| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is bcsP31 [H]
Identifier: 77465305
GI number: 77465305
Start: 360413
End: 361459
Strand: Direct
Name: bcsP31 [H]
Synonym: RSP_3299
Alternate gene names: 77465305
Gene position: 360413-361459 (Clockwise)
Preceding gene: 77465304
Following gene: 77465306
Centisome position: 38.22
GC content: 65.43
Gene sequence:
>1047_bases TTGCCCGTTATCAGACTGATCGCGATTGCCCTGTTGCTCGTGGGCCTTCCGTCCCGGCTTCCCGCTCTGGAGGTCAACAT GCTTACGGGAGGTCCGACCGGAACCTACATCCAGATCGGCCGCGACATCGCGAAGGCCGCCTCGGCCTGCGGCATCGAGA TGACCGTGCATGAAAGCGCGGGCTCGCTCGAGAATTTCCTCGGCGTCCGTCAGCGCCCGCGCACACAGTTCGGCATCGTC CAGTCGGATGTGCTCGAATATCTCAAGACCTTCGCCGCCGACGATCCCGAGGTGAGCCGCGCGATCTTCGGCGTCCGCAT CGCCTTTCCGCTCTACGACGAGGAGGTGCATCTTCTGGCGCGGAGGGAGATCGGCAGCCTGAAGGACCTCGACGGCAAGC GCGTCTCGATCGGGGTGGAGAATTCCGGCACCTTCCTCACCGCCTCGCTCGTCCTCGACCTTGCAGAGGTCGCGCCCGGC GAGCGCAGGATGATGAACCAGGACGACTCGCTCAAGGCGCTGCTGGCCGGAGACATCGACGCCTTCTTCTATGTGGCCGG TGCGCCTGCAAAAATCTTCGCCTCGCCCGAGATCGACGGCGAGCGGTTCCATCTGGTGCCGGTGGCCGAAGAAGTGCTGC GGCAGGTCTACAAGCCCACCCAGATCCCCGCCGGCAGCTATCCGTTCCAGACAGGGCCGGTCGATGCCATCGCGGTCAAG GCCGTGCTGATGACCTACGGCTACGATCCCAAGCGCAACGCCTATCACCGCGAAAGCTGCAAGGCGGTGTCGGACATCGC CCATGTGGTGAGCACCCATTTCCCCGAGCTCCAGCAATCGGGCCATCCCAAATGGAAGCAGGTGAACCTGACCGATCTGC CGGCGGGCTGGGACATCGGCGAATGCGTCAATGCGGGTCTGGAACCCGGCTATCGGCTTCCCTGCGATCCGCCCGAGCCC GCGGTGGCCGCCCCTGCCGACGCCTCGGCCGAGAGCGAGGCGAACCGGGCCTACCGGCGGCAGATCTGCGCCGTGGTGGG CTGCTGA
Upstream 100 bases:
>100_bases CACCGCGACGGGGACCGTCAACCGCCAGTCGCTCGTGGCCCTCGTCCGATCCCTCGGCGGCTGCTGAGCCGTTCCCGATT CCGAAGCGCAGGAGGAACCC
Downstream 100 bases:
>100_bases TCCATCGGCGGGATCCGGCCGGGCCGGCCCCCGCCGCCACCGTTTTGACAGAGAATGCACGGCGCCTTGACGCGGCGTTG CGGGAGGCAGGCGACAAGGG
Product: TRAP-T family transporter periplasmic binding component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPVIRLIAIALLLVGLPSRLPALEVNMLTGGPTGTYIQIGRDIAKAASACGIEMTVHESAGSLENFLGVRQRPRTQFGIV QSDVLEYLKTFAADDPEVSRAIFGVRIAFPLYDEEVHLLARREIGSLKDLDGKRVSIGVENSGTFLTASLVLDLAEVAPG ERRMMNQDDSLKALLAGDIDAFFYVAGAPAKIFASPEIDGERFHLVPVAEEVLRQVYKPTQIPAGSYPFQTGPVDAIAVK AVLMTYGYDPKRNAYHRESCKAVSDIAHVVSTHFPELQQSGHPKWKQVNLTDLPAGWDIGECVNAGLEPGYRLPCDPPEP AVAAPADASAESEANRAYRRQICAVVGC
Sequences:
