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The map label for this gene is ytcJ [H]

Identifier: 77465019

GI number: 77465019

Start: 31518

End: 33170

Strand: Direct

Name: ytcJ [H]

Synonym: RSP_3836

Alternate gene names: 77465019

Gene position: 31518-33170 (Clockwise)

Preceding gene: 77465018

Following gene: 77465021

Centisome position: 3.34

GC content: 72.41

Gene sequence:

>1653_bases
ATGACCGATCTCATCGTCACCAACGGGGCCGTCCTGACCATGGATCCCGCCCGGCCCGAGGCCGAAGCCGTGGCCGTCGC
GGACGGCCGGATCACGGCCGTGGGCAGCCGCGCCGAGATCGAGCGGCTGGCCGGGCCGCGGACGGACATGATCGATGCGG
GCGGAGGGACGGTTCTGCCGGGCTTCGTGGAAAGCCATCTCCATTTGGTGCTGGGCGGGGCGGAACTGGCCCATCTCCAG
CTCGCGGGCGTCCATGGCGTCGAGGCGCTGACGCGGGCGGCGCAGAGCTTTGCGGCGGCCCATCCCGACCGTCCGCTGCT
CATGGCGCAGGGCGGCGACTACGGGCTGCTCGACCGGCCGATGACGCGGCAGGATCTCGACGCGATCCTGCCCGACCGGC
CCTTCGCCATTACCGCGCCCGATCATCACACGGTCTGGGCCAACACGGCCGCCCTGCGCGCGGCGGGGCTCATCGAGGGG
GCATCCATGCCGCACGGGCATGAGGTGGTGATGGGGGCGGACGGGCGCGCCACCGGAGAACTGAGGGAATTCGAGGCCTT
CGCCCCGGTGATCGCGCTCGGCGGCGAAGCGCGGCTCAATCTCGGCATTGCCACCGGCGAGGAGCCCTCGCCCTGGCCCG
ACGCGGCCGAGCGCGCCATCGACCGCGCCAAGATCGCCCGCGGCCTCGCCCATTGCGCGGCTCACGGCATCACCTCGATG
GTGAACATGGACGGCAACCGCTACACGCTGGAACTGCTGCGCGAGCTGCAGCGGGCGGGCGGCCTCACCGCGCGGATCCG
GGTGCCGTTCCATTTCAAGCCGCATATGGCGCTGGCCGATCTGGCCCGCGCCGAGGCCATGACGCGCGATTTCGACGACG
ACTGGCTGGCCTGCAATTTCGTGAAGATGTTCATGGACGGGGTGCTCGACAGCGGCACGGCCTACCGGCTCGACGATTAT
CCGGACGCGCCGGGCTGGCGTTCGGAACCGCTGTTCGAGCCCGCCCGATTTGCCGAGATCGCGACGGCGGTGGACCGGAG
GGGGCTGCAGATCGCGGTCCATGCCATCGGCTGCGGGGCGGTGCGCACCACGCTCGACGGCTATGCGGCGGCGCGGGCCG
CCAACGGCGCGCGCGACAGCCGGCACCGGATCGAACATATCGAACTGATCGACCGGGCGGATATTCCGCGCCTCGCCGCA
CTCGGGGTGGTGGCGAGCCTCCAGCCGCCCCATCCGCCGGGCGCGATGGATTTCCCGCTCCAGCCCACTTTGGACCGGAT
CGGCCGGAGCCGCTGGCCCGACGCCTATCTCTGCCGCACTTTGGCCGAGGCGGGTGCGCCCGTCGTCTTCGCCTCGGACT
GGCCGGTGACCGATGTCTCGGTGCTGCGCGGCCTGCAGGCGGCGCTGACGCGGCGGCCCTACGAGGGCGCGGCCGACGAG
CGCCTGACGCTGGCCGAGAGTCTGCGCGCCTATACGGCCGGCGGCGCCTGGGCCAACCACCGCGAGCGGCTGACCGGCAC
GCTCCGGGCCGGGCTCGCGGCCGATCTGGCGATCCTCGACGGGCGGCTGGAGGCTCGGGCGGCCGACTCGCTGGGGTCTC
TGGGCGTCGCGCGCACCCTCTGCGGCGGCCGGACGACTCACCGGAGGCTCTGA

Upstream 100 bases:

>100_bases
ATCCGCCGGGCGGCGCGTCCTCCCGCGGGGTCTCGATCCTGCTGGAACTTCTCCGGGTGATCCCGAGCTGCGCCGGGACG
CCGGCCGAAGGACGCGCCGC

Downstream 100 bases:

>100_bases
GTCGCCGCGCAGGTCGGGCGAAAGGGGCGGGTCGCCGGCTCCGCGGCAACGAAAAACGCCAAGATTTCTTGGCTGCGACA
TGAAATTGTTACGGAGCCCA

Product: putative metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MTDLIVTNGAVLTMDPARPEAEAVAVADGRITAVGSRAEIERLAGPRTDMIDAGGGTVLPGFVESHLHLVLGGAELAHLQ
LAGVHGVEALTRAAQSFAAAHPDRPLLMAQGGDYGLLDRPMTRQDLDAILPDRPFAITAPDHHTVWANTAALRAAGLIEG
ASMPHGHEVVMGADGRATGELREFEAFAPVIALGGEARLNLGIATGEEPSPWPDAAERAIDRAKIARGLAHCAAHGITSM
VNMDGNRYTLELLRELQRAGGLTARIRVPFHFKPHMALADLARAEAMTRDFDDDWLACNFVKMFMDGVLDSGTAYRLDDY
PDAPGWRSEPLFEPARFAEIATAVDRRGLQIAVHAIGCGAVRTTLDGYAAARAANGARDSRHRIEHIELIDRADIPRLAA
LGVVASLQPPHPPGAMDFPLQPTLDRIGRSRWPDAYLCRTLAEAGAPVVFASDWPVTDVSVLRGLQAALTRRPYEGAADE
RLTLAESLRAYTAGGAWANHRERLTGTLRAGLAADLAILDGRLEARAADSLGSLGVARTLCGGRTTHRRL

Sequences:

>Translated_550_residues
MTDLIVTNGAVLTMDPARPEAEAVAVADGRITAVGSRAEIERLAGPRTDMIDAGGGTVLPGFVESHLHLVLGGAELAHLQ
LAGVHGVEALTRAAQSFAAAHPDRPLLMAQGGDYGLLDRPMTRQDLDAILPDRPFAITAPDHHTVWANTAALRAAGLIEG
ASMPHGHEVVMGADGRATGELREFEAFAPVIALGGEARLNLGIATGEEPSPWPDAAERAIDRAKIARGLAHCAAHGITSM
VNMDGNRYTLELLRELQRAGGLTARIRVPFHFKPHMALADLARAEAMTRDFDDDWLACNFVKMFMDGVLDSGTAYRLDDY
PDAPGWRSEPLFEPARFAEIATAVDRRGLQIAVHAIGCGAVRTTLDGYAAARAANGARDSRHRIEHIELIDRADIPRLAA
LGVVASLQPPHPPGAMDFPLQPTLDRIGRSRWPDAYLCRTLAEAGAPVVFASDWPVTDVSVLRGLQAALTRRPYEGAADE
RLTLAESLRAYTAGGAWANHRERLTGTLRAGLAADLAILDGRLEARAADSLGSLGVARTLCGGRTTHRRL
>Mature_549_residues
TDLIVTNGAVLTMDPARPEAEAVAVADGRITAVGSRAEIERLAGPRTDMIDAGGGTVLPGFVESHLHLVLGGAELAHLQL
AGVHGVEALTRAAQSFAAAHPDRPLLMAQGGDYGLLDRPMTRQDLDAILPDRPFAITAPDHHTVWANTAALRAAGLIEGA
SMPHGHEVVMGADGRATGELREFEAFAPVIALGGEARLNLGIATGEEPSPWPDAAERAIDRAKIARGLAHCAAHGITSMV
NMDGNRYTLELLRELQRAGGLTARIRVPFHFKPHMALADLARAEAMTRDFDDDWLACNFVKMFMDGVLDSGTAYRLDDYP
DAPGWRSEPLFEPARFAEIATAVDRRGLQIAVHAIGCGAVRTTLDGYAAARAANGARDSRHRIEHIELIDRADIPRLAAL
GVVASLQPPHPPGAMDFPLQPTLDRIGRSRWPDAYLCRTLAEAGAPVVFASDWPVTDVSVLRGLQAALTRRPYEGAADER
LTLAESLRAYTAGGAWANHRERLTGTLRAGLAADLAILDGRLEARAADSLGSLGVARTLCGGRTTHRRL

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58716; Mature: 58585

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLIVTNGAVLTMDPARPEAEAVAVADGRITAVGSRAEIERLAGPRTDMIDAGGGTVLP
CCCEEEECCEEEEECCCCCCCCEEEEECCEEEEECCHHHHHHHCCCCCCEEECCCCCCCC
GFVESHLHLVLGGAELAHLQLAGVHGVEALTRAAQSFAAAHPDRPLLMAQGGDYGLLDRP
HHHHCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
MTRQDLDAILPDRPFAITAPDHHTVWANTAALRAAGLIEGASMPHGHEVVMGADGRATGE
CCHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCH
LREFEAFAPVIALGGEARLNLGIATGEEPSPWPDAAERAIDRAKIARGLAHCAAHGITSM
HHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNMDGNRYTLELLRELQRAGGLTARIRVPFHFKPHMALADLARAEAMTRDFDDDWLACNF
EECCCCCHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH
VKMFMDGVLDSGTAYRLDDYPDAPGWRSEPLFEPARFAEIATAVDRRGLQIAVHAIGCGA
HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCH
VRTTLDGYAAARAANGARDSRHRIEHIELIDRADIPRLAALGVVASLQPPHPPGAMDFPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
QPTLDRIGRSRWPDAYLCRTLAEAGAPVVFASDWPVTDVSVLRGLQAALTRRPYEGAADE
CHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCH
RLTLAESLRAYTAGGAWANHRERLTGTLRAGLAADLAILDGRLEARAADSLGSLGVARTL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CGGRTTHRRL
HCCCCCCCCC
>Mature Secondary Structure 
TDLIVTNGAVLTMDPARPEAEAVAVADGRITAVGSRAEIERLAGPRTDMIDAGGGTVLP
CCEEEECCEEEEECCCCCCCCEEEEECCEEEEECCHHHHHHHCCCCCCEEECCCCCCCC
GFVESHLHLVLGGAELAHLQLAGVHGVEALTRAAQSFAAAHPDRPLLMAQGGDYGLLDRP
HHHHCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
MTRQDLDAILPDRPFAITAPDHHTVWANTAALRAAGLIEGASMPHGHEVVMGADGRATGE
CCHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCH
LREFEAFAPVIALGGEARLNLGIATGEEPSPWPDAAERAIDRAKIARGLAHCAAHGITSM
HHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNMDGNRYTLELLRELQRAGGLTARIRVPFHFKPHMALADLARAEAMTRDFDDDWLACNF
EECCCCCHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH
VKMFMDGVLDSGTAYRLDDYPDAPGWRSEPLFEPARFAEIATAVDRRGLQIAVHAIGCGA
HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCH
VRTTLDGYAAARAANGARDSRHRIEHIELIDRADIPRLAALGVVASLQPPHPPGAMDFPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
QPTLDRIGRSRWPDAYLCRTLAEAGAPVVFASDWPVTDVSVLRGLQAALTRRPYEGAADE
CHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCH
RLTLAESLRAYTAGGAWANHRERLTGTLRAGLAADLAILDGRLEARAADSLGSLGVARTL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CGGRTTHRRL
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]