77465421

Following gene: 77465423

Centisome position: 51.81

GC content: 68.51

Gene sequence:

>1575_bases
ATGATGCTCTCCCTCAAGGCCAAGACGGCCCTCACTTTCGGCCTCGTATTGACGGGGGTTGCAATCACCGTGGCGCTTGC
CATCGGCAGTCTCAACCAGGTGGCGGGAAATCTCACGCGGTTGACCCGGCTGGAGCTTCTGGCGCTCGAGGCTGCGCATG
AGTTCGCCCTGTCGCAAAGCCGCGCCGAGACGCTGGTGGCCAGATACGGGCTGGCGCTCTCCCGGGGTGGCGAGCTCTCC
GGTGTCGACCGTCACTTGCGACGGCTGGAAGAGGATCTGGCGAAAGCGCTCCACAGCCAGCGGCAGGCCGTGGCAGACCT
GCAGGCGCATGTGACGTTGCAGGAAGACGTCGCAAGTATCGCGGTCCTTCAGAGCTACGGCTCGCTGGTGGAAGCCGCGT
CGACGAAGAGCCTCCGCCGAGCGACGGCCGGCGATCCGGCGGGGGCTCAGGCGGCGCTGGCCGACCCGTCCCTCCTCATG
GCCCGCGCCGCGGGGGAGCAGGCGCTTGCCGACATCACCCGCAGGCAGTGGGACACCGTGGGCCGAACCGCCGCCCGGAC
AGTGGATCTGGCCACGCGCCGAGGATGGATCATGCTGACCGTCGTCGTCAGCGCCTGCGCCACCGCCGGCACACTCGCGG
TCTGGATCGTGCTCTCGATCGGGCGGGGCTTGTCCAGCGCGCTGGCGCTGTCGAGCCGTCTGGCCGAGGGCGATCTCAGC
GCCACCGTCCCCATCACCGGACGGGACGGAATGGCCCACCTCCTGCAGTCGAACAACGAGGTGGTGCTTCAGCTGCGCAC
CGTCGTCGAGGCCGTGACCGCCTCGTCTGGCGCCCTCACGGGCCTGAGCGCCCGGGTTGCGGCCACGTCCGAGCAGATGT
CGGTGAATGCCATGGAGCAGATCTCGGCCACGGGCGAGGCCGCTTCCGCGGTCACGGGCATCCAGAGCAGCCTCGAGCAG
TCGGTCGAGCGCGCCGCCGCCTGCGAAAGCGTGGCGGCGCGCGCCGCGCAGGATGCGCGCGCCTCGGAGAAGGTCGTTGG
AGAGGCGCTCCGCTCCATGAAGAAGATCGCGGAACATATTCTCGTCATGCAGGAAATCGCGCGGCAGACCGATCTTCTCG
CCCTGAATGCGGCGGTGGAGGCCGCCCGCGCGGGCGAGCGGGGCCTGGGCTTTGCAGTCGTGGCCAGCGAGGTCAGAAAG
CTCGCCGAGCGCAGCCAGGACGCGGCCAAGGAAGTCTCGACCCTCTCCCACTCGACGTCGCAGGCGGCCGTGGCGGCGGG
CGATATCATCGGGCGCCTCATCCCGGATATCGAACTCACCTCCACGCTCGCGACCGAGATTGCATCCGTGGCACGGGATC
TGAGCGGCGAGATCCGCTCGGTGACCGGTTCGATCGACACGCTCGACACGCTCAGCAAGCAGAATTCCTCCGTATCGGAC
GAACTCTGGAACGGCTCTGCCGAGCTCTCAGGCCAGGCGGAGATCCTCGCAAACGCGATCCGCTACTTCGACGCATCGGA
CAGGAGCGGGCCTTCGGACGAGCCCGAGGAGGGGCTGCAGGCCGCGGCAGCATGA

Upstream 100 bases:

>100_bases
AGATTGCGGCCGGACCCTGACGCTGCCGGCCGCCGGAGGTGCAGGGGTCCGTTTCTGCCCGCGCACGTCTGCTGCTCAGT
TCACTCGTTTGGTTCGGACC

Downstream 100 bases:

>100_bases
AGACCGTCCGGCGCCCCGGCGTCCGGAGGCCTATCCGCAGCAGCGAACACGGAAACGATGGCAAGGGAATGGATCCAGCG
TCAGCACACACCACTGCCGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MMLSLKAKTALTFGLVLTGVAITVALAIGSLNQVAGNLTRLTRLELLALEAAHEFALSQSRAETLVARYGLALSRGGELS
GVDRHLRRLEEDLAKALHSQRQAVADLQAHVTLQEDVASIAVLQSYGSLVEAASTKSLRRATAGDPAGAQAALADPSLLM
ARAAGEQALADITRRQWDTVGRTAARTVDLATRRGWIMLTVVVSACATAGTLAVWIVLSIGRGLSSALALSSRLAEGDLS
ATVPITGRDGMAHLLQSNNEVVLQLRTVVEAVTASSGALTGLSARVAATSEQMSVNAMEQISATGEAASAVTGIQSSLEQ
SVERAAACESVAARAAQDARASEKVVGEALRSMKKIAEHILVMQEIARQTDLLALNAAVEAARAGERGLGFAVVASEVRK
LAERSQDAAKEVSTLSHSTSQAAVAAGDIIGRLIPDIELTSTLATEIASVARDLSGEIRSVTGSIDTLDTLSKQNSSVSD
ELWNGSAELSGQAEILANAIRYFDASDRSGPSDEPEEGLQAAAA

