| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is fccB [H]
Identifier: 77465213
GI number: 77465213
Start: 251744
End: 252766
Strand: Direct
Name: fccB [H]
Synonym: RSP_3199
Alternate gene names: 77465213
Gene position: 251744-252766 (Clockwise)
Preceding gene: 77465212
Following gene: 77465214
Centisome position: 26.7
GC content: 77.91
Gene sequence:
>1023_bases ATGATGCAGAGCCTGAGCCGCCGCCATTTCACCTTTGGCCTTGCCGCCGCAGCCAGTCTCGCGGCAGGAGGCGCCGCCTT CGCGCTTCGTCCGGGCGAGCGCGTCCTCGTCGTGGGCGGCGGTCCCGCCGGGGCCGAGGCGGCGCTTGCGCTCCGGGCCG CTCATCCCCGGGCTTCGGTGCTGCTCGTCGAGCGCGATCCGACGCGGCTTGCGCGCGAGCCGGATGAGGCGGGCCTTGCG GGTTTCCTGCGCCCGCGCGCCGAGGCGGGGCTTGCGGCCCTGAAGGCCGCGGGCGTGGGTCTCGCCCTCGACGAGGTGGT GAGCGTCGACTGGGCCGCGGGGCGGGCCGTCCTCTTCTCGGGCCGCGATCTGGCCTTCGACCGGCTACTGCTCGCGCCCG GCACGGCGCCGCGCGACGAGGCGATTTCGGGGCTCGATGCGGTGGCCCGCCACGCATGGCCCGCCGCCTGGGGCAGCCCG CGCGAGGCCCGACGTCTGCTCGCAGGCCTTCAGGCGCTGCCCGAGCGCGGCCATGTCGTCCTGCGCCTGCCCGAGGGCGA GGCCGCCCATCCCGCGGCGGCGCTCGGCCGGGCGCTGGCGCTGGCGGGCCATGTGGCGCGGCGGCCGGGCGCGCGGCTGA CGGTGCTCGACGGCTCGAAGGGCGCGGATCTCGCCCGCGCCTTCGCCGACCGTGCCCCTGCCGAGGCGGCTGCCCGGGTG GAGTGGGTCTCGGCCGCACAGGGCGGGCGGGTGCGCGCGGTGGATGCGCGGGCAGGGCTGATCGAGACCGAGGCGGGACC GATCCGCGCGGATGTGGTGAATTTCGTGCCGGCGCTGCGGGCGGGGGCCATCGCCGCGGCGGCGGGCCTTGCCGATACGA GCGGCTGGTGCCCCTGCGATGCGGCGGGCCGGTCCGTCCTGCGGCGCGAGGCGCTGGTGCTGGGCGACGCGCGGAAGTCG GCCCCGCGCACCGTGGCCGAGGCGCTCCGGTCGGCGCGGGCGGCCACGGATCACCTCGCCTGA
Upstream 100 bases:
>100_bases ATCTACCGCCCGATCCATCCCGAAGCCGAGCTCTTGGAAAAGAAACGCTGATCCCGGGCGTCCCGGCCGCGGGCCGGGCC CGGTCCCGCTAGGAGACCTG
Downstream 100 bases:
>100_bases GGGGAACGGCCGGGCGCGGAGCGTCGCAAGCGCAGGGCACGGGCGCTCCGGCGCCTCTGCGGCCGGAGCGGTGCGGCAGG GCGGACTTGCACCCCGGCCC
Product: sulfide dehydrogenase (flavocytochrome), flavoprotein subunit
Products: NA
Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MMQSLSRRHFTFGLAAAASLAAGGAAFALRPGERVLVVGGGPAGAEAALALRAAHPRASVLLVERDPTRLAREPDEAGLA GFLRPRAEAGLAALKAAGVGLALDEVVSVDWAAGRAVLFSGRDLAFDRLLLAPGTAPRDEAISGLDAVARHAWPAAWGSP REARRLLAGLQALPERGHVVLRLPEGEAAHPAAALGRALALAGHVARRPGARLTVLDGSKGADLARAFADRAPAEAAARV EWVSAAQGGRVRAVDARAGLIETEAGPIRADVVNFVPALRAGAIAAAAGLADTSGWCPCDAAGRSVLRREALVLGDARKS APRTVAEALRSARAATDHLA
Sequences:
