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The map label for this gene is ycgM [C]

Identifier: 77465183

GI number: 77465183

Start: 223321

End: 224019

Strand: Direct

Name: ycgM [C]

Synonym: RSP_3169

Alternate gene names: 77465183

Gene position: 223321-224019 (Clockwise)

Preceding gene: 77465171

Following gene: 77465184

Centisome position: 23.68

GC content: 65.67

Gene sequence:

>699_bases
ATGGCGGCCTACGTCCTACCCACCGCGGCGCAAGCCCACCTCGATGTCGTCGGCAGCGACGAGAAATTCCCGGTGCGCCG
CGTCTATTGCATCGGCAAGAACTACGTCGCCCACATCCGCGAGATGAATGCGGACGAGCGCGACCCGCCGGTGATCTTCA
TGAAGCCTGCGGATGCGGTGGTGCGCAACGGCGGCGAGATCCCCTATCCGGTCTTCACCGAGAACTTCCATTACGAATGC
GAGCTCGTGGTGGTGCTGAAGTCGGGCGGCTACAACATCTCGGTCGCCGATGCCGCCAGCCACATCTACGGCTATGCCGT
GGGCCTCGACATGACGCGGCGCGACCATCAGAAGGGCGTGCTGGAAAAAGGCCTGCCGTGGGAGGTCACGAAGGCCTTCG
ACCTCTCGGCCCCGATCGGCCCCGTCACCCGCGCCGAGGAGTGCGGGGTGCTGACCTCGGGCCAGCTCACGCTGAAGGTG
AACGGGGAGGTCAAGCAGGATGCCGACATCGGGCTGATGATCTGGAAGGTCGACGAGATCATTGCCAAGCTCTCCGAGCA
GCACCGCCTTCAGCCGGGCGACATCATCATGACCGGCACGCCCGCGGGCGTGGGCGCGGTGGTGACCGGAGACGTGCTCG
ACTGCACGATGGAGGGGCTCGAGCCGATGCAGGTCCGCATCGGGCCGAAGGCCGTCTGA

Upstream 100 bases:

>100_bases
CATATCTTGATCTGCCGCCCGATACCGGGAACGCTTTGTCATCACGAGTCGCGGCCGGGAGGGCTGCGGCCCGCACGCGA
CTGTTCAGGAGGAGTGACAG

Downstream 100 bases:

>100_bases
CAGCCGTGGTGCGCGCGGCCGATCTCCTCGCGCTCGGCACGGCGACGCTCGGCGAGGCCTGGCCCGGCGCGCGTCTGCCG
GGCCTGCCGCTCCGCCCGCT

Product: FAA-hydrolase-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MAAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPPVIFMKPADAVVRNGGEIPYPVFTENFHYEC
ELVVVLKSGGYNISVADAASHIYGYAVGLDMTRRDHQKGVLEKGLPWEVTKAFDLSAPIGPVTRAEECGVLTSGQLTLKV
NGEVKQDADIGLMIWKVDEIIAKLSEQHRLQPGDIIMTGTPAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV

Sequences:

>Translated_232_residues
MAAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPPVIFMKPADAVVRNGGEIPYPVFTENFHYEC
ELVVVLKSGGYNISVADAASHIYGYAVGLDMTRRDHQKGVLEKGLPWEVTKAFDLSAPIGPVTRAEECGVLTSGQLTLKV
NGEVKQDADIGLMIWKVDEIIAKLSEQHRLQPGDIIMTGTPAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV
>Mature_231_residues
AAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPPVIFMKPADAVVRNGGEIPYPVFTENFHYECE
LVVVLKSGGYNISVADAASHIYGYAVGLDMTRRDHQKGVLEKGLPWEVTKAFDLSAPIGPVTRAEECGVLTSGQLTLKVN
GEVKQDADIGLMIWKVDEIIAKLSEQHRLQPGDIIMTGTPAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=202, Percent_Identity=38.1188118811881, Blast_Score=147, Evalue=8e-36,
Organism=Homo sapiens, GI66348062, Length=195, Percent_Identity=38.974358974359, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI215422413, Length=195, Percent_Identity=38.974358974359, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI156231349, Length=202, Percent_Identity=33.6633663366337, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI40786394, Length=202, Percent_Identity=33.1683168316832, Blast_Score=114, Evalue=5e-26,
Organism=Escherichia coli, GI1787428, Length=208, Percent_Identity=37.0192307692308, Blast_Score=133, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17557057, Length=188, Percent_Identity=34.0425531914894, Blast_Score=120, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6324161, Length=224, Percent_Identity=32.5892857142857, Blast_Score=126, Evalue=3e-30,
Organism=Drosophila melanogaster, GI28571789, Length=202, Percent_Identity=31.6831683168317, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28572127, Length=203, Percent_Identity=33.4975369458128, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24663695, Length=202, Percent_Identity=30.1980198019802, Blast_Score=81, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 25190; Mature: 25059

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPPVIFMKPADAV
CCEEEECCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCHHH
VRNGGEIPYPVFTENFHYECELVVVLKSGGYNISVADAASHIYGYAVGLDMTRRDHQKGV
HHCCCCCCCCEEECCCCEEEEEEEEEECCCCEEEEHHHHHHHEEEEEECCCCHHHHHCCH
LEKGLPWEVTKAFDLSAPIGPVTRAEECGVLTSGQLTLKVNGEVKQDADIGLMIWKVDEI
HHCCCCEEEEEEEECCCCCCCCCCHHHCCEEECCEEEEEECCCCCCCCCCEEEEEEHHHH
IAKLSEQHRLQPGDIIMTGTPAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV
HHHHHHHHCCCCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
AAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPPVIFMKPADAV
CEEEECCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCHHH
VRNGGEIPYPVFTENFHYECELVVVLKSGGYNISVADAASHIYGYAVGLDMTRRDHQKGV
HHCCCCCCCCEEECCCCEEEEEEEEEECCCCEEEEHHHHHHHEEEEEECCCCHHHHHCCH
LEKGLPWEVTKAFDLSAPIGPVTRAEECGVLTSGQLTLKVNGEVKQDADIGLMIWKVDEI
HHCCCCEEEEEEEECCCCCCCCCCHHHCCEEECCEEEEEECCCCCCCCCCEEEEEEHHHH
IAKLSEQHRLQPGDIIMTGTPAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV
HHHHHHHHCCCCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]