Sequences:

>Translated_524_residues
MMLSLKAKTALTFGLVLTGVAITVALAIGSLNQVAGNLTRLTRLELLALEAAHEFALSQSRAETLVARYGLALSRGGELS
GVDRHLRRLEEDLAKALHSQRQAVADLQAHVTLQEDVASIAVLQSYGSLVEAASTKSLRRATAGDPAGAQAALADPSLLM
ARAAGEQALADITRRQWDTVGRTAARTVDLATRRGWIMLTVVVSACATAGTLAVWIVLSIGRGLSSALALSSRLAEGDLS
ATVPITGRDGMAHLLQSNNEVVLQLRTVVEAVTASSGALTGLSARVAATSEQMSVNAMEQISATGEAASAVTGIQSSLEQ
SVERAAACESVAARAAQDARASEKVVGEALRSMKKIAEHILVMQEIARQTDLLALNAAVEAARAGERGLGFAVVASEVRK
LAERSQDAAKEVSTLSHSTSQAAVAAGDIIGRLIPDIELTSTLATEIASVARDLSGEIRSVTGSIDTLDTLSKQNSSVSD
ELWNGSAELSGQAEILANAIRYFDASDRSGPSDEPEEGLQAAAA
>Mature_524_residues
MMLSLKAKTALTFGLVLTGVAITVALAIGSLNQVAGNLTRLTRLELLALEAAHEFALSQSRAETLVARYGLALSRGGELS
GVDRHLRRLEEDLAKALHSQRQAVADLQAHVTLQEDVASIAVLQSYGSLVEAASTKSLRRATAGDPAGAQAALADPSLLM
ARAAGEQALADITRRQWDTVGRTAARTVDLATRRGWIMLTVVVSACATAGTLAVWIVLSIGRGLSSALALSSRLAEGDLS
ATVPITGRDGMAHLLQSNNEVVLQLRTVVEAVTASSGALTGLSARVAATSEQMSVNAMEQISATGEAASAVTGIQSSLEQ
SVERAAACESVAARAAQDARASEKVVGEALRSMKKIAEHILVMQEIARQTDLLALNAAVEAARAGERGLGFAVVASEVRK
LAERSQDAAKEVSTLSHSTSQAAVAAGDIIGRLIPDIELTSTLATEIASVARDLSGEIRSVTGSIDTLDTLSKQNSSVSD
ELWNGSAELSGQAEILANAIRYFDASDRSGPSDEPEEGLQAAAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=269, Percent_Identity=34.2007434944238, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI2367378, Length=296, Percent_Identity=30.4054054054054, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787690, Length=370, Percent_Identity=30, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1788194, Length=365, Percent_Identity=25.4794520547945, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1789453, Length=282, Percent_Identity=25.531914893617, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 54386; Mature: 54386

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSLKAKTALTFGLVLTGVAITVALAIGSLNQVAGNLTRLTRLELLALEAAHEFALSQS
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAETLVARYGLALSRGGELSGVDRHLRRLEEDLAKALHSQRQAVADLQAHVTLQEDVASI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLQSYGSLVEAASTKSLRRATAGDPAGAQAALADPSLLMARAAGEQALADITRRQWDTV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH
GRTAARTVDLATRRGWIMLTVVVSACATAGTLAVWIVLSIGRGLSSALALSSRLAEGDLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
ATVPITGRDGMAHLLQSNNEVVLQLRTVVEAVTASSGALTGLSARVAATSEQMSVNAMEQ
EEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHH
ISATGEAASAVTGIQSSLEQSVERAAACESVAARAAQDARASEKVVGEALRSMKKIAEHI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMQEIARQTDLLALNAAVEAARAGERGLGFAVVASEVRKLAERSQDAAKEVSTLSHSTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QAAVAAGDIIGRLIPDIELTSTLATEIASVARDLSGEIRSVTGSIDTLDTLSKQNSSVSD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCHH
ELWNGSAELSGQAEILANAIRYFDASDRSGPSDEPEEGLQAAAA
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMLSLKAKTALTFGLVLTGVAITVALAIGSLNQVAGNLTRLTRLELLALEAAHEFALSQS
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAETLVARYGLALSRGGELSGVDRHLRRLEEDLAKALHSQRQAVADLQAHVTLQEDVASI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLQSYGSLVEAASTKSLRRATAGDPAGAQAALADPSLLMARAAGEQALADITRRQWDTV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH
GRTAARTVDLATRRGWIMLTVVVSACATAGTLAVWIVLSIGRGLSSALALSSRLAEGDLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
ATVPITGRDGMAHLLQSNNEVVLQLRTVVEAVTASSGALTGLSARVAATSEQMSVNAMEQ
EEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHH
ISATGEAASAVTGIQSSLEQSVERAAACESVAARAAQDARASEKVVGEALRSMKKIAEHI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMQEIARQTDLLALNAAVEAARAGERGLGFAVVASEVRKLAERSQDAAKEVSTLSHSTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QAAVAAGDIIGRLIPDIELTSTLATEIASVARDLSGEIRSVTGSIDTLDTLSKQNSSVSD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCHH
ELWNGSAELSGQAEILANAIRYFDASDRSGPSDEPEEGLQAAAA
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]