>Translated_340_residues MMQSLSRRHFTFGLAAAASLAAGGAAFALRPGERVLVVGGGPAGAEAALALRAAHPRASVLLVERDPTRLAREPDEAGLA GFLRPRAEAGLAALKAAGVGLALDEVVSVDWAAGRAVLFSGRDLAFDRLLLAPGTAPRDEAISGLDAVARHAWPAAWGSP REARRLLAGLQALPERGHVVLRLPEGEAAHPAAALGRALALAGHVARRPGARLTVLDGSKGADLARAFADRAPAEAAARV EWVSAAQGGRVRAVDARAGLIETEAGPIRADVVNFVPALRAGAIAAAAGLADTSGWCPCDAAGRSVLRREALVLGDARKS APRTVAEALRSARAATDHLA >Mature_340_residues MMQSLSRRHFTFGLAAAASLAAGGAAFALRPGERVLVVGGGPAGAEAALALRAAHPRASVLLVERDPTRLAREPDEAGLA GFLRPRAEAGLAALKAAGVGLALDEVVSVDWAAGRAVLFSGRDLAFDRLLLAPGTAPRDEAISGLDAVARHAWPAAWGSP REARRLLAGLQALPERGHVVLRLPEGEAAHPAAALGRALALAGHVARRPGARLTVLDGSKGADLARAFADRAPAEAAARV EWVSAAQGGRVRAVDARAGLIETEAGPIRADVVNFVPALRAGAIAAAAGLADTSGWCPCDAAGRSVLRREALVLGDARKS APRTVAEALRSARAATDHLA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR015323 - InterPro: IPR015904 - InterPro: IPR006311 [H]
Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 34704; Mature: 34704
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQSLSRRHFTFGLAAAASLAAGGAAFALRPGERVLVVGGGPAGAEAALALRAAHPRASV CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEE LLVERDPTRLAREPDEAGLAGFLRPRAEAGLAALKAAGVGLALDEVVSVDWAAGRAVLFS EEEECCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEE GRDLAFDRLLLAPGTAPRDEAISGLDAVARHAWPAAWGSPREARRLLAGLQALPERGHVV CCCHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEE LRLPEGEAAHPAAALGRALALAGHVARRPGARLTVLDGSKGADLARAFADRAPAEAAARV EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHH EWVSAAQGGRVRAVDARAGLIETEAGPIRADVVNFVPALRAGAIAAAAGLADTSGWCPCD HHHHHCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAGRSVLRREALVLGDARKSAPRTVAEALRSARAATDHLA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMQSLSRRHFTFGLAAAASLAAGGAAFALRPGERVLVVGGGPAGAEAALALRAAHPRASV CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEE LLVERDPTRLAREPDEAGLAGFLRPRAEAGLAALKAAGVGLALDEVVSVDWAAGRAVLFS EEEECCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEE GRDLAFDRLLLAPGTAPRDEAISGLDAVARHAWPAAWGSPREARRLLAGLQALPERGHVV CCCHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEE LRLPEGEAAHPAAALGRALALAGHVARRPGARLTVLDGSKGADLARAFADRAPAEAAARV EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHH EWVSAAQGGRVRAVDARAGLIETEAGPIRADVVNFVPALRAGAIAAAAGLADTSGWCPCD HHHHHCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAGRSVLRREALVLGDARKSAPRTVAEALRSARAATDHLA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8390993; 1649169; 7939681 [H]