| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465029
Identifier: 77465029
GI number: 77465029
Start: 48026
End: 48889
Strand: Reverse
Name: 77465029
Synonym: RSP_3016
Alternate gene names: NA
Gene position: 48889-48026 (Counterclockwise)
Preceding gene: 77465030
Following gene: 77465028
Centisome position: 5.18
GC content: 69.1
Gene sequence:
>864_bases ATGACGACGACGCGCATCCTTGGGCTCGCGGCACTCGCGCTGAGCCTTGCGGCCCCGGCCCGGGCCATCGATGTCGGCCC GGCGGATTACACGATCCTGCCCGGCGGCACCACGCTGGGCATGGTCTACTGGCAGCACCTGAGCTCCGACACGCTGCGGC TGGACGGAGCAGAGGTGCCGGGTTCCTCCTTCGAGGCCAACATCGGCATCCTGCGCACGCTGAGCTACTTCGACATGGGC GAGACCCCGGCCGTGTTCCATGTGGTCGCGCCCTTCGCCGGCCTCGACGCCGACATAGGCGGCGTCGGGCAGCGCACCAG CGACGGGCTGGGCGATCTGACGCTCGGCCTGACCGTCTGGCCCGTGCAGCCGGACAGCCCCGAGACCGGCACCACGCTGG GCCTGTCGCTCTTCGCGACGCTGCCGACGGGCGACTACGATCCGGCCCGCATGGGTCTTGGCGAGGGCACCTGGACGATC ACCCCCCAGATCGGGCTGATCCAGGGCCTCGGCCACGGTTTCTACTTCGACGGCGCGCTGGACGTCGCCCTCCAGCGCGA TCACGACGAGGATGGCATGAACCATGAGCGCACTCCGTCCTGGCAGCTTCAGGCCATGCTGCGCAAGCAGTGGGGGTCCA CCACCTCGCTCGCGGTGGGCTATTCCGGCCAGCGCGGCGGCGCGCAGAGCATCGGCGGCACCGAGACCGGTCTCAAGACT CACCGCGACCAGCTCCGGATCTACGGCAGCCACTTCGTCACCCCCACGGTGCAGGTGCAGGGCATGTATGGCCGCGACCT GAAGGTCGAGGGCGGCTTCGACTACGACAGCGTGGCCCAGATCCGGATCGTCAAGGTGTTCTGA
Upstream 100 bases:
>100_bases GCTGCTGTTTCACCGGGGCGCCTATTCCATGGCACGGCCGCATCCGCAGGTCGCAGCCTCCTGAACCACCACCGTCAACG ACAACAGGGAGGAGACCTGA
Downstream 100 bases:
>100_bases CATACGCCTGGCCCGGCACTGCTCCGGGCCAGGCCCTTTCAACAAGGCCGTGCCTTCATGAAGAAGACCATCATTTCCTG CGCCGTCACGGGCTCGATCC
Product: phenol degradation enzyme
Products: NA
Alternate protein names: Phenol Degradation; Quinohemoprotein Alcohol Dehydrogenase; Meta-Pathway Phenol Degradation-Like Protein; QbdB Protein; Signal Peptide-Containing Protein; Alcohol Dehydrogenase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTTTRILGLAALALSLAAPARAIDVGPADYTILPGGTTLGMVYWQHLSSDTLRLDGAEVPGSSFEANIGILRTLSYFDMG ETPAVFHVVAPFAGLDADIGGVGQRTSDGLGDLTLGLTVWPVQPDSPETGTTLGLSLFATLPTGDYDPARMGLGEGTWTI TPQIGLIQGLGHGFYFDGALDVALQRDHDEDGMNHERTPSWQLQAMLRKQWGSTTSLAVGYSGQRGGAQSIGGTETGLKT HRDQLRIYGSHFVTPTVQVQGMYGRDLKVEGGFDYDSVAQIRIVKVF
Sequences:
>Translated_287_residues MTTTRILGLAALALSLAAPARAIDVGPADYTILPGGTTLGMVYWQHLSSDTLRLDGAEVPGSSFEANIGILRTLSYFDMG ETPAVFHVVAPFAGLDADIGGVGQRTSDGLGDLTLGLTVWPVQPDSPETGTTLGLSLFATLPTGDYDPARMGLGEGTWTI TPQIGLIQGLGHGFYFDGALDVALQRDHDEDGMNHERTPSWQLQAMLRKQWGSTTSLAVGYSGQRGGAQSIGGTETGLKT HRDQLRIYGSHFVTPTVQVQGMYGRDLKVEGGFDYDSVAQIRIVKVF >Mature_286_residues TTTRILGLAALALSLAAPARAIDVGPADYTILPGGTTLGMVYWQHLSSDTLRLDGAEVPGSSFEANIGILRTLSYFDMGE TPAVFHVVAPFAGLDADIGGVGQRTSDGLGDLTLGLTVWPVQPDSPETGTTLGLSLFATLPTGDYDPARMGLGEGTWTIT PQIGLIQGLGHGFYFDGALDVALQRDHDEDGMNHERTPSWQLQAMLRKQWGSTTSLAVGYSGQRGGAQSIGGTETGLKTH RDQLRIYGSHFVTPTVQVQGMYGRDLKVEGGFDYDSVAQIRIVKVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30560; Mature: 30429
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTRILGLAALALSLAAPARAIDVGPADYTILPGGTTLGMVYWQHLSSDTLRLDGAEVP CCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEHHHHHHHCCCCEEEECCCCCC GSSFEANIGILRTLSYFDMGETPAVFHVVAPFAGLDADIGGVGQRTSDGLGDLTLGLTVW CCCCCCCCEEEEEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEE PVQPDSPETGTTLGLSLFATLPTGDYDPARMGLGEGTWTITPQIGLIQGLGHGFYFDGAL ECCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCCCCEEEECCCHHHHHHCCCCEEECCEE DVALQRDHDEDGMNHERTPSWQLQAMLRKQWGSTTSLAVGYSGQRGGAQSIGGTETGLKT EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHH HRDQLRIYGSHFVTPTVQVQGMYGRDLKVEGGFDYDSVAQIRIVKVF CCCCEEEEECEECCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEC >Mature Secondary Structure TTTRILGLAALALSLAAPARAIDVGPADYTILPGGTTLGMVYWQHLSSDTLRLDGAEVP CCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEHHHHHHHCCCCEEEECCCCCC GSSFEANIGILRTLSYFDMGETPAVFHVVAPFAGLDADIGGVGQRTSDGLGDLTLGLTVW CCCCCCCCEEEEEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEE PVQPDSPETGTTLGLSLFATLPTGDYDPARMGLGEGTWTITPQIGLIQGLGHGFYFDGAL ECCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCCCCEEEECCCHHHHHHCCCCEEECCEE DVALQRDHDEDGMNHERTPSWQLQAMLRKQWGSTTSLAVGYSGQRGGAQSIGGTETGLKT EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHH HRDQLRIYGSHFVTPTVQVQGMYGRDLKVEGGFDYDSVAQIRIVKVF CCCCEEEEECEECCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA