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The map label for this gene is rssB [H]

Identifier: 77465102

GI number: 77465102

Start: 133434

End: 134093

Strand: Reverse

Name: rssB [H]

Synonym: RSP_3088

Alternate gene names: 77465102

Gene position: 134093-133434 (Counterclockwise)

Preceding gene: 77465103

Following gene: 77465101

Centisome position: 14.22

GC content: 69.09

Gene sequence:

>660_bases
ATGCGTATCCTGCTCGTCGAGGATGACCCCGGCCTGGGTGGGGCCATCCGCGACCAGATCAGCGCCGAGGGCCATGCGGC
AGACTGGATGACGGGCGTCGAGGATGCCCTGGCCTCGGTCGCGACCACGGCCTACGATCTCGTGCTGCTCGACCTGAACC
TGCCCGACGGGAGCGGGCTCGACTTCCTGCGCGGGCTCCGCGCCCGGAAGGAGACCATGCCCGTCATCATCCTCACGGCG
CGCGACCGGGTGACGGAGCGGATCGCGGGGCTGAATGCGGGCGCCGACGATTACATGGTCAAGCCGTTCGACCTTTCCGA
ACTGTCCGCCCGGATCGGTGCCGTCTCGCGGCGCTATGCCGGCAATCCCAGCCCGCGCCTCGCGCTCGGCCCGCTGGAGG
TCGACATCGCCGACCGGCGGATCGACGGGCCCGAGGGCGAGGTCACGCTCTCGCAGCGCGAATGGGCGATCTTCGAGGCG
CTCGTGAAGCGGCCGGGATCGGTCGTCTCGAAGACCCAGCTCGAGGAAACGCTCTACGCCTTCGACGCCGAGGTCGAAAG
CAACACGATCGAGGTCTATGTCAGCCGCCTGCGCAAGAAGCTCGGGCGCGACCGGATCGAGACGCGGCGCGGCATGGGCT
ACCGGCTGGTGCGGGAATGA

Upstream 100 bases:

>100_bases
AGCCGGATCCCGCAGGCGCCGCCTTCGCAGGCAGACCGTGCTCCTCCCCTTGACGCTGGCCGCCGCCTCGGCCCACCTAG
ACGCAACGAAGGAGGACGGG

Downstream 100 bases:

>100_bases
GCCGACCGCGCAGCCTGCGGCGCGAGCTCGCGCTGGGGCTGTCGGGCGCGATCGTCCTGCTCTGGACGGTGGCCACCCTG
TCGGCCGCCTATGTGGTGCG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGLDFLRGLRARKETMPVIILTA
RDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYAGNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEA
LVKRPGSVVSKTQLEETLYAFDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE

Sequences:

>Translated_219_residues
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGLDFLRGLRARKETMPVIILTA
RDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYAGNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEA
LVKRPGSVVSKTQLEETLYAFDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE
>Mature_219_residues
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGLDFLRGLRARKETMPVIILTA
RDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYAGNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEA
LVKRPGSVVSKTQLEETLYAFDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=43.778801843318, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=44.7004608294931, Blast_Score=170, Evalue=5e-44,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=37.8995433789954, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=34.6846846846847, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=32.579185520362, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=34.3891402714932, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=32.1266968325792, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=33.7837837837838, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=32.4561403508772, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=33.6322869955157, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=32, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=29.9145299145299, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=31.8777292576419, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=26.6375545851528, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=32.4074074074074, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790299, Length=124, Percent_Identity=26.6129032258064, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24170; Mature: 24170

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGL
CEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCH
DFLRGLRARKETMPVIILTARDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYA
HHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEALVKRPGSVVSKTQLEETLYA
CCCCCCEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE
HCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGL
CEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCH
DFLRGLRARKETMPVIILTARDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYA
HHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEALVKRPGSVVSKTQLEETLYA
CCCCCCEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE
HCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA