| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461781
Identifier: 77461781
GI number: 77461781
Start: 6228276
End: 6229676
Strand: Direct
Name: 77461781
Synonym: Pfl01_5560
Alternate gene names: NA
Gene position: 6228276-6229676 (Clockwise)
Preceding gene: 77461780
Following gene: 77461783
Centisome position: 96.74
GC content: 64.74
Gene sequence:
>1401_bases ATGACCGAAGCTGCTCTCGCCCCCGAATCACCGCACGCTCCGTCTGTTATTCGGCTGCTGCTCAACAAGCTGGGCGTCGC CTACGAAGAAGTGCTCGACCACCACGGCCTCAACGCCTCGCGCAAAGTGCAGGCGGTGTTGCTGGACGACGCGGTCGGTG CGCTGATGGTGCTGTTTCCACAGAGCCAGCTGCTGGATCTCAACCGCCTCGCCGAACTGACGGGCCGTCGCCTGACCGCC GTGTCCACCGAGCGCCTGGAAAAGATGCTCGGCAAACACAGCCTGAGCCTGTTGCCGGGCCTGCCGGCGCTGACCAGTTC GCCGTGCCTCTACGAAGAAAGCCTGCTGCGTGAACCGAAGTTGCTGATCAACTCCGGCGAGCCGGGCCTGCTGCTGGAAA TCGCCAGCGAAGACTTCAAGACCATGCTGACCAAGGCCAGCGCCGCCAACTTCGGCGAAGCCCTGAGCAGCATCCGCCCG AACCTCGACCGCCCGGACGATGACCGCGAGGAAATCACCCAGGCCGTTCAGGCGTTCACCGCGAGACGCATCCAGCAGCG TCTGGAAGCGACCATCGAGATTCCACCGCTGGCCGAAACCGCACAAAAAATCATCAAGCTGCGCGTCGACCCCAATGCCA CCATCGACGACATCACCGGCGTGGTCGAAACCGACCCGGCGCTGGCTGCGCAAGTGGTGAGCTGGGCGGCGTCGCCGTAC TACGCGTCGCCGGGCAAGATCCGTTCGGTGGAAGACGCGATCGTCCGCGTACTGGGCTTCGATCTGGTAATCAACCTGGC GCTGGGCCTGGCCCTCGGCAAGACCCTGAGCCTGCCGAAAGACCACCCGCAACACACCACGCCGTACTGGCAGCAGTCGA TCTACACCGCCGCCGTCATCGAAGGCCTGACCCGCGCCATGCCGCGTGCCCAGCGTCCGGAATCCGGCCTGACCTACCTC GCCGGCCTGCTGCACAACTTCGGCTACCTGCTGCTGGCCCACGTGTTCCCGCCGCACTTCTCGCTGATCTGCCGCCACCT GGAGGTCAACCCGCACCTGTGCCACAGCTATGTCGAGCAACACCTGCTGGGCATCAGCCGCGAACAGATCGGCTCCTGGC TGATGCGCTACTGGGACATGCCGGACGAACTGGCCACCGCTCTGCGCTTCCAGCACGACCCGAACTACGACGGCGCCTAC GCCGAATACCCGAACCTCGTCTGCCTGGCCGTGCGCCTGCTGCGCAGTCGCGGGATCGGCTCCGGCCCGGATGAAGACAT TCCGGATGCGCTGCTGGAACGCGTTGGCCTGAGCCGCGACAAGGCCAATGACGTCGTGAGCAAAGTGCTTGAGGCAGAAG TGTTGCTGCGGGAACTGGCTTCGCAGTTCAGCCAGGCCTGA
Upstream 100 bases:
>100_bases CAGCAATACGGCCAAGTGTGAGCACCGTCGCAGTTTCTGACAGCTCGTTCCAACCAAGCTGGTTATACTCCAGCAATTGT TTCAAAAACGGATACAGACC
Downstream 100 bases:
>100_bases TTCGCGCCCATAAAAAAGGCCCCACACTCAACCGAGTGTGGGGCCTTTGTATTTGATCGTTCCCACGCTCTGCGTGGGAA TGCAGCCCGTAACGCTCCGC
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTEAALAPESPHAPSVIRLLLNKLGVAYEEVLDHHGLNASRKVQAVLLDDAVGALMVLFPQSQLLDLNRLAELTGRRLTA VSTERLEKMLGKHSLSLLPGLPALTSSPCLYEESLLREPKLLINSGEPGLLLEIASEDFKTMLTKASAANFGEALSSIRP NLDRPDDDREEITQAVQAFTARRIQQRLEATIEIPPLAETAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPY YASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPQHTTPYWQQSIYTAAVIEGLTRAMPRAQRPESGLTYL AGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHLLGISREQIGSWLMRYWDMPDELATALRFQHDPNYDGAY AEYPNLVCLAVRLLRSRGIGSGPDEDIPDALLERVGLSRDKANDVVSKVLEAEVLLRELASQFSQA
Sequences:
