| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is proC [H]
Identifier: 77465365
GI number: 77465365
Start: 428054
End: 428821
Strand: Direct
Name: proC [H]
Synonym: RSP_3364
Alternate gene names: 77465365
Gene position: 428054-428821 (Clockwise)
Preceding gene: 77465364
Following gene: 77465366
Centisome position: 45.39
GC content: 74.22
Gene sequence:
>768_bases ATGGGCTCGGCGATGCTCGAGGGCTGGCTCGGACGGGGCCTTGCGCTCTCCGCCGTCTGGGTGACGGACCCCAGGCCGTC GGACTGGCTGAAATCGCTCGCGGCGCGCGGGCTGCATCTGAACGAGGCGCTGCCCGACGAGCCCGCGGTGGTGCTGGTCG CGGTCAAGCCGCAGATGATGTCCGAGGCCCTGCCGGGGCTCGCGGCGCTCGGCGAAGGGCGGGTGCTTTTCCTGACGGTC GCGGCGGGCACGCCCATCTCCTATTACGAACGCACGCTGGGCGCGGCCACGCCGGTGATCCGCGCCATGCCGAACACACC CGCGGCGGTCGGCCGCGGCATCACGGCGCTGGTGGGCAATGCTGCCGCCTCGGAGGCGCAGATGGCGCTGGCCGAGGATC TCCTCTCGGCGGTGGGCCAGGTGGTCCGGCTCGAGGGCGAGCATCAGATGGATGCGGTGACCGCGGTCTCGGGCTCGGGG CCGGCCTATGTCTTCCACCTGATCGAGGCGCTCGCCGCAGCGGGCGAGGCCGAGGGGCTGCCGGCCGATCTCGCCATGAC CCTCGCCCGCGCCACCGTCACCGGCGCGGGCGAGCTTGCCCATCGCGCGCCGGAAAGCGCGAGCCAGCTGCGCGTGAACG TGACCTCGCCGGGGGGCACGACGGCGGCGGCGCTCGGCGTGCTGATGGATCCCGAGAGCGGCCTGCCGCCGCTCCTCCGC CGCGCGGTGAAGGCTGCGGCCGACCGCGGACGGGAGCTCGGCCGATGA
Upstream 100 bases:
>100_bases GGCCTACGGCCGCGCCTAGTCTTTCCCCGCACAAACGGGGGAAACAATGGATCTTGCGGATCTTGGCCGCCGGGGGCTGG TGCTGCTCGGCTGCGGGAAG
Downstream 100 bases:
>100_bases TCGCCTACGAGGATTTCGCCAAGGTCGACATCCGCGTGGGCCGCATCACCCGCGCCGAACCCTTCCCCGAGGCACGCAAG CCCGCCCTGAAGCTCTGGGT
Product: pyrroline-5-carboxylate reductase
Products: NA
Alternate protein names: P5C reductase; P5CR [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGSAMLEGWLGRGLALSAVWVTDPRPSDWLKSLAARGLHLNEALPDEPAVVLVAVKPQMMSEALPGLAALGEGRVLFLTV AAGTPISYYERTLGAATPVIRAMPNTPAAVGRGITALVGNAAASEAQMALAEDLLSAVGQVVRLEGEHQMDAVTAVSGSG PAYVFHLIEALAAAGEAEGLPADLAMTLARATVTGAGELAHRAPESASQLRVNVTSPGGTTAAALGVLMDPESGLPPLLR RAVKAAADRGRELGR
Sequences:
>Translated_255_residues MGSAMLEGWLGRGLALSAVWVTDPRPSDWLKSLAARGLHLNEALPDEPAVVLVAVKPQMMSEALPGLAALGEGRVLFLTV AAGTPISYYERTLGAATPVIRAMPNTPAAVGRGITALVGNAAASEAQMALAEDLLSAVGQVVRLEGEHQMDAVTAVSGSG PAYVFHLIEALAAAGEAEGLPADLAMTLARATVTGAGELAHRAPESASQLRVNVTSPGGTTAAALGVLMDPESGLPPLLR RAVKAAADRGRELGR >Mature_254_residues GSAMLEGWLGRGLALSAVWVTDPRPSDWLKSLAARGLHLNEALPDEPAVVLVAVKPQMMSEALPGLAALGEGRVLFLTVA AGTPISYYERTLGAATPVIRAMPNTPAAVGRGITALVGNAAASEAQMALAEDLLSAVGQVVRLEGEHQMDAVTAVSGSGP AYVFHLIEALAAAGEAEGLPADLAMTLARATVTGAGELAHRAPESASQLRVNVTSPGGTTAAALGVLMDPESGLPPLLRR AVKAAADRGRELGR
Specific function: Proline biosynthesis; third (last) step. [C]
COG id: COG0345
COG function: function code E; Pyrroline-5-carboxylate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrroline-5-carboxylate reductase family [H]
Homologues:
Organism=Homo sapiens, GI24797095, Length=216, Percent_Identity=39.8148148148148, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI24797097, Length=216, Percent_Identity=39.8148148148148, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI21361454, Length=266, Percent_Identity=36.0902255639098, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI198041662, Length=263, Percent_Identity=29.6577946768061, Blast_Score=96, Evalue=2e-20, Organism=Escherichia coli, GI1786585, Length=259, Percent_Identity=30.8880308880309, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17569021, Length=259, Percent_Identity=33.2046332046332, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17540664, Length=276, Percent_Identity=25.7246376811594, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320861, Length=213, Percent_Identity=34.7417840375587, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI21358587, Length=258, Percent_Identity=38.7596899224806, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24647700, Length=171, Percent_Identity=42.6900584795322, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24648116, Length=254, Percent_Identity=32.6771653543307, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR000304 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: =1.5.1.2 [H]
Molecular weight: Translated: 25976; Mature: 25845
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAMLEGWLGRGLALSAVWVTDPRPSDWLKSLAARGLHLNEALPDEPAVVLVAVKPQMM CCCHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHH SEALPGLAALGEGRVLFLTVAAGTPISYYERTLGAATPVIRAMPNTPAAVGRGITALVGN HHHCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCHHHHCCCCCCHHHHCCHHHHHCC AAASEAQMALAEDLLSAVGQVVRLEGEHQMDAVTAVSGSGPAYVFHLIEALAAAGEAEGL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCC PADLAMTLARATVTGAGELAHRAPESASQLRVNVTSPGGTTAAALGVLMDPESGLPPLLR CHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHEEECCCCCCCHHHH RAVKAAADRGRELGR HHHHHHHHHHHHCCC >Mature Secondary Structure GSAMLEGWLGRGLALSAVWVTDPRPSDWLKSLAARGLHLNEALPDEPAVVLVAVKPQMM CCHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHH SEALPGLAALGEGRVLFLTVAAGTPISYYERTLGAATPVIRAMPNTPAAVGRGITALVGN HHHCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCHHHHCCCCCCHHHHCCHHHHHCC AAASEAQMALAEDLLSAVGQVVRLEGEHQMDAVTAVSGSGPAYVFHLIEALAAAGEAEGL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCC PADLAMTLARATVTGAGELAHRAPESASQLRVNVTSPGGTTAAALGVLMDPESGLPPLLR CHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHEEECCCCCCCHHHH RAVKAAADRGRELGR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]