>Translated_348_residues MPVIRLIAIALLLVGLPSRLPALEVNMLTGGPTGTYIQIGRDIAKAASACGIEMTVHESAGSLENFLGVRQRPRTQFGIV QSDVLEYLKTFAADDPEVSRAIFGVRIAFPLYDEEVHLLARREIGSLKDLDGKRVSIGVENSGTFLTASLVLDLAEVAPG ERRMMNQDDSLKALLAGDIDAFFYVAGAPAKIFASPEIDGERFHLVPVAEEVLRQVYKPTQIPAGSYPFQTGPVDAIAVK AVLMTYGYDPKRNAYHRESCKAVSDIAHVVSTHFPELQQSGHPKWKQVNLTDLPAGWDIGECVNAGLEPGYRLPCDPPEP AVAAPADASAESEANRAYRRQICAVVGC >Mature_347_residues PVIRLIAIALLLVGLPSRLPALEVNMLTGGPTGTYIQIGRDIAKAASACGIEMTVHESAGSLENFLGVRQRPRTQFGIVQ SDVLEYLKTFAADDPEVSRAIFGVRIAFPLYDEEVHLLARREIGSLKDLDGKRVSIGVENSGTFLTASLVLDLAEVAPGE RRMMNQDDSLKALLAGDIDAFFYVAGAPAKIFASPEIDGERFHLVPVAEEVLRQVYKPTQIPAGSYPFQTGPVDAIAVKA VLMTYGYDPKRNAYHRESCKAVSDIAHVVSTHFPELQQSGHPKWKQVNLTDLPAGWDIGECVNAGLEPGYRLPCDPPEPA VAAPADASAESEANRAYRRQICAVVGC
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 37638; Mature: 37507
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIRLIAIALLLVGLPSRLPALEVNMLTGGPTGTYIQIGRDIAKAASACGIEMTVHESA CCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHCCEEEEEECCC GSLENFLGVRQRPRTQFGIVQSDVLEYLKTFAADDPEVSRAIFGVRIAFPLYDEEVHLLA CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCHHHHHH RREIGSLKDLDGKRVSIGVENSGTFLTASLVLDLAEVAPGERRMMNQDDSLKALLAGDID HHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCC AFFYVAGAPAKIFASPEIDGERFHLVPVAEEVLRQVYKPTQIPAGSYPFQTGPVDAIAVK EEEEEECCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AVLMTYGYDPKRNAYHRESCKAVSDIAHVVSTHFPELQQSGHPKWKQVNLTDLPAGWDIG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCHH ECVNAGLEPGYRLPCDPPEPAVAAPADASAESEANRAYRRQICAVVGC HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVIRLIAIALLLVGLPSRLPALEVNMLTGGPTGTYIQIGRDIAKAASACGIEMTVHESA CHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHCCEEEEEECCC GSLENFLGVRQRPRTQFGIVQSDVLEYLKTFAADDPEVSRAIFGVRIAFPLYDEEVHLLA CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCHHHHHH RREIGSLKDLDGKRVSIGVENSGTFLTASLVLDLAEVAPGERRMMNQDDSLKALLAGDID HHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCC AFFYVAGAPAKIFASPEIDGERFHLVPVAEEVLRQVYKPTQIPAGSYPFQTGPVDAIAVK EEEEEECCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AVLMTYGYDPKRNAYHRESCKAVSDIAHVVSTHFPELQQSGHPKWKQVNLTDLPAGWDIG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCHH ECVNAGLEPGYRLPCDPPEPAVAAPADASAESEANRAYRRQICAVVGC HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]