>Translated_466_residues MTEAALAPESPHAPSVIRLLLNKLGVAYEEVLDHHGLNASRKVQAVLLDDAVGALMVLFPQSQLLDLNRLAELTGRRLTA VSTERLEKMLGKHSLSLLPGLPALTSSPCLYEESLLREPKLLINSGEPGLLLEIASEDFKTMLTKASAANFGEALSSIRP NLDRPDDDREEITQAVQAFTARRIQQRLEATIEIPPLAETAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPY YASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPQHTTPYWQQSIYTAAVIEGLTRAMPRAQRPESGLTYL AGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHLLGISREQIGSWLMRYWDMPDELATALRFQHDPNYDGAY AEYPNLVCLAVRLLRSRGIGSGPDEDIPDALLERVGLSRDKANDVVSKVLEAEVLLRELASQFSQA >Mature_465_residues TEAALAPESPHAPSVIRLLLNKLGVAYEEVLDHHGLNASRKVQAVLLDDAVGALMVLFPQSQLLDLNRLAELTGRRLTAV STERLEKMLGKHSLSLLPGLPALTSSPCLYEESLLREPKLLINSGEPGLLLEIASEDFKTMLTKASAANFGEALSSIRPN LDRPDDDREEITQAVQAFTARRIQQRLEATIEIPPLAETAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPYY ASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPQHTTPYWQQSIYTAAVIEGLTRAMPRAQRPESGLTYLA GLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHLLGISREQIGSWLMRYWDMPDELATALRFQHDPNYDGAYA EYPNLVCLAVRLLRSRGIGSGPDEDIPDALLERVGLSRDKANDVVSKVLEAEVLLRELASQFSQA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 51330; Mature: 51198
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAALAPESPHAPSVIRLLLNKLGVAYEEVLDHHGLNASRKVQAVLLDDAVGALMVLFP CCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC QSQLLDLNRLAELTGRRLTAVSTERLEKMLGKHSLSLLPGLPALTSSPCLYEESLLREPK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC LLINSGEPGLLLEIASEDFKTMLTKASAANFGEALSSIRPNLDRPDDDREEITQAVQAFT CEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARRIQQRLEATIEIPPLAETAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPY HHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC YASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPQHTTPYWQQSIYTAAVI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EGLTRAMPRAQRPESGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQ HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH HLLGISREQIGSWLMRYWDMPDELATALRFQHDPNYDGAYAEYPNLVCLAVRLLRSRGIG HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCCC SGPDEDIPDALLERVGLSRDKANDVVSKVLEAEVLLRELASQFSQA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEAALAPESPHAPSVIRLLLNKLGVAYEEVLDHHGLNASRKVQAVLLDDAVGALMVLFP CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC QSQLLDLNRLAELTGRRLTAVSTERLEKMLGKHSLSLLPGLPALTSSPCLYEESLLREPK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC LLINSGEPGLLLEIASEDFKTMLTKASAANFGEALSSIRPNLDRPDDDREEITQAVQAFT CEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARRIQQRLEATIEIPPLAETAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPY HHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC YASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPQHTTPYWQQSIYTAAVI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EGLTRAMPRAQRPESGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQ HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH HLLGISREQIGSWLMRYWDMPDELATALRFQHDPNYDGAYAEYPNLVCLAVRLLRSRGIG HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCCC SGPDEDIPDALLERVGLSRDKANDVVSKVLEAEVLLRELASQFSQA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]