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The map label for this gene is erfK [C]

Identifier: 77465087

GI number: 77465087

Start: 114199

End: 114750

Strand: Direct

Name: erfK [C]

Synonym: RSP_3073

Alternate gene names: 77465087

Gene position: 114199-114750 (Clockwise)

Preceding gene: 77465084

Following gene: 77465089

Centisome position: 12.11

GC content: 66.85

Gene sequence:

>552_bases
ATGAGAACCATCAGCCGACGCAACGCGCTGGGACTGGGCATCGCCGCCGCGGGAGGCCTCCTCCTGCCGGCTCAGGGACA
GGCGCAGGTGCATCGGGCCAACGTCTCGTCCTTCCGGATGCAGAGCTGGGAAGAGCATTTCGACAGTCTCGGCAAGGGCG
CCATCGTGGCCGACACCACGTCGCGCGCGCTGCATTTCTGGAGCGGCGACGGGCGGGACTACCGGATCTATCCGACCTCG
GTGCCGATCTCGGAAGAGCTGACCAAGCGCGGCTATACCGAGATCGTGCGCAAGAAGGTCGGGCCGTCGTGGACGCCCAC
ACCCTCGCAGATGGAGCGCTATCCCGACTGGAAGCCCGTCGGCCCGGGTCCCGAGAACCCGCTCGGCACCCATGCGATGT
ATCTGGGCTGGCCCGCCTACATCATCCACGGCACCCACGACACGCGGAAGATCGGCCGCCCCTCGTCGGACGGCTGCATC
GGGCTCTACAACGAGAAGATCGCGGAGCTGTTCGAGCTCTGCCCGATCGGCACGCAGGTCCGGGTGATCTGA

Upstream 100 bases:

>100_bases
GTGAGGCGGGCCTGCTCCGTGCCTGCGGGGGGGCGCGCCTTAAGCTCGGCTTAAGCTCCGGCCCCGAAGCGGGCGCAAAG
GCAATATCAGGAGCAGAGAC

Downstream 100 bases:

>100_bases
GGCGACGGGCCCCGCGCAGGCCGGCCCGGGCCGGTCTGCGCGGGGCGGTGAGATGCGGGCGAACCACTCGTCACGGGGAT
ATCTGAGGCGGACCCTGCTC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRTISRRNALGLGIAAAGGLLLPAQGQAQVHRANVSSFRMQSWEEHFDSLGKGAIVADTTSRALHFWSGDGRDYRIYPTS
VPISEELTKRGYTEIVRKKVGPSWTPTPSQMERYPDWKPVGPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCI
GLYNEKIAELFELCPIGTQVRVI

Sequences:

>Translated_183_residues
MRTISRRNALGLGIAAAGGLLLPAQGQAQVHRANVSSFRMQSWEEHFDSLGKGAIVADTTSRALHFWSGDGRDYRIYPTS
VPISEELTKRGYTEIVRKKVGPSWTPTPSQMERYPDWKPVGPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCI
GLYNEKIAELFELCPIGTQVRVI
>Mature_183_residues
MRTISRRNALGLGIAAAGGLLLPAQGQAQVHRANVSSFRMQSWEEHFDSLGKGAIVADTTSRALHFWSGDGRDYRIYPTS
VPISEELTKRGYTEIVRKKVGPSWTPTPSQMERYPDWKPVGPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCI
GLYNEKIAELFELCPIGTQVRVI

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=144, Percent_Identity=35.4166666666667, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787040, Length=142, Percent_Identity=34.5070422535211, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787968, Length=136, Percent_Identity=32.3529411764706, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311
- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 20244; Mature: 20244

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTISRRNALGLGIAAAGGLLLPAQGQAQVHRANVSSFRMQSWEEHFDSLGKGAIVADTT
CCCCCCCCCCEEEEECCCCEEECCCCCCEEEHHCHHHHHHHHHHHHHHHHCCCEEEEECC
SRALHFWSGDGRDYRIYPTSVPISEELTKRGYTEIVRKKVGPSWTPTPSQMERYPDWKPV
CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
GPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCIGLYNEKIAELFELCPIGTQV
CCCCCCCCCCCEEEECCEEEEEECCCCHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCEE
RVI
EEC
>Mature Secondary Structure
MRTISRRNALGLGIAAAGGLLLPAQGQAQVHRANVSSFRMQSWEEHFDSLGKGAIVADTT
CCCCCCCCCCEEEEECCCCEEECCCCCCEEEHHCHHHHHHHHHHHHHHHHCCCEEEEECC
SRALHFWSGDGRDYRIYPTSVPISEELTKRGYTEIVRKKVGPSWTPTPSQMERYPDWKPV
CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
GPGPENPLGTHAMYLGWPAYIIHGTHDTRKIGRPSSDGCIGLYNEKIAELFELCPIGTQV
CCCCCCCCCCCEEEECCEEEEEECCCCHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCEE
RVI
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6209404 [H]